{
    "graph_id": "Reactome_Automat",
    "graph_name": "Reactome",
    "graph_description": "REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic and clinical research, genome analysis, modeling, systems biology and education.",
    "graph_url": "https://reactome.org/",
    "graph_version": "d7df62d3266ae128",
    "sources": [
        {
            "source_id": "Reactome",
            "source_version": "V86",
            "release_version": "7e8395a4b02d0213",
            "parsing_version": "1.1",
            "supplementation_version": "1.0",
            "normalization_scheme": {
                "node_normalization_version": "2.3.1",
                "edge_normalization_version": "v3.5.4",
                "normalization_code_version": "1.0",
                "conflation": false,
                "strict": true
            },
            "merge_strategy": "default",
            "normalization_version": "2.3.1_v3.5.4_1.0_strict",
            "provenance": "infores:reactome",
            "description": "Reactome is a free, open-source, curated and peer-reviewed pathway database",
            "source_data_url": "https://reactome.org/",
            "license": "https://reactome.org/license",
            "attribution": "https://academic.oup.com/nar/article/50/D1/D687/6426058?login=false",
            "normalized_nodes.jsonl": {
                "nodes": 129488
            },
            "normalized_edges.jsonl": {
                "edges": 516723
            }
        },
        {
            "source_id": "OntologicalHierarchy",
            "source_version": "2023-11-19",
            "release_version": "b65fc63ed6bed772",
            "parsing_version": "1.5",
            "supplementation_version": "1.0",
            "normalization_scheme": {
                "node_normalization_version": "2.3.1",
                "edge_normalization_version": "v3.5.4",
                "normalization_code_version": "1.0",
                "conflation": false,
                "strict": true
            },
            "merge_strategy": "connected_edge_subset",
            "normalization_version": "2.3.1_v3.5.4_1.0_strict",
            "provenance": "infores:ubergraph",
            "description": "Subclass relationships from the redundant version of Ubergraph.",
            "source_data_url": "https://github.com/INCATools/ubergraph",
            "license": "https://raw.githubusercontent.com/INCATools/ubergraph/master/LICENSE.txt",
            "attribution": "https://github.com/INCATools/ubergraph",
            "normalized_nodes.jsonl": {
                "nodes": 435420
            },
            "normalized_edges.jsonl": {
                "edges": 1855072
            }
        }
    ],
    "subgraphs": [],
    "build_status": "stable",
    "build_time": "12-13-23 07:22:16",
    "build_error": null,
    "final_node_count": 564908,
    "final_edge_count": 2371795,
    "merged_nodes": 0,
    "merged_edges": 0,
    "qc_results": {
        "pass": true,
        "primary_knowledge_sources": [
            "infores:reactome",
            "infores:ubergraph"
        ],
        "aggregator_knowledge_sources": [],
        "predicates": {
            "biolink:occurs_in": 258521,
            "biolink:has_input": 95926,
            "biolink:has_output": 76318,
            "biolink:precedes": 67143,
            "biolink:subclass_of": 1870346,
            "biolink:located_in": 36,
            "biolink:disease_has_basis_in": 2710,
            "biolink:has_part": 600,
            "biolink:regulates": 195
        },
        "node_curie_prefixes": {
            "GO": 18927,
            "REACT": 108850,
            "PUBCHEM.COMPOUND": 140818,
            "CHEBI": 23454,
            "CHEMBL.COMPOUND": 336,
            "KEGG.COMPOUND": 6,
            "UNII": 214,
            "UniProtKB": 179582,
            "NCBIGene": 697,
            "ENSEMBL": 1,
            "CL": 367,
            "MONDO": 23056,
            "PR": 54690,
            "UMLS": 10880,
            "HP": 2952,
            "UBERON": 16,
            "DOID": 13,
            "NCIT": 47,
            "OMIM": 1,
            "EFO": 1
        },
        "edges_with_publications": {},
        "edge_properties": [
            "qualified_predicate",
            "biolink:primary_knowledge_source",
            "complex_context",
            "object_aspect_qualifier",
            "predicate",
            "object",
            "object_direction_qualifier",
            "subject"
        ],
        "warnings": {}
    },
    "neo4j_dump": "https://stars.renci.org/var/plater/bl-3.5.4/Reactome_Automat/d7df62d3266ae128/graph_d7df62d3266ae128.db.dump"
}