ERBB3-ERBB4 signaling pathway

category: biolink:Pathway biolink:OntologyClass biolink:BiologicalProcess biolink:Occurrent biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors ERBB3 and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.


name: cystathionine gamma-lyase cysteinylated 1 (human)

description: A cystathionine gamma-lyase (human) that has been cysteinylated on the residue at the position equivalent to Cys-109 of the amino acid sequence represented by UniProtKB:P32929-1. Example: UniProtKB:P32929-1, Cys-109, MOD:00765.


name: tyrosine 3-monooxygenase phosphorylated 1 (rat)

description: A tyrosine 3-monooxygenase phosphorylated 1 in rat. UniProtKB:P04177, Ser-31, MOD:00046.


enterocyte of anorectum

category: biolink:Cell biolink:AnatomicalEntity biolink:PhysicalEssence biolink:OrganismalEntity biolink:SubjectOfInvestigation biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: An enterocyte that is located in the anorectum.


RAFFINOSE

A trisaccharide composed of alpha-D-galactopyranose, alpha-D-glucopyranose and beta-D-fructofuranose joined in sequence by 1->6 and 1<->2 glycosidic linkages, respectively.


A 1-methylxanthine tautomer where the imidazole proton is located at the 7-position.


adenosine 5'-phosphoramidate

The phosphoramadite analogue of AMP.


spinal intradural arachnoid cysts

category: biolink:Disease biolink:DiseaseOrPhenotypicFeature biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing

description: Spinal intradural arachnoid cysts are cerebrospinal fluid -filled sacs that are located between the spinal cord and the arachnoid membrane (one of the three membranes that cover the brain and spinal cord). The signs and symptoms of the condition vary based on the size and location of the cysts. Some affected people may have no suspicious symptoms while others experience progressive back and leg pain; tingling or numbness in the hands or feet; weakness of the legs; and involuntary muscle spasms (spasticity) that result in slow, stiff movements of the legs. When present, symptoms usually occur when the cysts compress the spinal cord or other nearby nerves. Spinal intradural arachnoid cysts are often present at birth and arecaused by developmental abnormalities in the spinal cord that occur during the pregnancy. They can also result from a previous infection or injury and develop later in life. Although there is disagreement in the medical community regarding when to treat spinal intradural arachnoid cysts, the need for treatment generally depends on the size and location of the cyst and whether or not it is causing symptoms. When indicated, the cysts are typically treated with surgery.


intracranial arachoid cyst

description: A cystic malformation that is characterized by extraparenchymal, nonneoplastic accumulations of fluid with density similar to that of cerebrospinal fluid.


An organic anionic group obtained by deprotonation of the phosphate and diphosphate OH groups of any adenosine-5'-diphospho-5'-ribonucleotide-2'-deoxyribonucleotide residue; major species at pH 7.3.


name: AFG32_HUMAN Mitochondrial inner membrane m-AAA protease component AFG3L2 (sprot)

description: An AFG3-like protein 2 that is encoded in the genome of human.


name: AFG3-like protein 2 deaminated 1 (human)

description: An AFG3-like protein 2 (human) that has been deaminated on the residue at the position equivalent to Asn-706 of the amino acid sequence represented by UniProtKB:Q9Y4W6. UniProtKB:Q9Y4W6, Asn-706, MOD:00684.


name: AFG3-like protein 2 acetylated 1 (human)

description: An AFG3-like protein 2 (human) that has been acetylated on the residue at the position equivalent to Lys-710 of the amino acid sequence represented by UniProtKB:Q9Y4W6. UniProtKB:Q9Y4W6, Lys-710, MOD:00723.


name: MB212_HUMAN Protein mab-21-like 2 (sprot)

description: A protein mab-21-like 2 that is encoded in the genome of human.


protein mab-21-like 2 isoform 1 (human)

A protein mab-21-like 2 isoform 1 that is encoded in the genome of human.


name: negative regulation of cytoplasmic translational elongation through polyproline stretches

category: biolink:BiologicalProcess biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.


name: regulation of cytoplasmic translational elongation through polyproline stretches

description: Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.


name: positive regulation of cytoplasmic translational elongation through polyproline stretches

description: Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.


SBMC_ECOLI DNA gyrase inhibitor (sprot)

A DNA gyrase inhibitor that is encoded in the genome of Escherichia coli K-12.


DNA gyrase inhibitor

A protein that is a translation product of the Escherichia coli K-12 gyrI gene or a 1:1 ortholog thereof.


name: Ductal Eccrine Carcinoma with Abundant Fibromyxoid Stroma

description: A variant of ductal eccrine carcinoma with abundant fibromyxoid stroma.


name: mitochondrial amidoxime-reducing component 1, initiator methionine removed form (human)

description: A mitochondrial amidoxime-reducing component 1 (human) that has had the initiator methionine removed. Example: UniProtKB:Q5VT66-1, 2-337.


name: LSP1B_DROME Larval serum protein 1 beta chain (sprot)

description: A protein that is a translation product of the Lsp1beta gene in fruit fly.


TOM1-like protein 2 isoform 1 (mouse)

A TOM1-like protein 2 isoform 1 that is encoded in the genome of mouse.


name: SUN domain-containing protein 3 isoform 1 (mouse)

description: A SUN domain-containing protein 3 isoform 1 that is encoded in the genome of mouse.


name: negative regulation of plasmacytoid dendritic cell cytokine production

description: Any process that stops, prevents, or reduces the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.


name: 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, transit peptide removed form (human)

description: A 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial (human) that has had the transit peptide removed. UniProtKB:P21953, 51-392.


name: 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, transit peptide removed form

description: A 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial that has had the transit peptide removed.


name: cAMP-regulated phosphoprotein 21 isoform h5 (human)

description: A cAMP-regulated phosphoprotein 21 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UBL0-5.


name: spermatogenesis-associated protein 22 isoform h2 (human)

description: A spermatogenesis-associated protein 22 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8NHS9-2.


name: SPT22_HUMAN Spermatogenesis-associated protein 22 (sprot)

description: A spermatogenesis-associated protein 22 that is encoded in the genome of human.


name: spermatogenesis-associated protein 22 isoform h1 (human)

description: A spermatogenesis-associated protein 22 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8NHS9-1.


name: spermatogenesis-associated protein 22 isoform h3 (human)

description: A spermatogenesis-associated protein 22 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8NHS9-3.


postsynaptic membrane assembly

description: The aggregation, arrangement and bonding together of a set of components to form a postsynaptic membrane, a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft).


postsynaptic membrane organization

description: A process which results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft).


phospholemman isoform 1 (rat)

A phospholemman isoform 1 that is encoded in the genome of rat.


name: protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 N-glycosylated 1 (rat)

description: A protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 (rat) that has been N-glycosylated at the residue equivalent to Asn-276 of the amino acid sequence represented by UniProtKB:Q5NDF0-1, in which the glycan composition is represented by GlyTouCan:G41247ZX. Example: UniProtKB:Q5NDF0-1, Asn-276, MOD:00160~GNO:G41247ZX.


A phenylpropanoid consisting of eugenol having a methyl substituent at the 6-position.


AURKB_DANRE Aurora kinase B (sprot)

An aurora kinase B that is encoded in the genome of zebrafish.


name: leucine-rich repeat-containing protein 55 isoform 1 (human)

description: A leucine-rich repeat-containing protein 55 isoform 1 that is encoded in the genome of human.


name: leucine-rich repeat-containing protein 55 isoform 1

description: A leucine-rich repeat-containing protein 55 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q6ZSA7-1 or a 1:1 ortholog thereof.


name: leucine-rich repeat-containing protein 55 isoform 1 (mouse)

description: A leucine-rich repeat-containing protein 55 isoform 1 that is encoded in the genome of mouse.


A 17alpha-hydroxy-C21-steroid that is cortisol in which the 4-5 double bond has undergone formal hydrogenation to give the corresponding 5beta- steroid.


name: BCAR3_RAT Breast cancer anti-estrogen resistance protein 3 homolog (sprot)

description: A breast cancer anti-estrogen resistance protein 3 that is encoded in the genome of rat.


name: FSV1_SCHPO Syntaxin-like protein fsv1 (sprot)

description: A protein that is a translation product of the fsv1 gene in Schizosaccharomyces pombe 972h-.


name: EI3JB_DANRE Eukaryotic translation initiation factor 3 subunit J-B (sprot)

description: A protein that is a translation product of the eif3jb gene in zebrafish.


Leu-enkephalin zwitterion

A peptide zwitterion obtained by transfer of a proton from the carboxy to the amino terminus of Leu-enkephalin. Major species at pH 7.3.


OS9_MOUSE Protein OS-9 (sprot)

A protein OS-9 that is encoded in the genome of mouse.


protein OS-9 isoform m1 (mouse)

A protein OS-9 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8K2C7-1.


protein OS-9 isoform m2 (mouse)

A protein OS-9 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8K2C7-2.


A uranium coordination entity consisting of uranium(V) bound to two pentamethylcyclopentadienyl groups, a 2,6-diisopropylanilino group (via a U=N bond) and a phenyltelluryl group.


sorting nexin-2 isoform 1 (human)

A sorting nexin-2 isoform 1 that is encoded in the genome of human.


sorting nexin-2 isoform 1

A sorting nexin-2 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O60749-1 or a 1:1 ortholog thereof.


sorting nexin-2 isoform 1 (mouse)

A sorting nexin-2 isoform 1 that is encoded in the genome of mouse.


perilipin-5 isoform m2 (mouse)

A perilipin-5 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8BVZ1-2.


PLIN5_MOUSE Perilipin-5 (sprot)

A perilipin-5 that is encoded in the genome of mouse.


perilipin-5 isoform m1 (mouse)

A perilipin-5 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8BVZ1-1.


name: metabotropic glutamate receptor 4 isoform m1 (mouse)

description: A metabotropic glutamate receptor 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q68EF4-1.


metabotropic glutamate receptor 4

A metabotropic glutamate receptor protein that is a translation product of the human GRM4 gene or a 1:1 ortholog thereof.


name: metabotropic glutamate receptor 4 isoform h4 (human)

description: A metabotropic glutamate receptor 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14833-4.


name: metabotropic glutamate receptor 4 isoform h1 (human)

description: A metabotropic glutamate receptor 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14833-1.


name: GRM4_RAT Metabotropic glutamate receptor 4 (sprot)

description: A metabotropic glutamate receptor 4 that is encoded in the genome of rat.


name: metabotropic glutamate receptor 4 isoform h2 (human)

description: A metabotropic glutamate receptor 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14833-2.


name: metabotropic glutamate receptor 4 isoform h3 (human)

description: A metabotropic glutamate receptor 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14833-3.


name: metabotropic glutamate receptor 4, signal peptide removed form (human)

description: A metabotropic glutamate receptor 4 (human) that has had the signal peptide removed. UniProtKB:Q14833, 33-912.


name: metabotropic glutamate receptor 4 isoform h5 (human)

description: A metabotropic glutamate receptor 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14833-5.


name: metabotropic glutamate receptor 4 isoform m2 (mouse)

description: A metabotropic glutamate receptor 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q68EF4-2.


name: GRM4_MOUSE Metabotropic glutamate receptor 4 (sprot)

description: A metabotropic glutamate receptor 4 that is encoded in the genome of mouse.


retinitis pigmentosa 50

description: Any retinitis pigmentosa in which the cause of the disease is a mutation in the BEST1 gene.


A mimotope of the pyruvate dehydrogenase E2 component (PDC-E2) comprising a 2,5-bis(trifluoromethyl)benzoyl group linked to the lipoated PDC-E2 core dodecapeptide (DKATIGFEVQEE) at N-6 of lysine.


name: EEF1A lysine methyltransferase 2 methylated 1 (human)

description: An EEF1A lysine methyltransferase 2 (human) that has been methylated on the residue at the position equivalent to Cys-257 of the amino acid sequence represented by UniProtKB:Q5JPI9. UniProtKB:Q5JPI9, Cys-257, MOD:00660.


name: GTP cyclohydrolase 1 feedback regulatory protein isoform 1 (mouse)

description: A GTP cyclohydrolase 1 feedback regulatory protein isoform 1 that is encoded in the genome of mouse.


distal trisomy 9q

description: Distal trisomy 9q is a rare chromosomal anomaly, resulting from the partial trisomy of the long arm of chromosome 9, with a variable phenotype mostly characterized by psychomotor and speech delay, intellectual disability, hypotonia, long narrow habitus, craniofacial dysmorphism (incl. micro/dolichocephaly, facial asymmetry, narrow palpebral fissures, deep-set eyes, strabismus, microphthalmia, abnormally shaped ears, microstomia, micro/retrognathia) and hand and feet anomalies (incl. arachnodactyly, camptodactyly, abnormal implantation of digits). Congenital flexion contractures and limited joint movements have also been observed.


proton channel OTOP1

A protein that is a translation product of the human OTOP1 gene or a 1:1 ortholog thereof.


proton channel OTOP1 isoform m3 (mouse)

A proton channel OTOP1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q80VM9-3.


OTOP1_RAT Proton channel OTOP1 (sprot)

A proton channel OTOP1 that is encoded in the genome of rat.


proton channel OTOP1 isoform m2 (mouse)

A proton channel OTOP1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q80VM9-2.


name: OTOP1_MOUSE Proton channel OTOP1 (sprot)

description: A proton channel OTOP1 that is encoded in the genome of mouse.


name: OTOP1_HUMAN Proton channel OTOP1 (sprot)

description: A proton channel OTOP1 that is encoded in the genome of human.


name: proton channel OTOP1 phosphorylated 1 (human)

description: A proton channel OTOP1 (human) that has been phosphorylated on the residue at the position equivalent to Ser-382 of the amino acid sequence represented by UniProtKB:Q7RTM1. UniProtKB:Q7RTM1, Ser-382, MOD:00046.


proton channel OTOP1 isoform m1 (mouse)

A proton channel OTOP1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q80VM9-1.


tapasin cysteinylated 2 (human)

A tapasin (human) that has been cysteinylated on the residue at the position equivalent to Cys-315 of the amino acid sequence represented by UniProtKB:O15533-1. Example: UniProtKB:O15533-1, Cys-315, MOD:00765.


L-cysteinate group

An organic anionic group that is the conjugate base of L-cysteino group, obtained by deprotonation of the carboxy group; major species at pH 7.3.


name: inositol-3-phosphate synthase 1 methylated 1 (human)

description: An inositol-3-phosphate synthase 1 (human) that has been methylated on the residue at the position equivalent to Cys-437 of the amino acid sequence represented by UniProtKB:Q9NPH2-1. Example: UniProtKB:Q9NPH2-1, Cys-437, MOD:00660.


name: SPG7_MOUSE Mitochondrial inner membrane m-AAA protease component paraplegin (sprot)

description: A paraplegin that is encoded in the genome of mouse.


name: collagen alpha-1(I) chain isoform 1 (human)

description: A collagen alpha-1(I) chain isoform 1 that is encoded in the genome of human.


name: coiled-coil domain-containing protein 150 isoform h1 (human)

description: A coiled-coil domain-containing protein 150 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8NCX0-1.


name: paraneoplastic antigen Ma1 isoform 1 (human)

description: A paraneoplastic antigen Ma1 isoform 1 that is encoded in the genome of human.


Childhood Ovarian Mixed Germ Cell Tumor

description: A mixed germ cell tumor that arises from the ovary and occurs in children.


ovarian mixed germ cell neoplasm

description: An ovarian malignant germ cell tumor characterized by the presence of at least two different germ cell components. At least one of the germ cell components is primitive. The most common combination of germ cell elements is dysgerminoma and yolk sac tumor.


name: adhesion G protein-coupled receptor L1 phosphorylated 1

description: An adhesion G protein-coupled receptor L1 that has been phosphorylated on the residue at the position equivalent to Ser-1369 of the amino acid sequence represented by UniProtKB:Q80TR1. Example: UniProtKB:Q80TR1, Ser-1369, MOD:00046.


adhesion G protein-coupled receptor L1

A calcium-independent alpha-latrotoxin receptor that is a translation product of the human ADGRL1 gene or a 1:1 ortholog thereof.


name: AGRL1_RAT Adhesion G protein-coupled receptor L1 (sprot)

description: An adhesion G protein-coupled receptor L1 that is encoded in the genome of rat.


name: adhesion G protein-coupled receptor L1 phosphorylated 1 (human)

description: An adhesion G protein-coupled receptor L1 (human) that has been phosphorylated on the residue at the position equivalent to Tyr-731 of the amino acid sequence represented by UniProtKB:O94910-1. Example: UniProtKB:O94910-1, Tyr-731, MOD:00048.


name: adhesion G protein-coupled receptor L1 isoform 2

description: An adhesion G protein-coupled receptor L1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O88917-2 or a 1:1 ortholog thereof.


name: adhesion G protein-coupled receptor L1 isoform 4 cleaved 2 (rat)

description: An adhesion G protein-coupled receptor L1 isoform 4 cleaved 2 in rat. UniProtKB:O88917-4, 838-1471.


name: AGRL1_MOUSE Adhesion G protein-coupled receptor L1 (sprot)

description: An adhesion G protein-coupled receptor L1 that is encoded in the genome of mouse.


name: adhesion G protein-coupled receptor L1 isoform m2 (mouse)

description: An adhesion G protein-coupled receptor L1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q80TR1-2.


name: adhesion G protein-coupled receptor L1, signal peptide removed form

description: An adhesion G protein-coupled receptor L1 that has had the signal peptide removed.


name: adhesion G protein-coupled receptor L1 isoform 4 cleaved 1

description: An adhesion G protein-coupled receptor L1 isoform 4, signal peptide removed form that is the N-terminal product of the cleavage upstream of a Thr residue within the GPS domain, corresponding to Thr-838 in the rat sequence UniProtKB:O88917-4. This form remains non-covalently bound to the C-terminal product. Example: UniProtKB:O88917-4, 25-837.


name: adhesion G protein-coupled receptor L1 isoform 1 (mouse)

description: An adhesion G protein-coupled receptor L1 isoform 2 that is encoded in the genome of mouse.


name: adhesion G protein-coupled receptor L1 phosphorylated 1 (mouse)

description: An adhesion G protein-coupled receptor L1 phosphorylated 1 in mouse. UniProtKB:Q80TR1, Ser-1369, MOD:00046.


name: adhesion G protein-coupled receptor L1 O-glycosylated 1 (human)

description: An adhesion G protein-coupled receptor L1 (human) that has been O-glycosylated at the residue equivalent to Thr-464 of the amino acid sequence represented by UniProtKB:O94910-1, in which the glycan composition is represented by GlyTouCan:G43417UB. Example: UniProtKB:O94910-1, Thr-464, MOD:00005~GNO:G43417UB.


name: adhesion G protein-coupled receptor L1 isoform 4

description: An adhesion G protein-coupled receptor L1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O88917-4 or a 1:1 ortholog thereof.


name: adhesion G protein-coupled receptor L1 isoform 3

description: An adhesion G protein-coupled receptor L1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O88917-3 or a 1:1 ortholog thereof.


name: adhesion G protein-coupled receptor L1 isoform 4 (rat)

description: An adhesion G protein-coupled receptor L1 isoform 4 that is encoded in the genome of rat.


name: adhesion G protein-coupled receptor L1 isoform h1 (human)

description: An adhesion G protein-coupled receptor L1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O94910-1.


name: adhesion G protein-coupled receptor L1 isoform 4 cleaved 2

description: An adhesion G protein-coupled receptor L1 isoform 4, signal peptide removed form that is the C-terminal product of the cleavage upstream of a Thr residue within the GPS domain, corresponding to Thr-838 in the rat sequence UniProtKB:O88917-4. Example: UniProtKB:O88917-4, 838-1471.


name: AGRL1_HUMAN Adhesion G protein-coupled receptor L1 (sprot)

description: An adhesion G protein-coupled receptor L1 that is encoded in the genome of human.


name: adhesion G protein-coupled receptor L1 isoform 4, signal peptide removed form

description: An adhesion G protein-coupled receptor L1 isoform 4 that has had the signal peptide removed. Example: UniProtKB:O88917-4, 25-1471.


name: adhesion G protein-coupled receptor L1 isoform 3 (rat)

description: An adhesion G protein-coupled receptor L1 isoform 3 that is encoded in the genome of rat.


name: adhesion G protein-coupled receptor L1 isoform 2 (rat)

description: An adhesion G protein-coupled receptor L1 isoform 2 that is encoded in the genome of rat.


name: adhesion G protein-coupled receptor L1 phosphorylated 2 (human)

description: An adhesion G protein-coupled receptor L1 (human) that has been phosphorylated on the residue at the position equivalent to Tyr-326 of the amino acid sequence represented by UniProtKB:O94910-1. Example: UniProtKB:O94910-1, Tyr-326, MOD:00048.


name: adhesion G protein-coupled receptor L1 isoform h2 (human)

description: An adhesion G protein-coupled receptor L1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O94910-2.


name: adhesion G protein-coupled receptor L1 isoform 1 (rat)

description: An adhesion G protein-coupled receptor L1 isoform 1 that is encoded in the genome of rat.


name: adhesion G protein-coupled receptor L1 isoform 1, signal peptide removed form

description: An adhesion G protein-coupled receptor L1 isoform 1 that has had the signal peptide removed.


name: adhesion G protein-coupled receptor L1 isoform 1

description: An adhesion G protein-coupled receptor L1 that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O88917-1 or a 1:1 ortholog thereof.


name: adhesion G protein-coupled receptor L1 cysteinylated 1 (human)

description: An adhesion G protein-coupled receptor L1 (human) that has been cysteinylated on the residue at the position equivalent to Cys-83 of the amino acid sequence represented by UniProtKB:O94910-1. Example: UniProtKB:O94910-1, Cys-83, MOD:00765.


name: adhesion G protein-coupled receptor L1 proteolytic cleavage product

description: An adhesion G protein-coupled receptor L1 that has been processed by proteolytic cleavage.


name: adhesion G protein-coupled receptor L1 isoform 4 cleaved 1 (rat)

description: An adhesion G protein-coupled receptor L1 isoform 4 cleaved 1 in rat. UniProtKB:O88917-4, 25-837.


name: translation initiation factor eIF2B subunit delta methylated 1 (human)

description: A translation initiation factor eIF2B subunit delta (human) that has been methylated on the residue at the position equivalent to Cys-444 of the amino acid sequence represented by UniProtKB:Q9UI10-1. Example: UniProtKB:Q9UI10-1, Cys-444, MOD:00660.


name: ESF11_ARATH EMBRYO SURROUNDING FACTOR 1.1 (sprot)

description: A protein that is a translation product of the ESF1.1 gene in Arabidopsis thaliana.


name: Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform h1 (human)

description: An Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9ULH1-2.


A octadecanoid that is (10E,15Z)-octadecadienoic acid carrying three hydroxy substituents at positions 9, 12 and 13.


hexokinase-1 isoform 1 (human)

A hexokinase-1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P19367-1.


GRXC9_ARATH Glutaredoxin-C9 (sprot)

A protein that is a translation product of the GRXC9 gene in Arabidopsis thaliana.


name: collagen alpha-2(VI) chain methylated 1 (human)

description: A collagen alpha-2(VI) chain (human) that has been methylated on the residue at the position equivalent to Cys-777 of the amino acid sequence represented by UniProtKB:P12110-1. Example: UniProtKB:P12110-1, Cys-777, MOD:00660.


name: hydroxymethylglutaryl-CoA synthase, cytoplasmic cysteinylated 1 (human)

description: A hydroxymethylglutaryl-CoA synthase, cytoplasmic (human) that has been cysteinylated on the residue at the position equivalent to Cys-237 of the amino acid sequence represented by UniProtKB:Q01581. UniProtKB:Q01581, Cys-237, MOD:00765.


TUSC_ECOLI Protein TusC (sprot)

A protein TusC that is encoded in the genome of Escherichia coli K-12.


An N-acyl-15-methylhexadecasphing-4-enine in which the acyl group has 23 carbons and 0 double bonds.


name: negative regulation of neutrophil mediated killing of bacterium

description: Any process that decreases the frequency, rate or extent of the directed killing of a bacterium by a neutrophil.


name: negative regulation of neutrophil mediated killing of symbiont cell

description: Any process that decreases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.


name: negative regulation of neutrophil mediated killing of fungus

description: Any process that decreases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.


name: negative regulation of neutrophil mediated killing of gram-negative bacterium

description: Any process that decreases the frequency, rate or extent of the directed killing of a gram-negative bacterium by a neutrophil.


name: negative regulation of neutrophil mediated killing of gram-positive bacterium

description: Any process that decreases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.


name: retinol dehydrogenase 5 sequence variant A294P (human)

description: A retinol dehydrogenase 5 (human) that has a Pro residue at the position equivalent to Ala-294 of the amino acid sequence represented by UniProtKB:Q92781. UniProtKB:Q92781, Ala-294, CHEBI:50342.


carba mix

A mixture of three allergens: diphenylguanidine, zinc dibutyldithiocarbamate and zinc diethyldithiocarbamate, chemicals used as fungicides and pesticides, and also in the manufacture of many rubber products.


name: GPC5D_HUMAN G-protein coupled receptor family C group 5 member D (sprot)

description: A G-protein coupled receptor family C group 5 member D that is encoded in the genome of human.


name: G-protein coupled receptor family C group 5 member D isoform h3 (human)

description: A G-protein coupled receptor family C group 5 member D (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9NZD1-3.


name: G-protein coupled receptor family C group 5 member D isoform h1 (human)

description: A G-protein coupled receptor family C group 5 member D (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9NZD1-1.


name: G-protein coupled receptor family C group 5 member D isoform 2 (human)

description: A G-protein coupled receptor family C group 5 member D isoform 2 that is encoded in the genome of human.


name: alpha-S1-casein, signal peptide removed form

description: An alpha-S1-casein that has had the signal peptide removed.


name: alpha-S1-casein, signal peptide removed form (cow)

description: An alpha-S1-casein, signal peptide removed form in cow. UniProtKB:P02662, 16-214.


category: biolink:MolecularActivity biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction chloride(in) + 2 hydrogencarbonate(out) + Na+(out) = chloride(out) + 2 hydrogencarbonate(in) + Na+(in).


description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphoenolpyruvate(out) + phosphate(in) = phosphoenolpyruvate(in) + phosphate(out).


description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(in) + HCO3-(out) = chloride(out) + HCO3-(in).


name: sulfate:chloride antiporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(in) + sulfate(out) = chloride(out) + sulfate(in).


name: oxalate:chloride antiporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + oxalate(in) = chloride(in) + oxalate(out).


name: chloride:proton antiporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(out) + proton(in) = chloride(in) + proton(out).


name: ATP:phosphate antiporter activity

description: Enables the transfer of ATP from one side of a membrane to the other according to the reaction: ATP(out) + phosphate(in) = ATP(in) + phosphate(out).


name: histone H4, initiator methionine removed acetylated 1 (human)

description: A histone H4 (human) that has had the initiator methionine removed and that has been acetylated at the position equivalent to Lys-17 of the amino acid sequence represented by UniProtKB:P62805. UniProtKB:P62805, 2-103, Lys-17, MOD:00064.


name: heat shock factor protein 1 isoform Long (mouse)

description: A heat shock factor protein 1 isoform Long that is encoded in the genome of mouse.


name: heat shock factor protein 1 isoform m1 (mouse)

description: A heat shock factor protein 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P38532-2.


name: heat shock factor protein 1 isoform Long phosphorylated 2 (mouse)

description: A heat shock factor protein 1 isoform Long phosphorylated 2 in mouse. UniProtKB:P38532-1, Ser-303/Ser-307, MOD:00046.


name: putative fucosyltransferase-like protein isoform Short (Arabidopsis thaliana)

description: A putative fucosyltransferase-like protein (Arabidopsis thaliana) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9FX97-2.


name: Metastatic malignant neoplasm to pituitary gland

description: A malignant neoplasm metastasizing to the pituitary gland from another anatomic site.  The vast majority are carcinomas usually arising from the breast, lung, and gastrointestinal tract.


name: Metastatic Malignant Neoplasm in the Sellar Region

description: A malignant neoplasm that has metastasized to the sellar region from another anatomic site.


name: transcriptional enhancer factor TEF-4 isoform h1 (human)

description: A transcriptional enhancer factor TEF-4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q15562-1.


name: partner and localizer of BRCA2 sequence variant E384* (human)

description: A partner and localizer of BRCA2 (human) that has has been truncated after the position equivalent to Leu-383 of the amino acid sequence represented by UniProtKB:Q86YC2. UniProtKB:Q86YC2, 1-383.


name: collagen alpha-1(I) chain, signal peptide removed 3-hydroxy-proline and 4-hydroxy-proline form (human)

description: A collagen alpha-1(I) chain (human) that has had the signal peptide removed and that includes at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P02452, 23-1464, MOD:00038|MOD:00039.


name: collagen alpha-1(I) chain, signal peptide removed 5-hydroxy-lysine, 3-hydroxy-proline and 4-hydroxy-proline form (human)

description: A collagen alpha-1(I) chain (human) that has had the signal peptide removed and that includes at least one 5-hydroxy-lysine, at least one 3-hydroxy-proline and at least one 4-hydroxy-proline. UniProtKB:P02452, 23-1464, MOD:00037|MOD:00038|MOD:00039.


name: PHD finger protein 13 methylated 1 (human)

description: A PHD finger protein 13 (human) that has been methylated on the residue at the position equivalent to Cys-235 of the amino acid sequence represented by UniProtKB:Q86YI8. UniProtKB:Q86YI8, Cys-235, MOD:00660.


name: band 4.1-like protein 2 methylated 3 (human)

description: A band 4.1-like protein 2 (human) that has been methylated on the residue at the position equivalent to Cys-488 of the amino acid sequence represented by UniProtKB:O43491-1. Example: UniProtKB:O43491-1, Cys-488, MOD:00660.


A highly branched amino nonasaccharide consisting of a beta-D-GlcNAc residue at the reducing end with a beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-[beta-D-Xyl-(1->2)]-beta-D-Man-(1->4)-beta-D-GlcNAc moiety attached via a beta-(1->4)-linkage and an L-Fuc residue attached via an alpha-(1->3)-linkage. Found on Cry j 1, the major allergen of Cryptomeria japonica pollen.


perilipin-3 isoform h1 (human)

A perilipin-3 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O60664-1.


name: PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630 (sprot)

description: A protein that is a translation product of the PCMP-H71 gene in Arabidopsis thaliana.


name: syntaxin-binding protein 4 isoform m3 (mouse)

description: A syntaxin-binding protein 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9WV89-3.


syntaxin-binding protein 4

A protein that is a translation product of the human STXBP4 gene or a 1:1 ortholog thereof.


name: syntaxin-binding protein 4 isoform h2 (human)

description: A syntaxin-binding protein 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q6ZWJ1-2.


name: STXB4_HUMAN Syntaxin-binding protein 4 (sprot)

description: A syntaxin-binding protein 4 that is encoded in the genome of human.


name: syntaxin-binding protein 4 isoform m5 (mouse)

description: A syntaxin-binding protein 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9WV89-5.


name: syntaxin-binding protein 4 isoform m2 (mouse)

description: A syntaxin-binding protein 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9WV89-2.


name: syntaxin-binding protein 4 isoform h1 (human)

description: A syntaxin-binding protein 4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q6ZWJ1-1.


name: syntaxin-binding protein 4 isoform m1 (mouse)

description: A syntaxin-binding protein 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9WV89-1.


name: syntaxin-binding protein 4 isoform m4 (mouse)

description: A syntaxin-binding protein 4 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9WV89-4.


name: STXB4_MOUSE Syntaxin-binding protein 4 (sprot)

description: A syntaxin-binding protein 4 that is encoded in the genome of mouse.


name: syntaxin-binding protein 4 methylated 1 (human)

description: A syntaxin-binding protein 4 (human) that has been methylated on the residue at the position equivalent to Cys-265 of the amino acid sequence represented by UniProtKB:Q6ZWJ1-1. Example: UniProtKB:Q6ZWJ1-1, Cys-265, MOD:00660.


ATPase WRNIP1 isoform h2 (human)

An ATPase WRNIP1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q96S55-2.


name: DNA damage-inducible transcript 4 protein cysteinylated 2 (human)

description: A DNA damage-inducible transcript 4 protein (human) that has been cysteinylated on the residue at the position equivalent to Cys-140 of the amino acid sequence represented by UniProtKB:Q9NX09. UniProtKB:Q9NX09, Cys-140, MOD:00765.


name: DNA damage-inducible transcript 4 protein cysteinylated 1 (human)

description: A DNA damage-inducible transcript 4 protein (human) that has been cysteinylated on the residue at the position equivalent to Cys-54 of the amino acid sequence represented by UniProtKB:Q9NX09. UniProtKB:Q9NX09, Cys-54, MOD:00765.


name: DNA damage-inducible transcript 4 protein methylated 1 (human)

description: A DNA damage-inducible transcript 4 protein (human) that has been methylated on the residue at the position equivalent to Cys-140 of the amino acid sequence represented by UniProtKB:Q9NX09. UniProtKB:Q9NX09, Cys-140, MOD:00660.


name: DNA damage-inducible transcript 4 protein phosphorylated 1 (human)

description: A DNA damage-inducible transcript 4 protein (human) that has been phosphorylated on the residue at the position equivalent to Ser-223 of the amino acid sequence represented by UniProtKB:Q9NX09. UniProtKB:Q9NX09, Ser-223, MOD:00046.


name: DNA damage-inducible transcript 4 protein phosphorylated 2 (human)

description: A DNA damage-inducible transcript 4 protein (human) that has been phosphorylated on the residue at the position equivalent to Thr-25 of the amino acid sequence represented by UniProtKB:Q9NX09. UniProtKB:Q9NX09, Thr-25, MOD:00047.


name: DNA damage-inducible transcript 4 protein methylated 2 (human)

description: A DNA damage-inducible transcript 4 protein (human) that has been methylated on the residue at the position equivalent to Cys-93 of the amino acid sequence represented by UniProtKB:Q9NX09. UniProtKB:Q9NX09, Cys-93, MOD:00660.


name: 8ODP_RAT Oxidized purine nucleoside triphosphate hydrolase (sprot)

description: An oxidized purine nucleoside triphosphate hydrolase that is encoded in the genome of rat.


name: oxidized purine nucleoside triphosphate hydrolase

description: A protein that is a translation product of the human NUDT1 gene or a 1:1 ortholog thereof.


name: 8ODP_MOUSE Oxidized purine nucleoside triphosphate hydrolase (sprot)

description: An oxidized purine nucleoside triphosphate hydrolase that is encoded in the genome of mouse.


name: 8ODP_HUMAN Oxidized purine nucleoside triphosphate hydrolase (sprot)

description: An oxidized purine nucleoside triphosphate hydrolase that is encoded in the genome of human.


name: oxidized purine nucleoside triphosphate hydrolase isoform hp18 (human)

description: An oxidized purine nucleoside triphosphate hydrolase (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P36639-4.


name: oxidized purine nucleoside triphosphate hydrolase isoform hp21 (human)

description: An oxidized purine nucleoside triphosphate hydrolase (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P36639-3.


name: 8ODP_DANRE Oxidized purine nucleoside triphosphate hydrolase (sprot)

description: An oxidized purine nucleoside triphosphate hydrolase that is encoded in the genome of zebrafish.


name: oxidized purine nucleoside triphosphate hydrolase isoform hp22 (human)

description: An oxidized purine nucleoside triphosphate hydrolase (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P36639-2.


name: oxidized purine nucleoside triphosphate hydrolase isoform hp26 (human)

description: An oxidized purine nucleoside triphosphate hydrolase (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P36639-1.


name: phosphatidylcholine transfer protein isoform h2 (human)

description: A phosphatidylcholine transfer protein (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UKL6-2.


phosphatidylcholine transfer protein

A protein that is a translation product of the human PCTP gene or a 1:1 ortholog thereof.


name: phosphatidylcholine transfer protein deaminated 1 (human)

description: A phosphatidylcholine transfer protein (human) that has been deaminated on the residue at the position equivalent to Gln-182 of the amino acid sequence represented by UniProtKB:Q9UKL6-1. Example: UniProtKB:Q9UKL6-1, Gln-182, MOD:00685.


name: phosphatidylcholine transfer protein isoform 1 (rat)

description: A phosphatidylcholine transfer protein isoform 1 that is encoded in the genome of rat.


name: phosphatidylcholine transfer protein isoform 1

description: A phosphatidylcholine transfer protein that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UKL6-1 or a 1:1 ortholog thereof.


name: phosphatidylcholine transfer protein isoform 1 (human)

description: A phosphatidylcholine transfer protein isoform 1 that is encoded in the genome of human.


protein localization to bud neck

description: A process in which a protein is transported to, or maintained at, a location within a cellular bud neck.


tRNA methylthiolation

description: The addition of a methylthioether group (-SCH3) to a nucleotide in a tRNA molecule.


name: E3 ubiquitin-protein ligase ZNRF3, signal peptide removed ubiquitinated form (human)

description: An E3 ubiquitin-protein ligase ZNRF3 (human) that has had the signal peptide removed and that includes at least one ubiquitinated lysine. UniProtKB:Q9ULT6, 56-936, MOD:01148.


name: zinc resistance-associated protein, signal peptide removed form

description: A zinc resistance-associated protein that has had the signal peptide removed.


zinc resistance-associated protein

A protein that is a translation product of the Escherichia coli K-12 zraP gene or a 1:1 ortholog thereof.


name: ZRAP_ECOLI Zinc resistance-associated protein (sprot)

description: A zinc resistance-associated protein that is encoded in the genome of Escherichia coli K-12.


name: dual specificity tyrosine-phosphorylation-regulated kinase 2 ubiquitinated form (human)

description: A dual specificity tyrosine-phosphorylation-regulated kinase 2 (human) that includes at least one ubiquitinated lysine. UniProtKB:Q92630, MOD:01148.


name: T-complex protein 1 subunit eta isoform 1 phosphorylated 1 (mouse)

description: A T-complex protein 1 subunit eta isoform 1 phosphorylated 1 in mouse. UniProtKB:P80313-1, Thr-57, MOD:00047|Ser-59, MOD:00046.


name: RAD4_ARATH DNA repair protein RAD4 (sprot)

description: A DNA repair protein complementing XP-C cells that is encoded in the genome of Arabidopsis thaliana.


name: Diglycosyi phenol phthiocerol dimycocerosate


name: limb region 1 protein isoform m2 (mouse)

description: A limb region 1 protein (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9JIT0-2.


name: hepatocyte growth factor-regulated tyrosine kinase substrate isoform r2 (rat)

description: A hepatocyte growth factor-regulated tyrosine kinase substrate (rat) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9JJ50-2.


name: NIP1_ARATH NEP1-interacting protein 1 (sprot)

description: A protein that is a translation product of the NIP1 gene in Arabidopsis thaliana.


testis-expressed protein 2

A protein that is a translation product of the human TEX2 gene or a 1:1 ortholog thereof.


name: testis-expressed protein 2 isoform h1 (human)

description: A testis-expressed protein 2 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IWB9-1.


name: testis-expressed protein 2 phosphorylated 1 (human)

description: A testis-expressed protein 2 (human) that has been phosphorylated on the residue at the position equivalent to Ser-802 of the amino acid sequence represented by UniProtKB:Q8IWB9-1. Example: UniProtKB:Q8IWB9-1, Ser-802, MOD:00046.


name: testis-expressed protein 2 isoform h2 (human)

description: A testis-expressed protein 2 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IWB9-2.


name: TEX2_HUMAN Testis-expressed protein 2 (sprot)

description: A testis-expressed protein 2 that is encoded in the genome of human.


name: TEX2_MOUSE Testis-expressed protein 2 (sprot)

description: A testis-expressed protein 2 that is encoded in the genome of mouse.


A protein that is a translation product of the human PAPPA gene or a 1:1 ortholog thereof.


pappalysin-1 deaminated 4 (human)

A pappalysin-1 (human) that has been deaminated on the residue at the position equivalent to Asn-547 of the amino acid sequence represented by UniProtKB:Q13219. UniProtKB:Q13219, Asn-547, MOD:00684.


pappalysin-1 isoform m1 (mouse)

A pappalysin-1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R4K8-1.


name: pappalysin-1 proteolytic cleavage product

description: A pappalysin-1 that has been processed by proteolytic cleavage.


pappalysin-1 phosphorylated 1 (human)

A pappalysin-1 (human) that has been phosphorylated on the residue at the position equivalent to Tyr-355 of the amino acid sequence represented by UniProtKB:Q13219. UniProtKB:Q13219, Tyr-355, MOD:00048.


pappalysin-1 isoform m2 (mouse)

A pappalysin-1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8R4K8-2.


pappalysin-1 deaminated 2 (human)

A pappalysin-1 (human) that has been deaminated on the residue at the position equivalent to Asn-1487 of the amino acid sequence represented by UniProtKB:Q13219. UniProtKB:Q13219, Asn-1487, MOD:00684.


pappalysin-1 deaminated 5 (human)

A pappalysin-1 (human) that has been deaminated on the residue at the position equivalent to Asn-1465 of the amino acid sequence represented by UniProtKB:Q13219. UniProtKB:Q13219, Asn-1465, MOD:00684.


PAPP1_HUMAN Pappalysin-1 (sprot)

A pappalysin-1 that is encoded in the genome of human.


pappalysin-1 deaminated 3 (human)

A pappalysin-1 (human) that has been deaminated on the residue at the position equivalent to Asn-390 of the amino acid sequence represented by UniProtKB:Q13219. UniProtKB:Q13219, Asn-390, MOD:00684.


pappalysin-1 deaminated 1 (human)

A pappalysin-1 (human) that has been deaminated on the residue at the position equivalent to Asn-1324 of the amino acid sequence represented by UniProtKB:Q13219. UniProtKB:Q13219, Asn-1324, MOD:00684.


PAPP1_MOUSE Pappalysin-1 (sprot)

A pappalysin-1 that is encoded in the genome of mouse.


name: emopamil-binding protein-like isoform 1 (mouse)

description: An emopamil-binding protein-like isoform 1 that is encoded in the genome of mouse.


aminoxyl

The parent compound of the aminoxyl group of radicals.


oxygen radical

An inorganic radical in which a free electron resides on one or more oxygen atoms of an oxygen species.


An inorganic radical cation resulting from the loss of one electron from helium-3.


cullin-7 deaminated 2 (human)

A cullin-7 (human) that has been deaminated on the residue at the position equivalent to Gln-244 of the amino acid sequence represented by UniProtKB:Q14999-1. Example: UniProtKB:Q14999-1, Gln-244, MOD:00685.


name: uncharacterized protein C6orf106 homolog isoform 1 (chicken)

description: A protein ILRUN isoform 1 that is encoded in the genome of chicken.


name: uncharacterized protein C1orf159 isoform h5 (human)

description: An uncharacterized protein C1orf159 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q96HA4-5.


name: TR129_RAT Taste receptor type 2 member 129 (sprot)

description: A taste receptor type 2 member 129 that is encoded in the genome of rat.


A 1,2-diacyl-sn-glycerol in which both the acyl groups are specified as arachidonoyl.


name: sodium/potassium-transporting ATPase subunit beta-2 isoform 1 (mouse)

description: A sodium/potassium-transporting ATPase subunit beta-2 isoform 1 that is encoded in the genome of mouse.


name: Stage IC Fallopian Tube Cancer AJCC v6 and v7

description: Stage IC includes: T1c, N0, M0.  T1c: Tumor limited to one or both tubes with extension onto or through the tubal serosa, or with malignant cells in ascites or peritoneal washings.  N0: No regional lymph node metastasis.  M0: No distant metastasis.  (AJCC 6th and 7th eds.)


name: AR6P6_MOUSE ADP-ribosylation factor-like protein 6-interacting protein 6 (sprot)

description: An ADP-ribosylation factor-like protein 6-interacting protein 6 that is encoded in the genome of mouse.


kelch-like protein 24 isoform 1 (mouse)

A kelch-like protein 24 isoform 1 that is encoded in the genome of mouse.


name: LDAH_DICDI Lipid droplet-associated hydrolase (sprot)

description: A lipid droplet-associated hydrolase that is encoded in the genome of Dictyostelium discoideum.


name: cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A isoform 1 (mouse)

description: A cGMP-inhibited 3',5'-cyclic phosphodiesterase 3A isoform 1 that is encoded in the genome of mouse.


The L-alpha-amino acid residue formed from O-(N-acetyl-beta-D-glucosaminyl)-L-threonine.


metal-dependent deubiquitinase activity

description: An metal-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.


name: leucine-rich repeat serine/threonine-protein kinase 1 isoform m2 (mouse)

description: A leucine-rich repeat serine/threonine-protein kinase 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q3UHC2-2.


name: leucine-rich repeat serine/threonine-protein kinase 1

description: A protein that is a translation product of the human LRRK1 gene or a 1:1 ortholog thereof.


name: leucine-rich repeat serine/threonine-protein kinase 1 isoform m1 (mouse)

description: A leucine-rich repeat serine/threonine-protein kinase 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q3UHC2-1.


name: leucine-rich repeat serine/threonine-protein kinase 1 isoform h2 (human)

description: A leucine-rich repeat serine/threonine-protein kinase 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q38SD2-2.


name: LRRK1_MOUSE Leucine-rich repeat serine/threonine-protein kinase 1 (sprot)

description: A leucine-rich repeat serine/threonine-protein kinase 1 that is encoded in the genome of mouse.


name: leucine-rich repeat serine/threonine-protein kinase 1 isoform h1 (human)

description: A leucine-rich repeat serine/threonine-protein kinase 1 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q38SD2-1.


name: LRRK1_HUMAN Leucine-rich repeat serine/threonine-protein kinase 1 (sprot)

description: A leucine-rich repeat serine/threonine-protein kinase 1 that is encoded in the genome of human.


name: leucine-rich repeat serine/threonine-protein kinase 1 isoform m3 (mouse)

description: A leucine-rich repeat serine/threonine-protein kinase 1 (mouse) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q3UHC2-3.


sennetsu fever

description: A disease caused by infection with Neorickettsia sennetsu.


Anaplasmataceae infectious disease

description: Infections with bacteria of the family anaplasmataceae.


human monocytic ehrlichiosis

description: A form of ehrlichiosis associated with Ehrlichia chaffeensis, an obligate intracellular pathogen affecting monocytes and macrophages.


anaplasmosis

description: A disease or disorder caused by infection with Anaplasma.


human granulocytic ehrlichiosis

description: A tick-borne, infectious disease caused by Anaplasma phagocytophilum, an obligate intracellular bacterium that is typically transmitted to humans by ticks of the Ixodes ricinus species complex.


Neorickettsia infectious disease

description: A disease caused by infection with Neorickettsia.


ehrlichiosis

description: An disease or disorder caused by infection with Ehrlichia.


name: TYW5_DANRE tRNA wybutosine-synthesizing protein 5 (sprot)

description: A tRNA wybutosine-synthesizing protein 5 that is encoded in the genome of zebrafish.


name: CWC22_DANRE Pre-mRNA-splicing factor CWC22 homolog (sprot)

description: A pre-mRNA-splicing factor CWC22 that is encoded in the genome of zebrafish.


PHD finger protein 6 isoform h4 (human)

A PHD finger protein 6 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q8IWS0-4.


name: MNN1_YEAST Alpha-1,3-mannosyltransferase MNN1 (sprot)

description: A protein that is a translation product of the MNN1 gene in yeast.


name: NAD-dependent protein deacetylase sirtuin-1 isoform m1 phosphorylated 1 (mouse)

description: An NAD-dependent protein deacetylase sirtuin-1 isoform m1 (mouse) that has been phosphorylated at Thr-522. UniProtKB:Q923E4-1, Thr-522, MOD:00047.


vesicle lumen

category: biolink:CellularComponent biolink:AnatomicalEntity biolink:PhysicalEssence biolink:OrganismalEntity biolink:SubjectOfInvestigation biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The volume enclosed by the membrane or protein that forms a vesicle.


acrosomal lumen

description: The volume enclosed within the acrosome membrane.


name: trans-Golgi network transport vesicle lumen

description: The volume enclosed within the membrane of a trans-Golgi network transport vesicle.


dense core granule lumen

description: The volume enclosed by the dense core granule membrane.


cytoplasmic vesicle lumen

description: The volume enclosed by a cytoplasmic vesicle.


phagolysosome vesicle lumen

description: The volume enclosed by the membrane of a phagolysosome.


neuronal dense core vesicle lumen

description: The volume enclosed by a neuronal dense core vesicle membrane.


chromaffin granule lumen

description: The volume enclosed by the membrane of a chromaffin granule.


A0A0H3GDY9_BRUSU Ribokinase (trembl)

A ribokinase that is encoded in the genome of Brucella suis 1330.


ribokinase

A protein that is a translation product of the human RBKS gene or a 1:1 ortholog thereof.


ribokinase isoform h1 (human)

A ribokinase (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9H477-1.


RBSK_ECOLI Ribokinase (sprot)

A ribokinase that is encoded in the genome of Escherichia coli K-12.


RBSK_DICDI Ribokinase (sprot)

A ribokinase that is encoded in the genome of Dictyostelium discoideum.


RBSK_YEAST Ribokinase (sprot)

A ribokinase that is encoded in the genome of yeast.


RBSK_SCHPO Ribokinase (sprot)

A ribokinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.


RBSK_MOUSE Ribokinase (sprot)

A ribokinase that is encoded in the genome of mouse.


Q8YDT6_BRUME Ribokinase (trembl)

A ribokinase that is encoded in the genome of Brucella melitensis bv. 1 str. 16M.


Q19133_CAEEL Ribokinase (trembl)

A ribokinase that is encoded in the genome of worm.


ribokinase isoform h2 (human)

A ribokinase (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9H477-2.


RBSK_HUMAN Ribokinase (sprot)

A ribokinase that is encoded in the genome of human.


A monovalent inorganic anion that consists of triphosphoric acid in which one of the five OH groups has been deprotonated.


name: succinate dehydrogenase assembly factor 3, mitochondrial isoform 1 (mouse)

description: A protein ACN9, mitochondrial isoform 1 that is encoded in the genome of mouse.


name: YFG5_SCHPO Uncharacterized mitochondrial carrier C19G12.05 (sprot)

description: A tricarboxylate transport protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.


name: TKTC2_ARATH Transketolase-2, chloroplastic (sprot)

description: A protein that is a translation product of the TKL-2 gene in Arabidopsis thaliana.


name: synaptic vesicle glycoprotein 2B isoform 1 (human)

description: A synaptic vesicle glycoprotein 2B isoform 1 that is encoded in the genome of human.


name: HS702_ARATH Heat shock 70 kDa protein 2 (sprot)

description: A protein that is a translation product of the MED37D gene in Arabidopsis thaliana.


name: BCSE_ECOLI Cyclic di-GMP binding protein BcsE (sprot)

description: A cyclic di-GMP binding protein BcsE that is encoded in the genome of Escherichia coli K-12.


pyoureter

description: An abscess that is located in the ureter.


name: histone H3.1, initiator methionine removed trimethylated 2 (human)

description: A histone H3.1 (human) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-5 of the amino acid sequence represented by UniProtKB:P68431. UniProtKB:P68431, 2-136, Lys-5, MOD:00083.


name: Refractory Fallopian Tube Clear Cell Adenocarcinoma

description: Fallopian tube clear cell adenocarcinoma that is resistant to treatment.


NU133_YEAST Nucleoporin NUP133 (sprot)

A protein that is a translation product of the NUP133 gene in yeast.


A D-glucosylsphingosine(1+) obtained by protonation of the amino group of any beta-D-glucosylsphingosine; major species at pH 7.3.


name: Rho-associated protein kinase 1 isoform 1 unmodified form (human)

description: A Rho-associated protein kinase 1 isoform 1 unmodified form in human.


name: Rho-associated protein kinase 1 deaminated 1 (human)

description: A Rho-associated protein kinase 1 (human) that has been deaminated on the residue at the position equivalent to Gln-787 of the amino acid sequence represented by UniProtKB:Q13464. UniProtKB:Q13464, Gln-787, MOD:00685.


name: Rho-associated protein kinase 1, initiator methionine removed form (human)

description: A Rho-associated protein kinase 1 (human) that has had the initiator methionine removed. UniProtKB:Q13464, 2-1354.


name: Rho-associated protein kinase 1 deaminated 2 (human)

description: A Rho-associated protein kinase 1 (human) that has been deaminated on the residue at the position equivalent to Asn-644 of the amino acid sequence represented by UniProtKB:Q13464. UniProtKB:Q13464, Asn-644, MOD:00684.


name: Rho-associated protein kinase 1 isoform 1 (human)

description: A Rho-associated protein kinase 1 isoform 1 that is encoded in the genome of human.


name: Rho-associated protein kinase 1 isoform 1 cleaved 1 (human)

description: A Rho-associated protein kinase 1 isoform 1 cleaved 1 in human. UniProtKB:Q13464-1, 1-1113.


name: Rho-associated protein kinase 1 phosphorylated 1 (human)

description: A Rho-associated protein kinase 1 (human) that has been phosphorylated on the residue at the position equivalent to Ser-1301 of the amino acid sequence represented by UniProtKB:Q13464. UniProtKB:Q13464, Ser-1301, MOD:00046.


name: DNA replication complex GINS protein SLD5 isoform 1 (mouse)

description: A DNA replication complex GINS protein SLD5 isoform 1 that is encoded in the genome of mouse.


delta-carotene biosynthetic process

description: The chemical reactions and pathways resulting in the formation of delta-carotene.


name: butyrophilin subfamily 3 member A2, signal peptide removed form (human)

description: A butyrophilin subfamily 3 member A2 (human) that has had the signal peptide removed. Example: UniProtKB:P78410-1, 30-334.


name: SPT25_MOUSE Spermatogenesis-associated protein 25 (sprot)

description: A spermatogenesis-associated protein 25 that is encoded in the genome of mouse.


spermatogenesis-associated protein 25

A protein that is a translation product of the human SPATA25 gene or a 1:1 ortholog thereof.


name: SPT25_HUMAN Spermatogenesis-associated protein 25 (sprot)

description: A spermatogenesis-associated protein 25 that is encoded in the genome of human.


poly(propylene imine) polymer

A homopolymer, composed of poly(propylene imine) macromolecules.


fatty alcohol 24:1

A fatty alcohol containing 24 carbons and 1 double bond. Formula is C24H48O.


name: CYFIP-related Rac1 interactor B isoform h2 (human)

description: A CYFIP-related Rac1 interactor B (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9NUQ9-2.


CYFIP-related Rac1 interactor B

A protein that is a translation product of the human CYRIB gene or a 1:1 ortholog thereof.


name: CYFIP-related Rac1 interactor B isoform 1

description: A CYFIP-related Rac1 interactor B that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9NUQ9-1 or a 1:1 ortholog thereof.


name: CYRIB_HUMAN CYFIP-related Rac1 interactor B (sprot)

description: A CYFIP-related Rac1 interactor B that is encoded in the genome of human.


name: CYFIP-related Rac1 interactor B, initiator methionine removed form (human)

description: A CYFIP-related Rac1 interactor B (human) that has had the initiator methionine removed. UniProtKB:Q9NUQ9, 2-324.


name: CYFIP-related Rac1 interactor B isoform 1 (human)

description: A CYFIP-related Rac1 interactor B isoform 1 that is encoded in the genome of human.


name: CYRIB_MOUSE CYFIP-related Rac1 interactor B (sprot)

description: A CYFIP-related Rac1 interactor B that is encoded in the genome of mouse.


name: CYFIP-related Rac1 interactor B isoform 1 (mouse)

description: A CYFIP-related Rac1 interactor B isoform 1 that is encoded in the genome of mouse.


name: CYFIP-related Rac1 interactor B deaminated 1 (human)

description: A CYFIP-related Rac1 interactor B (human) that has been deaminated on the residue at the position equivalent to Gln-131 of the amino acid sequence represented by UniProtKB:Q9NUQ9-1. Example: UniProtKB:Q9NUQ9-1, Gln-131, MOD:00685.


An oligonucleotide comprising ten deoxythymidylic acid residues linked 5'->3'.


An oligonucleotide comprised of eleven inosine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide containing four consecutive thymidyl residues, T1, T2, T3 and T4, arranged in the direction from the 5'-terminus to the 3'-terminus, with a (6-4) lesion at the central T2 and T3 residues.


An oligonucleotide comprised of 21 thymidine residues connected via 3'->5' phosphodiester linkages.


An RNA fragment comprised of four guanosine, eleven adenosine, two uridine and five cytidine residues connected by 3'->5' phosphodiester linkages in the sequence A-G-G-C-A-A-U-A-A-A-A-C-A-C-G-A-C-C-W-U-A-A-U-G.


A tRNA oligonucleotide comprised of a sequence of adenosine, inosine, cytidine, 1-methylinosine and uridine residues connected by 3'->5' phosphodiester linkages and with a phosphoric residue at the 3'-terminus.


A single-stranded DNA oligonucleotide consisting of five deoxyguanosine, six deoxycytidine, two deoxyadenosine and six thymidine residues connected by 3'->5' phosphodiester linkages in the sequence T-C-G-A-G-C-T-G-C-C-T-T-C-A-G-T-C-G-T. When part of a longer DNA sequence it can exist in a hairpin structure, with hydrogen bonding linking the six complementary base pairs C(2)-G(18), G(3)-C(17), A(4)-T(15), C(6)-G(15), T(6)-A(14) and G(8)-C(13).


A single-strand DNA oligonucleotide comprised of three deoxyadenosine, two deoxycytidine, four thymidine and eight deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence G-C-G-T-G-A-T-T-A-T-G-G-A-C, with a (6-4) lesion at the central two thymidine residues.


A single-strand DNA oligonucleotide consisting of a thymidine residue phospho-linked 3'->5' to a deoxycytidine residue (PDB entry: 2OK0).


A single-stranded DNA oligonucleotide composed of three deoxythymidylic acid residues connected by 3'->5' phosphodiester linkages and terminated by a 5'-phosphate.


A phosphorothioate oligonucleotide consisting of seven deoxyguanosine, seven deoxycytidine, three deoxyadenosine and four thymidine residues connected by 3'->5' phosphorothioate linkages in the sequence G-C-C-G-A-G-G-T-C-C-A-T-G-T-C-G-T-A-C-G-C.


An oligonucleotide comprised of five 2-deoxyuridine residues connected via 3'->5' phosphodiester linkages.


A phosphorothioate oligonucleotide consisting of twenty 2'-deoxyguanosine residues connected via 3'->5' phosphodiester linkages.


An oligonucleotide comprised of three adenosine components connected by (3'->5')-phosphodiester linkages.


tRNA oligonucleotide

An RNA oligonucleotide in which the RNA species is a tRNA molecule. An oligonucleotide that is a fragment of a larger tRNA molecule (either naturally occurring or synthetic). Phosphono groups may or may not be present at the 3'- and 5'- termini.


An oligonucleotide comprised of fifteen 2'-deoxyguanosine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide consisting of two thymidine molecules linked (3'->5') and also with a C6-C4 bond. It results from irradiation at 254 nm of normal dTpT (PDB entry: 1EHL).


An oligonucleotide comprised of eight thymidine residues connected via 3'->5' phosphodiester linkages.


5'-GAAACAC-3' RNA fragment

An RNA fragment comprised of one guanosine, four adenosine and two cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-A-A-A-C-A-C.


An oligonucleotide comprised of four thymidine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide comprised of six deoxyadenosine, three deoxycytidine, four thymidine and five deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence GTAACCGAAATCGGTTGA.


An oligonucleotide comprised of five adenosine residues connected by 2'->5' phosphodiester linkages and with a triphosphate group at the 5' terminus.


A single-stranded DNA oligonucleotide comprised of nine deoxyadenosine, eight thymidine, two deoxycytidine and two deoxyguanosine residues connected by 3'->5' phosphodiester linkages in the sequence A-A-A-A-A-T-C-C-T-T-T-T-T-G-G-A-T-T-A-A-A. Synthetic model oligodeoxyribonucleotide ligand.


A single-strand DNA oligonucleotide comprised of four deoxyadenosine, two deoxycytidine, four thymidine and eight deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence G-C-G-A-G-T-G-A-T-T-A-T-G-G-A-C-G-G, with a (6-4) lesion at the central two thymidine residues (PDB entry: 3VW3).


5'-CGUUCGCG-3' RNA fragment

An RNA fragment comprised of three cytidine, three guanosine and two uridine residues connected by 3'->5' phosphodiester linkages in the sequence C-G-U-U-C-G-C-G.


An oligonucleotide comprised of a 5'-diphosphonucleotide connected via a (3'->5') triphosphate-linkage to a chain of (3'->5') triphosphate-linked ribonucleotide residues. The number of nucleotide residues in the chain is between 1 and 8.


A single-stranded DNA oligonucleotide comprised of two deoxyadenosine, six deoxycytidine, four thymidine and five deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence d[CGAGCTGCCTTCAGTCG]. It can exist as a hairpin structure in several different conformations.


cyclic oligonucleotide

An oligonucleotide which has a cyclic structure with no terminus.


A tRNA oligonucleotide comprised of a sequence of adenosine, guanosine, inosine, 1-methylinosine and uridine residues connected by 3'->5' phosphodiester linkages and with a phosphoric residue at the 3'-terminus..


A tRNA oligonucleotide comprised of one inosine, one 1-methylated inosine, four cytidine, four guanosine and three uridine residues connected by 3'->5' phosphodiester linkages in the sequence C-G-C-U-U-I-G-C-m(1)I-U-G-C-G and with a phosphoric residue at the 3'-terminus. It can exist in a hairpin structure, with hydrogen bonding linking the three complementary base pairs at each terminus.


A single-stranded DNA oligonucleotide comprised of eight deoxyadenosine, four thymidine, three deoxycytidine and seven deoxyguanosine residues connected by 3'->5' phosphodiester linkages in the sequence ATGGACCAAAGAGTTTCAGGGA. It is a mimic of HuR mRNA nucleotides 671-692 and acts as an antagonist that deregulates human antigen R (HuR) expression and inhibits AKT(SER473) phosphorylation in prostate and other cancers.


A cyclic oligonucleotide consisting of TGCGAATTCGCT and TGCGAATTCGCT strands of DNA linked by hydrogen bonding between the base pairs and also covalently via two disulfanediyldiethane-1,2-diyl linkages between the N-3 atoms of the terminal thymidine residues.


A phosphorothioate oligonucleotide consisting of seven deoxyguanosine, seven deoxycytidine, four deoxyadenosine and three thymidine residues connected by 3'->5' phosphorothioate linkages in the sequence G-C-G-T-A-C-G-A-C-A-T-G-G-A-C-C-T-C-G-G-C.


A tRNA oligonucleotide comprised of one inosine, one 1-methylated inosine, three cytidine, three guanosine and three uridine residues connected by 3'->5' phosphodiester linkages in the sequence C-U-U-I-G-C-m(1)I-U-G-C-G and with a phosphono group at the 3'-terminus.


A single-strand DNA oligonucleotide comprised of four deoxyadenosine, eight deoxycytidine, four thymidine and two deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence C-C-C-G-T-C-C-A-T-A-A-T-C-A-C-T-C-G. (PDB entry: 3VW3).


single-stranded DNA oligonucleotide

An oligonucleotide that is a fragment of a larger single-stranded DNA molecule (either naturally occurring or synthetic). Phosphono groups may or may not be present at the 3'- and 5'- termini.


A single-strand DNA oligonucleotide comprised of four deoxyadenosine, eight deoxycytidine, four thymidine and two deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence C-C-G-T-C-C-A-T-A-A-T-C-A-C-T-C-G-C.


An oligonucleotide comprised of 21 2'-deoxycytidine residues connected via 3'->5' phosphodiester linkages.


A synthetic RNA fragment comprised of five adenosine, seven guanosine, five uridine and eight cytidine residues connected by 3'->5' phosphodiester linkages in the sequence A-A-G-U-C-U-C-C-A-C-U-C-G-A-G-U-G-U-C-C-G-A-G-C-G.


An oligonucleotide comprised of twenty guanosine residues connected via 3'->5' phosphodiester linkages.


A tRNA oligonucleotide comprised of a sequence of inosine, two adenosine, guanosine, cytidine, 1-methylinosine and uridine residues connected by 3'->5' phosphodiester linkages and with a phosphoric residue at the 3'-terminus.


A tRNA oligonucleotide comprised of a sequence of inosine, adenosine, guanosine, cytidine, 1-methylinosine and uridine residues connected by 3'->5' phosphodiester linkages and with a phosphoric residue at the 3'-terminus.


An oligonucleotide comprised of five thymidine residues connected via 3'->5' phosphodiester linkages.


An oligonucleotide comprised of twelve guanosine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide comprising 2'-deoxyadenosine and 2'-deoxyguanosine connected by a 3'->5 linkage and with a phosphoric group at the 5'-terminus.


RNA fragment

A nucleobase-containing molecular entity that is a fragment of a larger RNA molecule (either naturally occurring or synthetic). Phosphono groups may or may not be present at the 3'- and 5'- termini.


An RNA fragment comprised of five guanosine, eight adenosine, seven uridine and five cytidine residues connected by 3'->5' phosphodiester linkages in the sequence C-U-G-C-G-A-U-U-U-U-A-A-A-G-A-C-C-U-A-G-A-G-U-A-C.


A phosphorothioate oligonucleotide consisting of five deoxyguanosine, three deoxycytidine, four deoxyadenosine and nine thymidine residues connected by 3'->5' phosphorothioate linkages in the sequence T-G-T-G-G-G-T-T-A-A-G-A-C-T-T-T-T-T-A-C-C.


A phosphorothioate oligonucleotide consisting of six deoxyguanosine, four deoxycytidine, five deoxyadenosine and six thymidine residues connected by 3'->5' phosphorothioate linkages in the sequence G-C-A-G-T-C-T-A-T-T-A-C-T-G-T-G-C-G-A-G-A.


A synthetic RNA fragment comprised of four uridine, four adenosine and two guanosine residues connected by 3'->5' phosphodiester linkages in the sequence A-U-G-U-A-G-A-U-U-A.


An oligonucleotide comprised of three adenosine residues linked 2'->5' and with a triphosphate group at the 5' terminus.


An oligonucleotide comprised of six thymidine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide consisting of four deoxyguanosine, two deoxycytidine and eleven thymidine residues connected by 3'->5' phosphodiester linkages in the sequence C-G-T-G-C-T-G-T-T-T-T-T-T-T-T-T-G.


An oligonucleotide comprised of 25 inosine residues connected via 3'->5' phosphodiester linkages.


An oligonucleotide comprised of two thymidine residues connected via a 3'->5' phosphodiester linkage.


5'-GAGAGACCCAC-3' RNA fragment

An RNA fragment comprised of three guanosine, two adenosine and four cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-A-G-A-G-A-C-C-C-A-C.


A phosphorothioate oligonucleotide consisting of six deoxyguanosine, seven deoxycytidine, four deoxyadenosine and four thymidine residues connected by 3'->5' phosphorothioate linkages in the sequence C-G-G-C-T-C-C-A-T-G-T-A-C-A-G-C-A-T-G-C-G.


A single-stranded DNA oligonucleotide composed of five deoxythymidylic acid residues connected by 3'->5' phosphodiester linkages and terminated by 3'- and 5'-phosphate groups.


A single-stranded DNA oligonucleotide comprised of four deoxyadenosine and three thymidine residues connected by 3'->5' phosphodiester linkages in the sequence AATTTAA.


5'-GACCCCUG-3' RNA fragment

An RNA fragment comprised of two guanosine, one adenosine, one uridine and four cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-A-C-C-C-C-U-G.


A single-stranded DNA oligonucleotide comprised of five deoxyadenosine, five deoxycytidine, five thymidine and four deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence CTGCAGAATTCTGGTACCA.


A single-stranded DNA fragment comprised of one deoxyadenosine, four deoxycytidine, three thymidine and two deoxyguanidine residues connected by 3'->5' phosphodiester linkages in the sequence CTGCCTTCAG. It can exist as a hairpin structure, 5'-d [CTG(CCTT)CAG]-3', consisting of a four-nucleotide loop (CCTT) with a stem of three base-pairs, C-G, T-A and G-C.


phosphorothioate oligonucleotide

An oligonucleotide in which one of the non-bridging oxygens in each phosphodiester linkage has been replaced by sulfur. The main application of phosphorothioate linkages in an oligonucleotide is to protect the oligonucleotide from nuclease degradation.


5'-GUGACCC-3' RNA fragment

An RNA fragment comprised of two guanosine, one uridine, one adenosine and three cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-U-G-A-C-C-C.


A tRNA oligonucleotide comprised of a sequence of one inosine, one guanosine, one cytidine, one 1-methylinosine and one uridine residue connected by 3'->5' phosphodiester linkages and with a phosphoric residue at the 3'-terminus..


A single-stranded DNA oligonucleotide comprised of one thymidine, one deoxyguanidine and two deoxycytidine residues connected by 3'->5' phosphodiester linkages in the sequence CTGC.


An oligonucleotide comprising twenty deoxythymidylic acid residues linked 5'->3'.


A synthetic RNA fragment comprised of one uridine, one cytidine, four adenosine and four guanosine residues connected by 3'->5' phosphodiester linkages in the sequence U-G-G-G-A-A-G-A-C-A.


A single-stranded DNA oligonucleotide comprising two 2'-deoxyguanosine residues connected by a 3'->5 linkage and with a phosphoric group at the 5'-terminus.


5'-GAGACCC-3' RNA fragment

An RNA fragment comprised of two guanosine, two adenosine and three cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-A-G-A-C-C-C.


A single-stranded DNA oligonucleotide comprised of two deoxyadenosine, one thymidine and three deoxycytidine residues connected by 3'->5' phosphodiester linkages in the sequence TCAACC.


An oligonucleotide comprising fifteen deoxythymidylic acid residues linked 5'->3'.


A 24-residue single-stranded DNA oligonucleotide consisting of an alternating sequence of deoxycytidine and deoxyguanosine residues, all connected by 3'->5' phosphodiester linkages. It forms one strand of the double-stranded DNA oligonucleotide [d(C-G).d(C-G)]12 [synonym d(CG/GC)12].


An RNA fragment comprised of seven guanosine, five uridine, eight cytidine and four adenosine residues connected by 3'->5' phosphodiester linkages in the sequence G-U-U-U-G-G-C-G-A-C-G-U-C-C-C-A-C-A-U-G-A-G-C-C.


An RNA fragment comprised of six guanosine, seven adenosine, seven uridine and seven cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-A-U-A-U-A-C-A-C-G-C-A-U-A-U-C-A-G-C-G-U-U-C-G-C-G-U.


An oligonucleotide comprised of fifteen thymidine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide comprised of one deoxycytidine, one deoxyadenosine and two deoxyguanosine residues connected by 3'->5' phosphodiester linkages in the sequence GCAG.


A synthetic RNA fragment comprised of five adenosine, one guanosine, four uridine and three cytidine residues connected by 3'->5' phosphodiester linkages in the sequence U-G-G-G-A-A-G-A-C-A.


A single-stranded DNA oligonucleotide composed of five deoxythymidylic acid residues connected by 3'->5' phosphodiester linkages and terminated by a 3'-phosphate group.


An oligonucleotide comprised of a sequence of eight adenosine, five thymidine and a further eight adenosine residues connected via 3'->5' phosphodiester linkages.


A phosphorothioate oligonucleotide consisting of four deoxyguanosine, six deoxycytidine, four deoxyadenosine and four thymidine residues connected by 3'->5' phosphorothioate linkages in the sequence A-G-C-C-G-C-G-A-C-T-T-C-T-A-G-A-C-T.


An oligonucleotide comprised of ten 2'-deoxyguanosine residues connected via 3'->5' phosphodiester linkages.


A single-stranded DNA oligonucleotide comprised of three deoxycytidine and three thymidine residues connected by 3'->5' phosphodiester linkages in the sequence C-C-T-T-T-C.


An oligonucleotide comprised of ten thymidine residues connected via 3'->5' phosphodiester linkages.


An oligonucleotide comprising five deoxythymidylic acid residues linked 5'->3'.


An oligonucleotide comprised of twelve thymidine residues connected via 3'->5' phosphodiester linkages.


5'-GUAUGCAUAGGC-3' RNA fragment

An RNA fragment comprised of four guanosine, three adenosine, three uridine and two cytidine residues connected by 3'->5' phosphodiester linkages in the sequence G-U-A-U-G-C-A-U-A-G-G-C.


A synthetic RNA fragment comprised of eight adenosine, seven guanosine, three uridine and seven cytidine residues connected by 3'->5' phosphodiester linkages in the sequence A-A-G-U-C-U-C-C-A-C-U-C-G-A-G-U-G-U-C-C-G-A-G-C-G.


An RNA fragment comprised of six cytidine, seven guanosine, seven adenosine and five uridine residues connected by 3'->5' phosphodiester linkages in the sequence C-G-A-A-A-G-U-C-C-G-A-U-C-G-G-C-G-U-A-A-U-G-U-C-A.


An oligonucleotide composed of three deoxythymidylic acid residues connected by 3'->5' phosphodiester linkages.


A tRNA oligonucleotide comprised of a sequence of inosine, three adenosine, guanosine, cytidine, 1-methylinosine and uridine residues connected by 3'->5' phosphodiester linkages and with a phosphoric residue at the 3'-terminus.


A single-stranded DNA oligonucleotide comprised of four deoxyadenosine, two thymidine residues and one deoxycytidine residue connected by 3'->5' phosphodiester linkages in the sequence AATTCAA.


A single-stranded DNA oligonucleotide comprised of four deoxyadenosine, five deoxycytidine, six thymidine and three deoxyguanosine residues connected by 3'->5' phosphodiester linkages in the sequence T-C-A-A-C-C-G-A-T-T-T-C-G-G-T-T-A-C.


CCB13_ARATH Cyclin-B1-3 (sprot)

A protein that is a translation product of the CYCB1-3 gene in Arabidopsis thaliana.


carboxypeptidase A1 isoform 1 (rat)

A carboxypeptidase A1 isoform 1 that is encoded in the genome of rat.


name: YL154_YEAST Uncharacterized protein YLR154C-G (sprot)

description: A protein that is a translation product of the YLR154C-G gene in yeast.


CP7A1_RAT Cytochrome P450 7A1 (sprot)

A cytochrome P450 7A1 that is encoded in the genome of rat.


name: cholesterol 7-alpha-monooxygenase isoform 1 (rat)

description: A cytochrome P450 7A1 isoform 1 that is encoded in the genome of rat.


name: CYSP5_DICDI Cysteine proteinase 5 (sprot)

description: A cathepsin S that is encoded in the genome of Dictyostelium discoideum.


PCP12_ARATH Precursor of CEP12 (sprot)

A protein that is a translation product of the CEP12 gene in Arabidopsis thaliana.


IL17B_HUMAN Interleukin-17B (sprot)

An interleukin-17B that is encoded in the genome of human.


interleukin-17B isoform 1 (human)

An interleukin-17B isoform 1 that is encoded in the genome of human.


name: atrial natriuretic peptide receptor 1, signal peptide removed form (human)

description: An atrial natriuretic peptide receptor 1 (human) that has had the signal peptide removed. UniProtKB:P16066, 33-1061.


STC1_STAAU Staphylocoagulase (sprot)

A coagulase that is encoded in the genome of Staphylococcus aureus.


Q2G1D3_STAA8 Coagulase (trembl)

A coagulase that is encoded in the genome of Staphylococcus aureus subsp. aureus NCTC 8325.


name: staphylocoagulase (Staphylococcus aureus subsp. aureus JH1)

description: A coagulase that is encoded in the genome of Staphylococcus aureus subsp. aureus JH1.


name: brain-derived neurotrophic factor isoform h1 (human)

description: A brain-derived neurotrophic factor (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P23560-1.


name: RLA2_DROME Large ribosomal subunit protein P2 (sprot)

description: A large ribosomal subunit protein P2 that is encoded in the genome of fruit fly.


name: DSN1_YEAST Kinetochore-associated protein DSN1 (sprot)

description: A protein that is a translation product of the DSN1 gene in yeast.


name: next to BRCA1 gene 1 protein isoform h1 (human)

description: A next to BRCA1 gene 1 protein (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14596-1.


next to BRCA1 gene 1 protein

A protein that is a translation product of the human NBR1 gene or a 1:1 ortholog thereof.


name: next to BRCA1 gene 1 protein deaminated 2 (human)

description: A next to BRCA1 gene 1 protein (human) that has been deaminated on the residue at the position equivalent to Asn-935 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Asn-935, MOD:00684.


name: next to BRCA1 gene 1 protein phosphorylated 1 (human)

description: A next to BRCA1 gene 1 protein (human) that has been phosphorylated on the residue at the position equivalent to Ser-116 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Ser-116, MOD:00046.


name: next to BRCA1 gene 1 protein deaminated 1 (human)

description: A next to BRCA1 gene 1 protein (human) that has been deaminated on the residue at the position equivalent to Gln-916 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Gln-916, MOD:00685.


name: next to BRCA1 gene 1 protein deaminated 4 (human)

description: A next to BRCA1 gene 1 protein (human) that has been deaminated on the residue at the position equivalent to Asn-945 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Asn-945, MOD:00684.


name: next to BRCA1 gene 1 protein deaminated 3 (human)

description: A next to BRCA1 gene 1 protein (human) that has been deaminated on the residue at the position equivalent to Gln-933 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Gln-933, MOD:00685.


name: next to BRCA1 gene 1 protein isoform h2 (human)

description: A next to BRCA1 gene 1 protein (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q14596-2.


name: next to BRCA1 gene 1 protein cysteinylated 2 (human)

description: A next to BRCA1 gene 1 protein (human) that has been cysteinylated on the residue at the position equivalent to Cys-739 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Cys-739, MOD:00765.


name: next to BRCA1 gene 1 protein methylated 1 (human)

description: A next to BRCA1 gene 1 protein (human) that has been methylated on the residue at the position equivalent to Cys-533 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Cys-533, MOD:00660.


name: next to BRCA1 gene 1 protein cysteinylated 1 (human)

description: A next to BRCA1 gene 1 protein (human) that has been cysteinylated on the residue at the position equivalent to Cys-433 of the amino acid sequence represented by UniProtKB:Q14596-1. Example: UniProtKB:Q14596-1, Cys-433, MOD:00765.


GPV_RAT Platelet glycoprotein V (sprot)

A platelet glycoprotein V that is encoded in the genome of rat.


name: cellular response to mineralocorticoid stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mineralocorticoid stimulus. Mineralocorticoids are hormonal C21 corticosteroids synthesized from cholesterol and characterized by their similarity to aldosterone. Mineralocorticoids act primarily on water and electrolyte balance.


name: cellular response to corticosterone stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosterone stimulus. Corticosterone is a 21 carbon steroid hormone of the corticosteroid type, produced in the cortex of the adrenal glands. In many species, corticosterone is the principal glucocorticoid, involved in regulation of fuel metabolism, immune reactions, and stress responses.


name: cellular response to 11-deoxycorticosterone

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.


cellular response to aldosterone

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldosterone stimulus.


name: a disintegrin and metalloproteinase with thrombospondin motifs 13 isoform h1 (human)

description: An a disintegrin and metalloproteinase with thrombospondin motifs 13 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:Q76LX8-1.


Joubert syndrome 20

description: Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM231 gene.


protein SSX4 isoform h2 (human)

A protein SSX4 (human) that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:O60224-2.


name: LPP2_ARATH Lipid phosphate phosphatase 2 (sprot)

description: A protein that is a translation product of the LPP2 gene in Arabidopsis thaliana.


asperentin-8-methyl ether

A member of the class of  isocoumarins that is asperentin in which the hydroxy group at position 8 has been replaced by a methoxy group. It is a fungal metabolite isolated from Chaetomium globosum.


name: endoplasmic reticulum-Golgi intermediate compartment (ERGIC) derived vesicle fusion with endoplasmic reticulum membrane

description: The joining of the lipid bilayer membrane around an ERGIC-derived vesicle to the lipid bilayer membrane of the ER. Such vesicles include COPI-coated transport vesicles involved in retrograde transport.


melanotransferrin isoform 1

A melanotransferrin that is a translation product of some mRNA whose exon structure and start site selection renders it capable of giving rise to a protein with the amino acid sequence represented by UniProtKB:P08582-1 or a 1:1 ortholog thereof.


melanotransferrin isoform 1 (human)

A melanotransferrin isoform 1 that is encoded in the genome of human.


melanotransferrin isoform 1 (mouse)

A melanotransferrin isoform 1 that is encoded in the genome of mouse.


name: TVB9_HUMAN T cell receptor beta variable 9 (sprot)

description: A protein that is a translation product of the TRBV9 gene in human.


name: TVA41_HUMAN T cell receptor alpha variable 41 (sprot)

description: A protein that is a translation product of the TRAV41 gene in human.


(+)-phytocassane D

A phytocassane that is (+)-phytocassane A in which the hydroxy group at position 2 has been oxidised to the corresponding ketone, while the keto group at position 3 has been reduced to give the corresponding 3alpha hydroxy group.


name: MCM2_ARATH DNA replication licensing factor MCM2 (sprot)

description: A DNA replication licensing factor MCM2 that is encoded in the genome of Arabidopsis thaliana.


DNA replication licensing factor MCM2

A protein that is a translation product of the human MCM2 gene or a 1:1 ortholog thereof.


name: DNA replication licensing factor MCM2 isoform 1 (mouse)

description: A DNA replication licensing factor MCM2 isoform 1 that is encoded in the genome of mouse.


name: DNA replication licensing factor MCM2, initiator methionine removed form

description: A DNA replication licensing factor MCM2 that has had the initiator methionine removed.