name: oxidoreductase activity, acting on CH or CH2 groups

description: Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.


TORC2 signaling

category: biolink:Pathway biolink:OntologyClass biolink:BiologicalProcess biolink:Occurrent biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: A series of intracellular molecular signals mediated by TORC2; TOR (rapamycin-insensitive companion of TOR) in complex with at least Rictor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.


name: transmembrane receptor protein kinase activity

category: biolink:MolecularActivity biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.


name: response to G2 transition size control checkpoint signaling

category: biolink:BiologicalProcess biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: A process that occurs in response to signals generated as a result of G2/M transition size control checkpoint signaling.


positive regulation of glucose import

description: Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle.


somatic cell DNA recombination

description: Recombination occurring within or between DNA molecules in somatic cells.


peptidyl-selenocysteine modification

description: The modification of peptidyl-selenocysteine.


glucosylglycerol metabolic process

description: The chemical reactions and pathways involving glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.


positive regulation of locomotion

description: Any process that activates or increases the frequency, rate or extent of locomotion of a cell or organism.


endothelin receptor activity

description: Combining with endothelin and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.


name: atrial cardiac muscle cell to AV node cell signaling

description: Any process that mediates the transfer of information from an atrial cardiomyocyte to an AV node cell.


neutrophil migration

description: The movement of a neutrophil within or between different tissues and organs of the body.


name: oxazole or thiazole biosynthetic process

description: The chemical reactions and pathways resulting in the formation of oxazole or thiazole, five-membered heterocyclic ring structures containing an oxygen and a sulfur, respectively, in the 1-position and a nitrogen in the 3-position.


insemination

description: The introduction of semen or sperm into the genital tract of a female.


name: immune response-inhibiting cell surface receptor signaling pathway

description: The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell capable of inhibiting an immune response.


indole phytoalexin metabolic process

description: The chemical reactions and pathways involving indole phytoalexins, any indole compound produced by plants as part of their defense response.


name: regulation of lignin biosynthetic process

description: Any process that modulates the frequency, rate or extent of lignin biosynthetic process.


hopanoid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of hopanoids, pentacyclic sterol-like compounds based on the hopane nucleus.


undecaprenyl-diphosphatase activity

description: Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.


name: regulation of meiotic joint molecule formation

description: Any process that modulates the frequency, rate or extent of meiotic joint molecule formation. Meiotic joint molecule formation is the conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination.


name: negative regulation of apoptotic signaling pathway

description: Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic signaling pathway.


description: The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on fibronectin in the extracellular matrix.


Z-phenylacetaldoxime metabolic process

description: The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants.


strigolactone metabolic process

description: The chemical reactions and pathways involving strigolactone.


GTP biosynthetic process

description: The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.


cellular response to cholecystokinin

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholecystokinin stimulus.


interleukin-20 receptor activity

description: Combining with interleukin-20 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


phosphorus utilization

description: A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary phosphorus source and then activates genes to scavenge the last traces of the primary phosphorus source and to transport and metabolize alternative phosphorus sources. The utilization process begins when the cell or organism detects phosphorus levels, includes the phosphorus-containing substances, and ends when phosphorus is incorporated into the cell or organism's metabolism.


purine nucleobase catabolic process

description: The chemical reactions and pathways resulting in the breakdown of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.


teichoic acid D-alanylation

description: The formation of a D-alanyl ester of teichoic acid. Alanylation of teichoic acids modulates the properties of the bacterial cell wall and modulates the inflammatory properties of the teichoic acid.


name: smoothened signaling pathway involved in lung development

description: The series of molecular signals generated as a consequence of activation of the transmembrane Smoothened-type protein. This process contributes to lung development.


name: regulation of nitrogen cycle metabolic process

description: Any process that modulates the frequency, rate or extent of nitrogen cycle metabolic process.


name: protein-arginine omega-N symmetric methyltransferase activity

description: Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.


name: regulation of compound eye retinal cell apoptotic process

description: Any process that modulates the frequency, rate or extent of compound eye retinal cell apoptotic process.


cellular response to leukotriene B4

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.


name: negative regulation of flavonoid biosynthetic process

description: Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.


acylglycerol catabolic process

description: The chemical reactions and pathways resulting in the breakdown of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.


peptidyl-methionine oxidation

description: The oxidation of peptidyl-L-methionine to peptidyl-L-methionine sulfone.


name: pentacyclic triterpenoid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.


name: negative regulation of calcium-mediated signaling

description: Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-mediated signaling.


name: apolipoprotein A-I-mediated signaling pathway

description: The series of molecular signals initiated by apolipoprotein A-I binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


name: positive regulation of lipopolysaccharide-mediated signaling pathway

description: Any process that activates or increases the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.


description: Catalysis of the reaction: 1L-1-O-(indol-3-yl)acetyl-myo-inositol + UDP-D-galactose = 5-O-(indol-3-ylacetyl)-myo-inositol D-galactoside + H+ + UDP.


isoleucyl-tRNA aminoacylation

description: The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. The isoleucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a isoleucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.


description: The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule.


maturation of 5.8S rRNA

description: Any process involved in the maturation of a precursor 5.8S ribosomal RNA (rRNA) molecule into a mature 5.8S rRNA molecule.


name: regulation of DNA replication termination

description: Any process that modulates the frequency, rate or extent of DNA replication termination.


name: TRAMP-dependent tRNA surveillance pathway

description: A nuclear tRNA surveillance pathway, dependent on the TRAMP exosome adaptor and the nuclear exosome.


multivesicular body organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a multivesicular body. A multivesicular body is a type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.


name: endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

description: Endonucleolytic cleavage between the 5'-External Transcribed Spacer (5'-ETS) and the 5' end of the SSU-rRNA of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript, to produce the mature end of the SSU-rRNA.


name: negative regulation of SREBP signaling pathway in response to increased oxygen levels

description: Any process that stops, prevents or reduces the frequency, rate or extent of the SREBP signaling pathway in response to an increase in oxygen levels.


name: regulation of keratinocyte apoptotic process

description: Any process that modulates the frequency, rate or extent of keratinocyte apoptotic process.


name: negative regulation of ERBB4 signaling pathway

description: Any process that stops, prevents or reduces the frequency, rate or extent of ERBB4 signaling pathway.


glucosinolate metabolic process

description: The chemical reactions and pathways involving glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. They are metabolized to a variety of toxic products which are most likely the cause of hepatocytic necrosis in animals and humans.


name: positive regulation of chromosome attachment to the nuclear envelope

description: Any process that activates or increases the frequency, rate or extent of the chromosome attachment to the nuclear envelope.


name: histone H3K36 methyltransferase activity

description: Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 36) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 36). This reaction is the addition of a methyl group to the lysine residue at position 36 of the histone H3 protein.


name: lectin-induced modified bacterial internalization

description: The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by secretion of lectins which bind to the bacterial surface. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.


tetrahydrofolate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.


name: planar cell polarity pathway involved in axon guidance

description: Any Wnt signaling pathway, planar cell polarity pathway that is involved in axon guidance.


heme B catabolic process

description: The chemical reactions and pathways resulting in the breakdown of heme b, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.


name: cellular modified histidine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.


GDP-L-fucose metabolic process

description: The chemical reactions and pathways involving GDP-L-fucose, a substance composed of L-fucose in glycosidic linkage with guanosine diphosphate.


ERBB signaling pathway

description: The series of molecular signals initiated by binding of a ligand to a member of the ERBB family of receptor tyrosine kinases on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


name: positive regulation of lipid catabolic process

description: Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids.


intrachromosomal DNA recombination

description: The process of DNA recombination occurring within a single chromosome.


GPI anchor biosynthetic process

description: The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage.


cyanate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid.


spermine acetylation

description: The modification of spermine by addition of acetyl groups.


methanesulfonic acid metabolic process

description: The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.


type III interferon receptor activity

description: Combining with a type III interferon and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Interferon lambda is the only member of the type III interferon found so far.


name: follicle-stimulating hormone signaling pathway

description: A G protein-coupled receptor signaling pathway initiated by follicle-stimulating hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.


description: Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = a 5-methylcytidine in tRNA + S-adenosyl-L-homocysteine + H+. This modification can occur on seversal residues, including cytidine(34), cytidine(40), cytidine(48), and cytidine(49).


description: Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.


name: biotin transmembrane transporter activity

description: Enables the transfer of biotin from one side of a membrane to the other. Biotin is cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.


tRNA 4-thiouridine biosynthesis

description: The processes whereby a uridine residue in a tRNA is converted to 4-thiouridine. Typically 4-thiouridine is found at position 8, in many transfer RNAs.


cellular response to diethyl maleate

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diethyl maleate stimulus.


name: chemical synaptic transmission, postsynaptic

description: The part of synaptic transmission occurring in the post-synapse: a signal transduction pathway consisting of neurotransmitter receptor activation and its effects on postsynaptic membrane potential and the ionic composition of the postsynaptic cytosol.


name: erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of erythrose 4-phosphate/phosphoenolpyruvate family amino acid.


histone glutaryltransferase activity

description: Catalysis of the reaction: glutaryl-CoA + histone = CoA + H+ + N6-glutaryl-histone.


cordyol C metabolic process

description: The chemical reactions and pathways involving cordyol C.


name: poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of poly(glucopyranosyl N-acetylgalactosamine 1-phosphate) teichoic acid.


name: site-specific DNA-methyltransferase (cytosine-N4-specific) activity

description: Catalysis of the reaction: S-adenosyl-L-methionine + DNA cytosine = S-adenosyl-L-homocysteine + DNA N4-methylcytosine.


L-amino acid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of L-amino acids, the L-enantiomers of amino acids.


response to calcium ion

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.


name: positive regulation of SMAD protein signal transduction

description: Any process that increases the rate, frequency or extent of SMAD protein signal transduction.


protein phosphorylation

description: The process of introducing a phosphate group on to a protein.


peptidyl-lysine deglycation

description: The removal of a sugar or dicarbonyl from a lysine residue of a glycated protein.


regulation of Notch signaling pathway

description: Any process that modulates the frequency, rate or extent of the Notch signaling pathway.


phenylacetate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of phenylacetate.


name: circadian regulation of calcium ion oscillation

description: Any process that modulates the concentration of cytosolic free calcium ion [Ca2+]cyt with a regularity of approximately 24 hours.


name: negative regulation of mitotic DNA damage checkpoint

description: Any process that stops, prevents or reduces the frequency, rate or extent of mitotic DNA damage checkpoint.


thiamine diphosphate metabolic process

description: The chemical reactions and pathways involving thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.


name: intracellular distribution of mitochondria

description: Any process that establishes the spatial arrangement of mitochondria within the cell.


chemosynthesis

description: The cellular metabolic process in which organic chemical compounds are synthesized from carbon-containing molecules and nutrients using energy obtained from the oxidation of inorganic compounds or methane.


name: regulation of Rap protein signal transduction

description: Any process that modulates the frequency, rate or extent of Rap protein signal transduction.


glycoside metabolic process

description: The chemical reactions and pathways involving glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.


c-di-GMP signaling

description: Any process that mediates the transfer of information from one cell to another using c-di-GMP as the signal.


name: nucleoside triphosphate metabolic process

description: The chemical reactions and pathways involving a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.


name: negative adaptation of signaling pathway

description: The negative regulation of a signal transduction pathway in response to a stimulus upon prolonged exposure to that stimulus.


indolebutyric acid metabolic process

description: The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants.


name: formation of haustorium for nutrient acquisition

description: The assembly of a haustorium, a projection from a symbiotic cell or tissue that penetrates the host's tissues for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.


purine nucleoside interconversion

description: The chemical reactions and pathways by which a purine nucleoside is synthesized from another purine nucleoside.


name: trans-synaptic signaling by trans-synaptic complex

description: Cell-cell signaling between presynapse and postsynapse mediated by a trans-synaptic protein complex.


6-hydroxycineole catabolic process

description: The chemical reactions and pathways resulting in the breakdown of 6-hydroxycineole (6-hydroxy-1,8-epoxy-p-menthane), a hydrocarbon with the formula C10H18O2.


sorbose metabolic process

description: The chemical reactions and pathways involving sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.


cilium disassembly

description: A cellular process that results in the breakdown of a cilium.


C-X3-C chemokine receptor activity

description: Combining with a C-X3-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X3-C chemokine has three amino acids between the first two cysteines of the characteristic four-cysteine motif.


t-SNARE clustering

description: The clustering process in which t-SNARES are localized to distinct domains in the cell membrane. t-SNAREs are cell surface proteins which are part of secretory microdomain assemblies.


name: negative regulation of cell cycle G2/M phase transition

description: Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.


oxytocin production

description: The appearance of oxytocin, a cyclic nonapeptide hormone with amino acid sequence CYIQNCPLG, due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Oxytocin is the principal uterine-contracting and milk-ejecting hormone of the posterior pituitary, and together with the neuropeptide vasopressin, is believed to influence social cognition and behavior. It also acts as a neurotransmitter in the brain.


detection of external stimulus

description: The series of events in which an external stimulus is received by a cell and converted into a molecular signal.


name: regulation of activated CD8-positive, alpha-beta T cell apoptotic process

description: Any process that modulates the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.


name: high density lipoprotein particle mediated signaling

description: The series of molecular signals mediated by the detection of high density lipoprotein particle.


cell junction organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell junction. A cell junction is a specialized region of connection between two cells or between a cell and the extracellular matrix.


name: very long-chain fatty acid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.


perception of static position

description: The perception of the orientation of different parts of the body with respect to one another.


fructose uniporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in).


vibriobactin metabolic process

description: The chemical reactions and pathways involving vibriobactin, the major siderophore produced by Vibrio cholerae.


name: regulation of (Z)-nonadeca-1,14-diene metabolic process

description: Any process that modulates the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.


cellular response to auxin stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.


name: arachidonic acid 11,12-epoxygenase activity

description: Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-11,12-epoxyeicosatrienoic acid.


xylan catabolic process

description: The chemical reactions and pathways resulting in the breakdown of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.


primary follicle stage

description: The stage in oogenesis when a single layer of cuboidal follicle cells surrounds the oocyte. The oocyte nucleus is large.


name: release of cytochrome c from mitochondria

description: The process that results in the movement of cytochrome c from the mitochondrial intermembrane space into the cytosol, which is part of the apoptotic signaling pathway and leads to caspase activation.


description: Catalysis of the reaction: S-adenosyl-L-methionine + m7G(5')pppR-RNA = S-adenosyl-L-homocysteine + m7G(5')pppRm-RNA. R may be guanosine or adenosine.


substance K receptor activity

description: Combining with substance K, the peptide His-Lys-Thr-Asp-Ser-Phe-Val-Gly-Leu-Met, to initiate a change in cell activity.


putrescine metabolic process

description: The chemical reactions and pathways involving putrescine, 1,4-diaminobutane; putrescine can be formed by decarboxylation of ornithine and is the metabolic precursor of spermidine and spermine.


name: protein insertion into mitochondrial inner membrane from matrix

description: The process in which a protein is incorporated into the mitochondrial inner membrane from the matrix side. This includes membrane insertion of newly synthesized mitochondrially-encoded proteins, and insertion of nuclear-encoded proteins after their import into the mitochondrial matrix.


UAG codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes a UAG codon.


name: positive regulation by host of viral transcription

description: Any process in which a host organism activates or increases the frequency, rate or extent of viral transcription, the synthesis of either RNA on a template of DNA or DNA on a template of RNA.


negative regulation of hypersensitivity

description: Any process that stops, prevents, or reduces the frequency, rate, or extent of hypersensitivity.


name: perturbation of platelet aggregation in another organism

description: The process in which an organism effects a change that affects platelet aggregation in another organism. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.


name: symbiont-mediated suppression of host exocytosis

description: A process in which a symbiont inhibits or disrupts the normal execution of  host exocytosis. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: positive regulation of vascular associated smooth muscle cell migration

description: Any process that activates or increases the frequency, rate or extent of vascular associated smooth muscle cell migration.


reciprocal meiotic recombination

description: The cell cycle process in which double strand breaks are formed and repaired through a single or double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.


name: negative regulation of apoptotic process involved in development

description: Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in development.


name: regulation of transmembrane transporter activity

description: Any process that modulates the frequency, rate or extent of transmembrane transporter activity.


name: positive regulation of cell communication

description: Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.


oncogene-induced cell senescence

description: A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.


cellular response to interleukin-11

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-11 stimulus.


name: base-excision repair, AP site formation via deaminated base removal

description: A base-excision repair, AP site formation process occurring via excision of a deaminated base.


protein autophosphorylation

description: The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).


name: acetate:monoatomic cation symporter activity

description: Enables the transfer of acetate from one side of a membrane to the other according to the reaction: acetate(out) + cation(out) = acetate(in) + cation(in).


eye pigment biosynthetic process

description: The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.


pronuclear fusion

description: The merging of two pronuclei in a fertilized egg to fuse and produce a single zygotic genome.


neuron projection development

description: The process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).


negative regulation of ERK5 cascade

description: Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.


cephalosporin C metabolic process

description: The chemical reactions and pathways involving cephalosporin C.


name: long-chain fatty-acyl-CoA catabolic process

description: The chemical reactions and pathways resulting in the breakdown of long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.


name: intrinsic apoptotic signaling pathway in response to nitrosative stress

description: The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to nitrosative stress; a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.


name: symbiont-mediated suppression of host immunoglobulin-mediated immune response

description: A process in which a symbiont interferes with, inhibits or disrupts the normal execution of the immunoglobulin-mediated immune response of the host organism. One common mechanism by which this happens is the direct inhibition of immunoglobulin activity, by direct binding or modification. The host is defined as the larger of the organisms involved in a symbiotic interaction.


DNA replication, removal of RNA primer

description: Removal of the Okazaki RNA primer from the lagging strand of replicating DNA, by a combination of the actions of DNA polymerase, DNA helicase and an endonuclease.


name: acetyl-CoA biosynthetic process from pantothenate

description: The chemical reactions and pathways resulting in the formation of acetyl-CoA from pantothenate via phosphopantothenate and CoA.


sterigmatocystin catabolic process

description: The chemical reactions and pathways resulting in the breakdown of sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.


mannan catabolic process

description: The chemical reactions and pathways resulting in the breakdown of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.


anatomical structure development

description: The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.


retinoic acid metabolic process

description: The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A.


name: enzyme-directed rRNA pseudouridine synthesis

description: The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.


purine nucleoside biosynthetic process

description: The chemical reactions and pathways resulting in the formation of any purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).


name: negative regulation of pectin catabolic process

description: Any process that stops, prevents or reduces the frequency, rate or extent of pectin catabolic process.


protein-heme linkage

description: The covalent linkage of heme and a protein.


name: regulation of granulosa cell apoptotic process

description: Any process that modulates the frequency, rate or extent of granulosa cell apoptotic process.


name: regulation of cell chemotaxis to fibroblast growth factor

description: Any process that modulates the frequency, rate or extent of cell chemotaxis to fibroblast growth factor.


name: negative regulation of hepatocyte growth factor receptor signaling pathway

description: Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.


name: positive regulation of cyclodextrin catabolic process

description: Any process that activates or increases the frequency, rate or extent of cyclodextrin catabolic process.


name: symbiont-mediated cytolysis of host cell

description: A process mediated by a symbiont that results in the death of a host cell by means of the rupture of cell membranes and the loss of cytoplasm. The host is defined as the larger of the organisms involved in a symbiotic interaction.


monoatomic cation channel activity

description: Enables the energy-independent facilitated diffusion of a monoatomic cation through a transmembrane aqueous pore or channel.


motor neuron apoptotic process

description: Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.


name: compound eye retinal cell programmed cell death

description: Programmed cell death that occurs in the retina to remove excess cells between ommatidia, thus resulting in a hexagonal lattice, precise with respect to cell number and position surrounding each ommatidium.


membrane lipid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane.


name: netrin receptor activity involved in chemorepulsion

description: Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to contribute to the directed movement of a motile cell away from a higher concentration of netrin.


small molecule binding

description: Binding to a small molecule, any low molecular weight, monomeric, non-encoded molecule.


name: reorganization of cellular membranes to establish viral sites of replication

description: A process in intracellular membranes are reorganized by viral proteins that perturb membrane integrity and can cause an extensive rearrangement of cellular membranes, forming membranous webs, which are thought to be the site of replication or certain viruses, for example the HPV virus.


name: anaerobic purine nucleobase catabolic process

description: The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.


retinal cell apoptotic process

description: Any apoptotic process in a retinal cell.


AGC codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes an AGC codon.


name: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process

description: The chemical reactions and pathways involving CMP-keto-3-deoxy-D-manno-octulosonic acid, a substance composed of the acidic sugar 3-deoxy-D-manno-octulosonic acid in glycosidic linkage with cytidine monophosphate.


cellular response to virus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.


glycine catabolic process to creatine

description: The chemical reactions and pathways resulting in the breakdown of glycine into other compounds, including creatine.


name: formation of extrachromosomal circular DNA

description: Excision from the chromosome and circularization of a region of chromosomal DNA, generally, but not always, via homologous recombination between direct tandem repeats.


name: positive regulation of cation transmembrane transport

description: Any process that activates or increases the frequency, rate or extent of cation transmembrane transport.


name: protein-FAD linkage via 3'-(8alpha-FAD)-L-histidine

description: The formation of a protein-FAD linkage via 3'-(8-alpha-FAD)-L-histidine.


ether catabolic process

description: The chemical reactions and pathways resulting in the breakdown of ether.


vesicle scission

description: The membrane scission process that is the final step in the formation of a vesicle, leading to separation from its parent membrane. Vesicle scission involves the constriction of a neck-forming protein complex, consisting e.g. of dynamin, around the budded membrane, leading to vesicle closure during its separation from the parent membrane.


nonadec-1-ene metabolic process

description: The chemical reactions and pathways involving nonadec-1-ene.


name: positive regulation of cytokinin-activated signaling pathway

description: Any process that activates or increases the frequency, rate or extent of cytokinin signaling.


cellular response to interleukin-15

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.


creatinine metabolic process

description: The chemical reactions and pathways involving creatinine, 2-amino-1,5-dihydro-1-methyl-4H-imidazol-4-one, an end product of creatine metabolism and a normal constituent of urine.


name: molybdenum incorporation via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)

description: The incorporation of molybdenum into a protein via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).


name: cell-cell signaling involved in metanephros development

description: Any process that mediates the transfer of information from one cell to another and contributes to the progression of the metanephros over time, from its formation to the mature organ.


name: host response to induction by symbiont of tumor, nodule or growth in host

description: Any process that results in a change in the state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the formation of an abnormal mass of cells in the host organism, induced by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: positive regulation of natural killer cell mediated cytotoxicity

description: Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity.


name: monoatomic cation transmembrane transporter activity

description: Enables the transfer of cation from one side of a membrane to the other.


pseurotin A catabolic process

description: The chemical reactions and pathways resulting in the breakdown of pseurotin A.


name: regulation of tetrapyrrole catabolic process

description: Any process that modulates the frequency, rate or extent of tetrapyrrole catabolic process.


geraniol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of geraniol.


name: alanine:sodium symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: alanine(out) + Na+(out) = alanine(in) + Na+(in).


name: envenomation resulting in slowing of activation kinetics of voltage-gated potassium channel in another organism

description: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant slowing of the activation kinetics of the activity of a voltage-gated potassium channel in the bitten/stung organism.


RNA modification

description: The covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically.


name: fungal-type cell wall (1->3)-alpha-glucan biosynthetic process

description: The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in fungal-type cell walls, including those of ascospores.


name: negative regulation of mitotic cytokinetic process

description: Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinetic process.


mitochondrion DNA recombination

description: Any DNA recombination that takes place in mitochondrion.


(S)-scoulerine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of (S)-scoulerine.


poly(U) RNA binding

description: Binding to a sequence of uracil residues in an RNA molecule.


high-affinity IgG receptor activity

description: Combining with high affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


peptidyl-arginine methylation

description: The addition of a methyl group to an arginine residue in a protein.


name: trans-synaptic signaling by endocannabinoid

description: Cell-cell signaling in either direction across the synaptic cleft, mediated by an endocannabinoid ligand.


cyanide catabolic process

description: The chemical reactions and pathways resulting in the breakdown of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.


tyramine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of tyramine.


peptide pheromone maturation

description: The generation of a mature, active peptide pheromone via processes unique to its processing and modification. An example of this process is found in Saccharomyces cerevisiae.


cardiolipin metabolic process

description: The chemical reactions and pathways involving cardiolipin, 1,3-bis(3-phosphatidyl)glycerol.


name: deoxyribose phosphate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.


regulation of monoatomic ion transport

description: Any process that modulates the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


farnesyltranstransferase activity

description: Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate.


name: regulation of nucleoside metabolic process

description: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.


name: 23S rRNA (adenosine(1067)-2'-O)-methyltransferase activity

description: Catalysis of the reaction: adenosine(1067) in 23S rRNA + S-adenosyl-L-methionine = 2'-O-methyladenosine(1067) in 23S rRNA + H+ + S-adenosyl-L-homocysteine.


sarcomere organization

description: The myofibril assembly process that results in the organization of muscle actomyosin into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.


regulation of transporter activity

description: Any process that modulates the activity of a transporter.


name: VEGF-activated platelet-derived growth factor receptor-alpha signaling pathway

description: The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to an alpha-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


interleukin-21 receptor activity

description: Combining with interleukin-21 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


L-fucose biosynthetic process

description: The chemical reactions and pathways resulting in the formation of L-fucose (6-deoxy-L-galactose).


name: lysine biosynthetic process via diaminopimelate

description: The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate.


name: luteinizing hormone signaling pathway involved in ovarian follicle development

description: The series of molecular signals initiated by luteinizing hormone binding to a receptor, where the activated receptor signals via downstream effectors that contribute to progression of the ovarian follicle over time, from its formation to the mature structure.


name: regulation of neutrophil apoptotic process

description: Any process that modulates the frequency, rate, or extent of neutrophil apoptotic process.


name: indoleacetic acid ester conjugate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of an indole-3-acetic acid amide conjugate, a form of indoleacetic acid covalently bound to an a sugar or polyol through an ester bond.


alpha-pinene metabolic process

description: The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.


dimethylallylcistransferase activity

description: Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + neryl diphosphate.


name: activation of plasma proteins involved in acute inflammatory response

description: Any process activating plasma proteins by proteolysis as part of an acute inflammatory response.


name: calcium-induced calcium release activity involved in regulation of presynaptic cytosolic calcium ion concentration

description: Any calcium-induced calcium release activity that is involved in regulation of presynaptic cytosolic calcium ion concentration.


name: cellular response to prostaglandin I stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin I stimulus.


dolichol metabolic process

description: The chemical reactions and pathways involving dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.


name: endocardial cushion to mesenchymal transition involved in heart chamber septation

description: A transition where an endocardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of the heart septum.


peptidyl-lysine palmitoylation

description: The palmitoylation of peptidyl-lysine to form peptidyl-N6-palmitoyl-L-lysine.


name: dicarboxylic acid transmembrane transporter activity

description: Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.


name: regulation of endodeoxyribonuclease activity

description: Any process that modulates the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.


cellular lipid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of lipids, as carried out by individual cells.


all-trans-neoxanthin metabolic process

description: The chemical reactions and pathways involving all-trans-neoxanthin.


name: cellular response to chondroitin 4'-sulfate

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.


name: regulation of glucomannan catabolic process

description: Any process that modulates the frequency, rate or extent of glucomannan catabolic process.


protein localization to P-body

description: Any process in which a protein is transported to, or maintained at, a P-body.


description: The chemical reactions and pathways resulting in the breakdown of 3-(3-hydroxy)phenylpropionate, a hydroxylated derivative of phenylpropionate.


dCDP metabolic process

description: The chemical reactions and pathways involving dCDP, deoxycytidine 5'-diphosphate.


vasopressin receptor activity

description: Combining with vasopressin to initiate a change in cell activity.


name: cellular response to isoquinoline alkaloid

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.


name: negative regulation of osteoclast development

description: Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast development.


name: galactitol transmembrane transporter activity

description: Enables the transfer of a galactitol from one side of a membrane to the other. Galactitol is the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.


chloroplast-nucleus signaling pathway

description: The process in which a molecular signal is transduced between the chloroplast and nucleus, such that expression of nuclear encoding photosynthetic proteins is coupled with chloroplast biogenesis.


cellulose metabolic process

description: The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.


vesicle fusion to plasma membrane

description: Fusion of the membrane of a vesicle with the plasma membrane, thereby releasing its contents into the extracellular space.


name: positive regulation of adaptive immune effector response

description: Any process that activates or increases the frequency, rate or extent of adaptive immune effector response.


GABA-A receptor activity

description: Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels.


gerfelin catabolic process

description: The chemical reactions and pathways resulting in the breakdown of gerfelin.


name: solute:proton symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(out) = solute(in) + H+(in).


ecgonine methyl ester catabolic process

description: The chemical reactions and pathways resulting in the breakdown of ecgonine methyl ester.


name: retrograde trans-synaptic signaling by lipid

description: Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a lipid ligand.


peptide amidation

description: The posttranslational conversion of C-terminal glycine-extended peptides to C-terminal alpha-amidated peptides. Occurs to over half of all peptide hormones to give bioactive peptides. This is a two step process catalyzed by a peptidyl-glycine alpha-hydroxylating monooxygenase and a peptidyl-alpha-hydroxyglycine alpha-amidating lyase. In some organisms, this process is catalyzed by two separate enzymes, whereas in higher organisms, one polypeptide catalyzes both reactions.


biofilm matrix assembly

description: A process that results in the assembly of a biofilm matrix.


name: cADPR-sensitive calcium-release channel activity

description: Enables the transmembrane transfer of a calcium ion by a channel that opens when cyclic adenosine diphosphate ribose (cADPR) has been bound by the channel complex or one of its constituent parts.


name: VEGF-activated platelet-derived growth factor receptor signaling pathway

description: The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


name: GSI anchor biosynthetic process via N-seryl-glycosylsphingolipidinositolethanolamine

description: The formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


multi-species biofilm formation

description: A process in which planktonically growing microorganisms of different species grow at a liquid-air interface or on a solid substrate under the flow of a liquid and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


cellular response to raffinose

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.


cellular response to L-ascorbic acid

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-ascorbic acid (vitamin C) stimulus.


plastid translation

description: The chemical reactions and pathways resulting in the formation of a protein in a plastid. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the plastid has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.


interleukin-27 receptor activity

description: Combining with interleukin-27 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


name: maternal process involved in parturition

description: A reproductive process occurring in the mother that results in birth.


brevianamide F biosynthetic process

description: The chemical reactions and pathways resulting in the formation of brevianamide F. Brevianamide F is the biosynthetic precursor of a large family of biologically active prenylated tryptophan-proline 2,5-diketopiperazines that are produced by some fungi.


name: cell wall macromolecule metabolic process

description: The chemical reactions and pathways involving macromolecules forming, or destined to form, part of the cell wall. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.


name: ribonucleoside triphosphate phosphatase activity

description: Catalysis of the reaction: a ribonucleoside triphosphate + H2O = a ribonucleoside diphosphate + H+ + phosphate.


response to manganese ion

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.


protein-containing complex assembly

description: The aggregation, arrangement and bonding together of a set of macromolecules to form a protein-containing complex.


name: protein localization to spindle pole body

description: A process in which a protein is transported to, or maintained at, the spindle pole body.


cytosolic ribosome assembly

description: The aggregation, arrangement and bonding together of the large and small ribosomal subunits into a functional cytosolic ribosome. Distinct stages of this process take place first in the nucleolus, then in the nucleus and finally in the cytosol.


hexosyltransferase activity

description: Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).


D-lysine metabolic process

description: The chemical reactions and pathways involving D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.


stem cell factor receptor activity

description: Combining with stem cell factor (SCF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate. Stem cell factor is a cytokine that stimulates mast cell growth and differentiation.


name: cellular response to boron-containing substance levels

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of boron-containing substances.


name: positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway

description: Any process that activates or increases the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.


positive regulation of DNA repair

description: Any process that activates or increases the frequency, rate or extent of DNA repair.


glucuronoarabinoxylan catabolic process

description: The chemical reactions and pathways resulting in the breakdown of a glucuronoarabinoxylan.


oncostatin-M-mediated signaling pathway

description: The series of molecular signals initiated by oncostatin-M (OSM) binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. OSM can signal via at least two different receptors (a specific receptor and a LIF receptor) to activate different downstream signal transduction pathways.


4-nitrotoluene catabolic process

description: The chemical reactions and pathways resulting in the breakdown of 4-nitrotoluene, 1-methyl-4-nitrobenzene.


formation of primary germ layer

description: The formation of the ectoderm, mesoderm and endoderm during gastrulation.


name: peptidyl-tyrosine dehydrogenation to form (E)-2,3-didehydrotyrosine

description: The oxidation of the C alpha-C beta bond of peptidyl-tyrosine to form peptidyl-(E)-2,3-didehydrotyrosine coupled with cyclization of neighboring residues.


name: histone H2AQ104 methyltransferase activity

description: Catalysis of the reaction: S-adenosyl-L-methionine + (histone H2A)-glutamine (position 104) = S-adenosyl-L-homocysteine + (histone H2A)-N5-methyl-glutamine (position 104). Note that this corresponds to Q105 in yeast.


phytosteroid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of phytosteroids, steroids that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.


name: positive regulation of G1 to G0 transition

description: Any process that activates or increases the frequency, rate or extent of G1 to G0 transition.


nitrate assimilation

description: The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.


ACG codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes an ACG codon.


name: serine-based site-specific recombinase activity

description: Catalysis of the formation of new phosphodiester bonds between a pair of short, unique DNA target sequences; occurs through a phosphoseryl intermediate in which the target sequence is first cleaved by the nucleophilic attack by a serine in the active site.


seed trichome maturation

description: A developmental process, independent of morphogenetic (shape) change, that is required for a seed trichome to attain its fully functional state.


cellular response to cGMP

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cGMP (cyclic GMP, guanosine 3',5'-cyclophosphate) stimulus.


succinate metabolic process

description: The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle.


name: positive regulation of calcium-mediated signaling

description: Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling.


name: regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway

description: Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.


name: pantothenate:sodium symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: pantothenate(out) + Na+(out) = pantothenate(in) + Na+(in).


calcium-mediated signaling

description: Any intracellular signal transduction in which the signal is passed on within the cell via calcium ions.


DNA geometric change

description: The process in which a transformation is induced in the geometry of a DNA double helix, resulting in a change in twist, writhe, or both, but with no change in linking number. Includes the unwinding of double-stranded DNA by helicases.


polycistronic mRNA processing

description: The conversion of a primary mRNA transcript containing more than one complete protein-coding region into individual mature mRNA molecules.


name: regulation of heart rate by cardiac conduction

description: A cardiac conduction process that modulates the frequency or rate of heart contraction.


macromolecule localization

description: Any process in which a macromolecule is transported to, or maintained in, a specific location.


cellular heat acclimation

description: Any process that increases heat tolerance of a cell in response to high temperatures.


GCG codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes a GCG codon.


ferroptosis

description: A programmed cell death characterized morphologically by the presence of smaller than normal mitochondria with condensed mitochondrial membrane densities, reduction or vanishing of mitochondria crista, and outer mitochondrial membrane rupture. Activation of mitochondrial voltage-dependent anion channels and mitogen-activated protein kinases, upregulation of endoplasmic reticulum stress, and inhibition of cystine/glutamate antiporter are involved in the induction of ferroptosis. This process is characterized by the accumulation of lipid peroxidation products and lethal reactive oxygen species (ROS) derived from iron metabolism. Glutathione peroxidase 4 (GPX4), heat shock protein beta-1, and nuclear factor erythroid 2-related factor 2 function as negative regulators of ferroptosis by limiting ROS production and reducing cellular iron uptake, respectively. In contrast, NADPH oxidase and p53 act as positive regulators of ferroptosis by promotion of ROS production and inhibition of expression of SLC7A11 (a specific light-chain subunit of the cystine/glutamate antiporter), respectively. Misregulated ferroptosis has been implicated in multiple physiological and pathological processes.


name: negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate or extent of the adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway.


alpha-glucan metabolic process

description: The chemical reactions and pathways involving alpha-glucans, compounds composed of glucose residues linked by alpha-D-glucosidic bonds.


name: symbiont-mediated evasion of recognition by host innate immune effector

description: A process by which a symbiont mitigates the effects of recognition by a host innate immune effector. Effectors have a direct activity against a symbiont and include complement, antimicrobial peptides, and bacterial restriction enzymes. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: translocation of molecules into symbiont

description: The directed movement of molecule(s) produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.


Z-phenylacetaldoxime catabolic process

description: The chemical reactions and pathways resulting in the breakdown of Z-phenylacetaldoxime, a member of the glucosinolate group of compounds.


Group I intron splicing

description: The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).


globoside biosynthetic process

description: The chemical reactions and pathways resulting in the formation of a ceramide with a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I).


alkaloid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of alkaloids, nitrogen-containing natural products which are not otherwise classified as nonprotein amino acids, amines, peptides, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones, or primary metabolite (such as purine or pyrimidine bases).


name: 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).


cellular response to biotic stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.


biofilm matrix disassembly

description: A process that results in the disassembly of a biofilm matrix.


description: Catalysis of the reaction: phenylacetyl-CoA + isopenicillin N + H2O = CoA + penicillin G + L-2-aminohexanedioate.


response to herbivore

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.


name: poly(ribitol phosphate) teichoic acid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of poly(ribitol phosphate) teichoic acid.


L-histidine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.


dUDP catabolic process

description: The chemical reactions and pathways resulting in the breakdown of dUDP, deoxyuridine (5'-)diphosphate.


sweet taste receptor activity

description: Combining with soluble sweet compounds to initiate a change in cell activity. These receptors are responsible for the sense of sweet taste.


amino sugar metabolic process

description: The chemical reactions and pathways involving any amino sugar, sugars containing an amino group in place of a hydroxyl group.


name: negative regulation of mitochondrial membrane permeability involved in apoptotic process

description: Any negative regulation of mitochondrial membrane permeability that is involved in apoptotic process.


description: Catalysis of the reaction: 5-aminomethyl-2-thiouridine34 in tRNA + S-adenosyl-L-methionine = 5-methylaminomethyl-2-thiouridine34 in tRNA + H+ + S-adenosyl-L-homocysteine. This enzyme specifically adds the terminal methyl group of 5-[(methylamino)methyl]-2-thiouridylate.


nuclease activity

description: Catalysis of the hydrolysis of ester linkages within nucleic acids.


name: negative regulation of SMAD protein signal transduction

description: Any process that decreases the rate, frequency or extent of the SMAD protein signaling pathway.


name: transport of virus in host, tissue to tissue

description: The transport of a virus between tissues in a multicellular organism.


name: regulation of plant-type hypersensitive response

description: Any endogenous process that modulates the frequency, rate or extent of the plant hypersensitive response.


phenol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of phenol, a compound that consists of a benzene ring with one attached hydroxyl group.


interleukin-27 production

description: The appearance of interleukin-27 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: negative regulation of siderophore biosynthetic process

description: Any process that stops, prevents or reduces the frequency, rate or extent of siderophore biosynthetic process.


response to glucagon

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucagon stimulus.


branchiomotor neuron axon guidance

description: The process in which a branchiomotor neuron growth cone is directed to a specific target site. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.


name: positive regulation of leukocyte mediated cytotoxicity

description: Any process that activates or increases the frequency, rate or extent of leukocyte mediated cytotoxicity.


protein phosphopantetheinylation

description: The modification of a protein amino acid by phosphopantetheinylation.


name: peptidyl-histidine uridylylation, to form peptidyl-1'-(phospho-5'-uridine)-L-histidine

description: The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine).


peptidyl-tyrosine adenylylation

description: The adenylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-adenosine)-L-tyrosine.


name: epicardial cell to mesenchymal cell transition

description: A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell. The epicardium is a part of the pericardium.


glycerol metabolic process

description: The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.


name: positive regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation

description: Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.


diterpene phytoalexin metabolic process

description: The chemical reactions and pathways involving diterpene phytoalexins, a class of diterpene formed in plants in response to fungal infection, physical damage, chemical injury, or a pathogenic process; they are sometimes referred to as plant antibiotics. Diterpenes are unsaturated hydrocarbons containing 20 carbon atoms and 4 branched methyl groups and are made up of isoprenoid units.


name: protein-dermatan sulfate linkage via dermatan 4-sulfate D-glucuronyl-D-galactosyl-D-galactosyl-D-xylosyl-L-serine

description: Dermatan sulfate components are covalently linked to a core glycoprotein via O-glycosidic linkages between xylose and serine residues.


heme O biosynthetic process

description: The chemical reactions and pathways resulting in the formation of heme O, a derivative of heme containing a 17-carbon hydroxyethylfarnesyl side chain at position 8 of the tetrapyrrole macrocycle.


name: positive regulation of DNA damage checkpoint

description: Any process that activates or increases the frequency, rate or extent of a DNA damage checkpoint.


plasma membrane raft assembly

description: The aggregation, arrangement and bonding together of a set of components to form a plasma membrane raft.


name: sodium ion transmembrane transporter activity

description: Enables the transfer of sodium ions (Na+) from one side of a membrane to the other.


maturation of 2S rRNA

description: Any process involved in the maturation of a precursor 2S ribosomal RNA (rRNA) molecule into a mature 2S rRNA molecule.


name: positive regulation of nutrient release by symbiont

description: Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.


name: thiamine diphosphate phosphatase activity

description: Catalysis of the reaction: thiamine diphosphate + H2O = thiamine monophosphate + phosphate.


penetration of zona pellucida

description: The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.


peroxidase-heme linkage

description: The covalent linkage of heme to peroxidase.


viral DNA genome packaging, headful

description: The encapsulation of the viral genome within the capsid where DNA is packaged into the capsid until the capsid is full.


name: positive regulation of double-strand break repair via nonhomologous end joining

description: Any process that activates or increases the frequency, rate or extent of double-strand break repair via nonhomologous end joining.


name: pyrimidine-containing compound metabolic process

description: The chemical reactions and pathways involving a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.


name: positive regulation of interleukin-1-mediated signaling pathway

description: Any process that activates or increases the frequency, rate or extent of interleukin-1-mediated signaling pathway.


name: mucilage biosynthetic process involved in seed coat development

description: The chemical reactions and pathways resulting in the formation of mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.


name: receptor-mediated bacteriophage reversible attachment to host cell

description: Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.


name: regulation of mitotic spindle pole body separation

description: Any process that modulates the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.


name: symbiont-mediated perturbation of host autophagy

description: A process in which a symbiont alters or subverts autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.


hexose mediated signaling

description: The series of molecular signals mediated by the detection of hexose.


name: RNA 2'-O-ribose methylation guide activity

description: Specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.


name: positive regulation of neuronal signal transduction

description: Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.


name: positive regulation of chromosome segregation

description: Any process that activates or increases the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.


name: apoptotic process involved in endocardial cushion morphogenesis

description: Any apoptotic process that contributes to the shaping of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.


name: disruption of cell wall in another organism

description: The disruption of the cell wall of another organism, leading to damage or temporary subversion of the cell wall.


dibenzothiophene metabolic process

description: The chemical reactions and pathways involving dibenzothiophene, a substance composed of two benzene rings linked by one sulfide bond and one carbon-carbon bond. Dibenzothiophene derivatives can be detected in diesel oil following hydrodesulfurization treatment to remove sulfur compounds that would otherwise generate sulfur oxides during combustion.


response to nitrogen compound

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.


pheromone receptor activity

description: Combining with a pheromone to initiate a change in cell activity. A pheromone is a substance used in olfactory communication between organisms of the same species eliciting a change in sexual or social behavior.


name: RNA polymerase II C-terminal domain S7 O-GlcNAc transferase activity

description: Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 7).


name: regulation of podocyte apoptotic process

description: Any process that modulates the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.


name: positive regulation of pectin catabolic process

description: Any process that activates or increases the frequency, rate or extent of pectin catabolic process.


name: L-lysine catabolic process to acetyl-CoA

description: The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including acetyl-CoA.


name: positive regulation of type II interferon-mediated signaling pathway

description: Any process that increases the rate, frequency or extent of an interferon-gamma-mediated signaling pathway.


F420-0 metabolic process

description: The chemical reactions and pathways involving F420-0 (5-O-{[(1S)-1-carboxyethoxy](hydroxy)phosphoryl}-1-deoxy-1-(8-hydroxy-2,4-dioxo-2H-pyrimido[4,5-b]quinolin-10(4H)-yl)-D-ribitol), the fragment of coenzyme F420 remaining after formal hydrolytic removal of all of the glutamate residues.


name: hemolysis by symbiont of host erythrocytes

description: The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in the host organism by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.


dodecyl sulfate metabolic process

description: The chemical reactions and pathways involving dodecyl sulfate, commonly found as sodium dodecyl sulfate (SDS), a component of a variety of synthetic surfactants.


MHC class I biosynthetic process

description: The chemical reactions and pathways resulting in the formation of major histocompatibility protein class I.


response to trichostatin A

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichostatin A stimulus.


name: DNA double-strand break processing involved in repair via synthesis-dependent strand annealing

description: The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via synthesis-dependent strand annealing.


name: nucleobase-containing compound catabolic process

description: The chemical reactions and pathways resulting in the breakdown of nucleobases, nucleosides, nucleotides and nucleic acids.


L-proline betaine metabolic process

description: The chemical reactions and pathways involving stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline found in alfalfa, chrysanthemum, and citrus plants.


name: L-methionine biosynthetic process from L-homoserine via cystathionine

description: The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including L-homoserine, via the intermediate cystathionine.


cyanate metabolic process

description: The chemical reactions and pathways involving cyanate, NCO-, the anion of cyanic acid.


name: phosphatidylcholine biosynthesis from sn-glycero-3-phosphocholine

description: The phosphatidylcholine biosynthetic process that involves the two-step acylation of sn-glycero-3-phosphocholine to a phosphatidylcholine.


name: peptidyl-beta-carboxyaspartic acid biosynthetic process from peptidyl-aspartic acid

description: The chemical reactions and pathways resulting in the formation of peptidyl-beta-carboxyaspartic acid from other compounds, including peptidyl-aspartic acid.


hypoxanthine salvage

description: Any process that generates hypoxanthine, 6-hydroxy purine, from derivatives of it without de novo synthesis.


L-methionine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid.


bile acid:sodium symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in).


extracellular structure organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.


cellular response to interleukin-13

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-13 stimulus.


name: serine family amino acid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.


name: apoptotic process involved in morphogenesis

description: Any apoptotic process that contributes to the shaping of an anatomical structure.


RNA repair

description: Any process that results in the repair of damaged RNA.


cellular response to acrylamide

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acrylamide stimulus.


dCDP biosynthetic process

description: The chemical reactions and pathways resulting in the formation of dCDP, deoxycytidine 5'-diphosphate.


fructoseglycine metabolic process

description: The chemical reactions and pathways involving fructoseglycine, a fructose molecule containing a glycine group in place of a hydroxyl group.


plasmodesma organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a plasmodesma, a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.


name: conversion of glutamyl-tRNA to glutaminyl-tRNA

description: The modification process that results in the conversion of glutamate charged on a tRNA(Gln) to glutaminyl-tRNA.


D-glucuronate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of D-glucuronate, the D-enantiomer of glucuronate.


pyochelin metabolic process

description: The chemical reactions and pathways involving the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).


alpha-pinene catabolic process

description: The chemical reactions and pathways resulting in the breakdown of alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature.


name: negative regulation of response to external stimulus

description: Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus.


ornithine catabolic process

description: The chemical reactions and pathways resulting in the breakdown of ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.


name: positive regulation of fibroblast apoptotic process

description: Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process.


pheromone catabolic process

description: The chemical reactions and pathways resulting in the breakdown of pheromones, a substance that is secreted and released by an organism and detected by a second organism of the same or a closely related species, in which it causes a specific reaction, such as a definite behavioral reaction or a developmental process.


detection of calcium ion

description: The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal.


vesicle coating

description: A protein coat is added to the vesicle to form the proper shape of the vesicle and to target the vesicle for transport to its destination.


cellular response to vitamin K

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin K stimulus.


name: positive regulation of hippocampal neuron apoptotic process

description: Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in hippocampal neurons.


description: Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,6 alpha-D-galactosyl-lipopolysaccharide.


name: negative regulation of macrophage differentiation

description: Any process that stops, prevents, or reduces the frequency, rate or extent of macrophage differentiation.


myosin II filament assembly

description: The formation of a bipolar filament composed of myosin II molecules.


name: regulation of apoptotic process involved in development

description: Any process that modulates the frequency, rate or extent of apoptotic process involved in development.


name: negative regulation of centriole elongation

description: Any process that stops, prevents or reduces the frequency, rate or extent of centriole elongation.


cellular response to chemical stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus.


pinene metabolic process

description: The chemical reactions and pathways involving the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.


nuclear pore localization

description: Any process in which nuclear pores are transported to, or maintained in, a specific location.


name: membrane depolarization during ventricular cardiac muscle cell action potential

description: The process in which ventricular cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.


sphingosine N-acyltransferase activity

description: Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine.


interleukin-25 production

description: The appearance of interleukin-25 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: negative regulation of lipid metabolic process

description: Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipids.


name: endonucleolytic cleavage between SSU-rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)

description: Endonucleolytic cleavage to separate a pre-SSU-rRNA from a pre-LSU-rRNA originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.


I-kappaB phosphorylation

description: The process of introducing a phosphate group into an inhibitor of kappa B (I-kappaB) protein. Phosphorylation of I-kappaB targets I-kappaB for ubiquitination and proteasomal degradation, thus releasing bound NF-kappaB dimers, which can translocate to the nucleus to bind DNA and regulate transcription.


name: embryonic development via the syncytial blastoderm

description: The process whose specific outcome is the progression of the embryo over time, from zygote formation through syncytial blastoderm to the hatching of the first instar larva. An example of this process is found in Drosophila melanogaster.


description: Catalysis of the reaction: acetyl-CoA + kanamycin B = N(6')-acetylkanamycin B + CoA + H+. This is acetylation of the 6'-amino group of the 6-deoxy-6-aminoglucose ring.


naphthalenesulfonate metabolic process

description: The chemical reactions and pathways involving naphthalenesulfonate, sulfonated derivatives of naphthalene.


name: regulation of cilium-dependent cell motility

description: Any process that modulates the frequency, rate or extent of cilium-dependent cell motility.


catalytic activity

description: Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.


name: negative regulation of non-canonical Wnt signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate or extent of non-canonical Wnt signaling pathway.


description: The process of coupling leucine to leucyl-tRNA in a mitochondrion, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.


name: negative regulation of abscisic acid-activated signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate or extent of abscisic acid (ABA) signaling.


macromolecule biosynthetic process

description: The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.


3-chlorocatechol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of 3-chlorocatechol.


protein autoprocessing

description: Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.


sperm axoneme assembly

description: The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement.


name: positive regulation of mitotic DNA damage checkpoint

description: Any process that activates or increases the frequency, rate or extent of mitotic DNA damage checkpoint.


description: Catalysis of the reaction: L-phenylalanine + acetyl-CoA = N-acetyl-L-phenylalanine + CoA + H+.


description: Catalysis of the reaction: sucrose + UDP-galactose = 6F-alpha-D-galactosylsucrose + UDP.


description: Catalysis of the reaction: diphospho-1D-myo-inositol polyphosphate + H2O = 1D-myo-inositol polyphosphate + phosphate.


hindgut contraction

description: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the hindgut. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The hindgut is the posterior part of the alimentary canal, including the rectum, and the large intestine.