name: non-classical arabinogalactan protein metabolic process

description: The chemical reactions and pathways involving a cell wall arabinogalactan II glycoprotein where other amino acids besides Hyp, Ala, Ser, Thr and Gly can be present and grouped into regions, such as a Cys-rich or Asn-rich domains.


viral RNA editing

category: biolink:BiologicalProcess biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The process by which bases in viral mRNA are chemically altered during viral transcription. This is usually the incorporation of 1 - 6 additional nucleotides, which shifts the reading frame, allowing the generation of different protein products or through a specific nucleotide change that eliminates the termination codon.


name: 23S rRNA (guanine(2445)-N(2))-methyltransferase activity

category: biolink:MolecularActivity biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(2445) in 23S rRNA = N(2)-methylguanosine(2445) in 23S rRNA + S-adenosyl-L-homocysteine.


cellular response to exogenous dsRNA

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus.


DNA replication termination

description: The process in which DNA replication at a replication fork ceases; occurs when the replication fork reaches a specific termination site or when two replication forks meet.


mannose metabolic process

description: The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.


metalloendopeptidase activity

description: Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.


name: regulation of meiotic cell cycle phase transition

description: Any process that modulates the frequency, rate or extent of meiotic cell cycle phase transition.


poly(G) binding

description: Binding to a sequence of guanine residues in an RNA molecule.


synaptic vesicle to endosome fusion

description: Fusion of a synaptic vesicle with an endosome.


opsonin receptor activity

description: Combining with an opsonin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


L-altrarate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of L-altrarate.


regulation of thymocyte migration

description: Any process that modulates the frequency, rate or extent of thymocyte migration.


spermidine acetylation

description: The modification of spermidine by addition of acetyl groups.


carbon-oxygen lyase activity

description: Catalysis of the breakage of a carbon-oxygen bond.


zinc ion sequestering activity

description: Binding to a zinc ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.


name: methyl-branched fatty acid metabolic process

description: The chemical reactions and pathways involving methyl-branched fatty acids, aliphatic monocarboxylic acids with methyl branches on the main chain.


peptidyl-histidine phosphorylation

description: The phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).


name: negative regulation of interleukin-1-mediated signaling pathway

description: Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-1-mediated signaling pathway.


name: positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation

description: Any process that activates or increases the frequency, rate or extent of differentiation of CD4-positive, CD25-positive, alpha-beta regulatory T cells.


vomilenine glucosyltransferase activity

description: Catalysis of the reaction: UDP-D-glucose + vomilenine = H+ + raucaffricine + UDP.


cellular response to far red light

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.


name: 11-beta-hydroxysteroid dehydrogenase (NADP+) activity

description: Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.


name: plant-type cell wall cellulose metabolic process

description: The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as part of the organization and biogenesis of the cell wall.


name: diphosphoinositol polyphosphate metabolic process

description: The chemical reactions and pathways involving a diphosphoinositol polyphosphate, 1,2,3,4,5,6-cyclohexanehexol with one or more diphosphate groups and multiple monophosphate groups attached.


plastoquinone biosynthetic process

description: The chemical reactions and pathways resulting in the formation of plastoquinone, a lipid-soluble electron-transporting coenzyme present in the chloroplast.


name: positive regulation of ornithine catabolic process

description: Any process that activates or increases the frequency, rate or extent of ornithine catabolic process.


name: neutral, basic amino acid:sodium:chloride symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neutral/basic amino acid(out) + Na+(out) + Cl-(out) = neutral/basic amino acid(in) + Na+(in) + Cl-(in).


glycosylceramide metabolic process

description: The chemical reactions and pathways involving glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group.


glucagon receptor activity

description: Combining with glucagon and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.


dUTP biosynthetic process

description: The chemical reactions and pathways resulting in the formation of dUTP, deoxyuridine (5'-)triphosphate.


name: positive regulation of single-strand break repair via homologous recombination

description: Any process that activates or increases the frequency, rate or extent of single-strand break repair via homologous recombination.


name: regulation of trehalose metabolic process

description: Any process that modulates the frequency, rate or extent of trehalose metabolism, the chemical reactions and pathways involving trehalose, a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.


thermoception

description: The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature).


ammonia oxidation

description: The chemical reactions and pathways by which ammonia or ammonium is converted to molecular nitrogen or another nitrogen compound, with accompanying loss of electrons.


netrin receptor activity

description: Combining with a netrin signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


viral genome replication

description: Any process involved directly in viral genome replication, including viral nucleotide metabolism.


name: positive regulation of intracellular signal transduction

description: Any process that activates or increases the frequency, rate or extent of intracellular signal transduction.


name: isopentenyl diphosphate metabolic process

description: The chemical reactions and pathways involving isopentenyl diphosphate, an isomer of dimethylallyl diphosphate and the key precursor of all isoprenoids.


mycotoxin biosynthetic process

description: The chemical reactions and pathways resulting in the formation of a mycotoxin, any poisonous substance produced by a fungus.


name: pteridine-containing compound metabolic process

description: The chemical reactions and pathways involving any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.


name: glucagon-like peptide 1 receptor activity

description: Combining with glucagon-like peptide 1 and transmitting the signal across the membrane by activating an associated G-protein.


name: stromal-epithelial cell signaling involved in prostate gland development

description: The process of transferring information from a stromal cell to an epithelial cell where it is received and interpreted, as part of prostate gland development.


P granule assembly

description: The aggregation, arrangement and bonding together of a set of components to form a P granule.


regulation of lymphocyte activation

description: Any process that modulates the frequency, rate or extent of lymphocyte activation.


plastid inner membrane organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the inner membrane of a plastid.


name: negative regulation of collagen catabolic process

description: Any process that decreases the rate, frequency or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.


beta-alanine metabolic process

description: The chemical reactions and pathways involving beta-alanine (3-aminopropanoic acid), an achiral amino acid and an isomer of alanine. It occurs free (e.g. in brain) and in combination (e.g. in pantothenate) but it is not a constituent of proteins.


pigment granule organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pigment granule.


name: chemoattraction of branchiomotor neuron axon in branchial arch mesenchyme

description: The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme in response to an attractive chemical cue. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.


alginic acid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of alginic acid, a hydrophilic polysaccharide occurring in, for example, the cell walls of brown algae (brown seaweeds).


name: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene

description: The series of reactions in which 9,9'-di-cis-zeta-carotene is desaturated to 7,9,9'-tri-cis-neurosporene, and then 7,9,7',9'-tetra-cis-lycopene. The overall reaction for this process is: 9,9'-di-cis-zeta-carotene + 2 quinone = 2 quinol + 7,9,7',9'-tetra-cis-lycopene.


tumor necrosis factor receptor activity

description: Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function.


stress-induced premature senescence

description: A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.


description: Catalysis of the reaction: S-adenosyl-L-methionine + m(7)G(5')pppAm = S-adenosyl-L-homocysteine + m(7)G(5')pppm(6)Am.


description: Catalysis of the reaction: ADP-glucose + H2O = AMP + glucose-1-phosphate.


uridine to cytidine editing

description: The conversion of a uridine residue to cytosine in an RNA molecule by amination.


betaine aldehyde metabolic process

description: The chemical reactions and pathways involving betaine aldehyde.


name: copper incorporation into metallo-sulfur cluster

description: The incorporation of copper into a metallo-sulfur cluster.


anthranilate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of anthranilate (2-aminobenzoate).


protein nitrosylation

description: The covalent addition of a nitric oxide group to an amino acid within a protein.


protein trans-autophosphorylation

description: The phosphorylation by a protein of a residue on an identical protein. For example, phosphorylation by the other kinase within a homodimer.


name: GPI anchor biosynthetic process via N-asparaginyl-glycosylphosphatidylinositolethanolamine

description: The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-asparagine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a asparaginyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


membrane invagination

description: The infolding of a membrane.


description: Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.


name: cell wall (1->3)-alpha-glucan metabolic process

description: The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.


selenoneine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of selenoneine.


name: negative regulation of Schwann cell chemotaxis

description: Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell chemotaxis.


protein localization to plasma membrane

description: A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.


prenol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.


name: single-stranded 3'-5' DNA helicase activity

description: Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of the DNA helix in the direction 3' to 5'.


galactose catabolic process

description: The chemical reactions and pathways resulting in the breakdown of galactose, the aldohexose galacto-hexose.


mitotic cell cycle phase

description: One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.


name: negative regulation of myeloid leukocyte differentiation

description: Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte differentiation.


name: light-independent bacteriochlorophyll biosynthetic process

description: The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, which occur in the absence of light. Bacteriochlorophylls are any of the chlorophylls of photosynthetic bacteria; they differ structurally from the chlorophylls of higher plants.


name: formaldehyde assimilation via xylulose monophosphate cycle

description: The pathway in which formaldehyde is used as a carbon source in the xylulose monophosphate cycle. Methylotrophic yeasts, but not bacteria, utilize the xylulose monophosphate cycle to fix formaldehyde and convert it into metabolically useful organic compounds.


name: chlorinated hydrocarbon metabolic process

description: The chemical reactions and pathways involving chlorinated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with chlorine atoms.


name: double-strand break repair via transcription-associated homologous recombination

description: A mechanism of homologous recombination and DNA repair in which transcript RNA is used as a template for DSB repair.


arteriole smooth muscle contraction

description: A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the arteriole. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The arteriole is the smallest division of the artery located between the muscular arteries and the capillaries.


name: positive regulation of pteridine metabolic process

description: Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.


description: Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + all-trans-decaprenyl diphosphate.


name: GDP-mannose biosynthetic process from glucose

description: The chemical reactions and pathways resulting in the formation of GDP-mannose from glucose.


category: biolink:Pathway biolink:OntologyClass biolink:BiologicalProcess biolink:Occurrent biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The series of molecular signals initiated by interleukin-17A binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


name: regulation of acetylcholine metabolic process

description: Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.


F-9775B metabolic process

description: The chemical reactions and pathways involving F-9775B.


UDP-galactosyltransferase activity

description: Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.


bromoxynil metabolic process

description: The chemical reactions and pathways involving bromoxynil, C7H3Br2NO, a dibrominated phenol derivative with a cyano (-CN) group attached. Bromoxynil is used as a herbicide for post-emergent control of annual broadleaf weeds and works by inhibiting photosynthesis in the target plants.


name: slow-twitch skeletal muscle fiber contraction

description: A process in which force is generated within slow-twitch skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The slow-twitch skeletal muscle is characterized by slow time parameters, low force development and resistance to fatigue.


orexin receptor activity

description: Combining with orexin to initiate a change in cell activity.


triterpenoid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of triterpenoid compounds, terpenoids with six isoprene units.


peptidyl-glutamine 2-methylation

description: The methylation of glutamine to form 2-methyl-L-glutamine.


name: protein N-linked glycosylation via arginine

description: The glycosylation of protein via peptidyl-arginine, omega-N-glycosyl-L-arginine.


name: isopentenyl adenine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of the cytokinin 6-isopentenyladenine.


N-acetylglucosamine metabolic process

description: The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.


membrane disassembly

description: The controlled breakdown of any cell membrane in the context of a normal process such as autophagy.


description: Catalysis of the reaction: (2E,6E,10E)-geranylgeranyl diphosphate + H+ + homogentisate = 6-geranylgeranyl-2-methylbenzene-1,4-diol + CO2 + diphosphate.


UGA codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes a UGA codon.


name: negative regulation of cell-cell adhesion mediated by cadherin

description: Any process that stops, prevents, or reduces the frequency, rate or extent of cell-cell adhesion mediated by cadherin.


name: mitochondrial tRNA threonylcarbamoyladenosine modification

description: The attachment of a carbonyl group and a threonine to the amino group of the adenine residue immediately 3' of the anticodon, in mitochondrial tRNAs that decode ANN codons (where N is any base).


codeine catabolic process

description: The chemical reactions and pathways resulting in the breakdown of codeine, an alkaloid found in the opium poppy, Papaver somniferum var. album. Codeine has analgesic, anti-tussive and anti-diarrhoeal properties.


cellular stress response to acidic pH

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in the homeostasis of organismal or cellular pH (with pH < 7). pH is a measure of the acidity or basicity of an aqueous solution.


xylulose 5-phosphate metabolic process

description: The chemical reactions and pathways involving xylulose 5-phosphate, a derivative of the ketopentose xylulose phosphorylated at the 5 carbon; it is an intermediate in the pentose phosphate pathway.


wax metabolic process

description: The chemical reactions and pathways involving wax, a compound containing C16 and C18 fatty acids.


candicidin biosynthetic process

description: The chemical reactions and pathways resulting in the formation of candicidin.


description: The chemical reactions and pathways resulting in the breakdown of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.


transport of virus

description: The directed movement of a virus, or part of a virus, into, out of, or within a host cell.


name: regulation of planar cell polarity pathway involved in neural tube closure

description: Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in neural tube closure.


fucose biosynthetic process

description: The chemical reactions and pathways resulting in the formation of fucose (6-deoxygalactose).


isoflavonoid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids.


name: negative regulation of trophoblast cell migration

description: Any process that stops, prevents or reduces the frequency, rate or extent of trophoblast cell migration.


tRNA C3-cytosine methylation

description: The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.


name: response to endoplasmic reticulum stress

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stress acting at the endoplasmic reticulum. ER stress usually results from the accumulation of unfolded or misfolded proteins in the ER lumen.


reverse transcription

description: A DNA synthesis process that uses RNA as the initial template for synthesis of DNA, but which also includes an RNase activity to remove the RNA strand of an RNA-DNA heteroduplex produced by the RNA-dependent synthesis step and use of the initial DNA strand as a template for DNA synthesis.


protein localization to medial cortex

description: A process in which a protein is transported to, or maintained in, the medial cortex.


L-leucine catabolic process

description: The chemical reactions and pathways resulting in the breakdown of L-leucine, 2-amino-4-methylpentanoic acid.


nitric oxide biosynthetic process

description: The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.


cellular extravasation

description: The migration of a leukocyte from the blood vessels into the surrounding tissue.


cholecystokinin receptor activity

description: Combining with cholecystokinin and transmitting the signal across the membrane by activating an associated G-protein to initiate a change in cell activity. Cholecystokinin can act as a neuropeptide or as a gastrointestinal hormone.


name: trans-synaptic signaling by endocannabinoid, modulating synaptic transmission

description: Cell-cell signaling between presynapse and postsynapse, via the release and reception of endocannabinoid ligands, that modulates the synaptic transmission properties of the synapse.


mandelate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.


regulation of oospore formation

description: Any process that modulates the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.


name: parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization

description: A positive regulation of the macromitophagy pathway that is triggered by mitochondrial depolarization and requires the function of a parkin-family molecule.


spermidine deacetylation

description: The modification of acetylspermadine by the removal of acetyl groups.


centromere complex assembly

description: The aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex. Includes the formation of the chromatin structures which form a platform for the kinetochore, and assembly of the kinetochore onto this specialized chromatin. In fission yeast and higher eukaryotes this process also includes the formation of heterochromatin at the outer repeat (pericentric) regions of the centromere.


butanediol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of butanediol; the biologically relevant isomer is 2,3-butanediol, CH3CH(OH)CH(OH)CH3.


name: positive regulation of activation of membrane attack complex

description: Any process that activates, maintains or increases the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.


name: regulation of alcohol biosynthetic process

description: Any process that modulates the frequency, rate or extent of alcohol biosynthetic process.


cellular response to absence of light

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.


neuronal signal transduction

description: The process in which an activated neuronal cell receptor conveys information down a signaling pathway, resulting in a change in the function or state of a cell. This process may be intracellular or intercellular.


N-acetylmannosamine metabolic process

description: The chemical reactions and pathways involving N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.


metanephros development

description: The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. In mammals, the metanephros is the excretory organ of the fetus, which develops into the mature kidney and is formed from the rear portion of the nephrogenic cord. The metanephros is an endocrine and metabolic organ that filters the blood and excretes the end products of body metabolism in the form of urine.


name: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)

description: Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the chloroplasts of vascular plants. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.


amino acid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.


pentalenolactone catabolic process

description: The chemical reactions and pathways resulting in the breakdown of pentalenolactone.


response to lectin

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.


name: regulation of T-helper 17 cell extravasation

description: Any process that modulates the frequency, rate or extent of T-helper 17 cell extravasation.


dethiobiotin metabolic process

description: The chemical reactions and pathways involving dethiobiotin, a derivative of biotin formed by replacing the sulfur atom by two hydrogen atoms.


name: positive regulation of G0 to G1 transition

description: A cell cycle process that activates or increases the rate or extent of the transition from the G0 quiescent state to the G1 phase.


negative regulation of growth

description: Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.


name: positive regulation of octopamine signaling pathway involved in response to food

description: Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway involved in response to food.


replication fork reversal

description: Replication fork processing that involves the unwinding of blocked forks to form four-stranded structures resembling Holliday junctions, which are subsequently resolved.


name: regulation of apoptotic process involved in outflow tract morphogenesis

description: Any process that modulates the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.


interneuron axon guidance

description: The process in which the migration of an axon growth cone of an interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. An interneuron is any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region, as contrasted with projection neurons which have axons projecting to other brain regions.


name: negative regulation of cobalamin metabolic process

description: Any process that stops, prevents or reduces the frequency, rate or extent of a cobalamin metabolic process.


viral translational shunt

description: A viral translation initiation mechanism where ribosomes are loaded onto viral mRNA at the 5'-cap structure and start scanning for a short distance before by-passing the large internal leader region and initiating at a downstream start site.


name: sugar transmembrane transporter activity

description: Enables the transfer of a sugar from one side of a membrane to the other. A sugar is any member of a class of sweet, water-soluble, crystallizable carbohydrates, which are the monosaccharides and smaller oligosaccharides.


name: negative regulation of MDA-5 signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate or extent of the series of the MDA-5 signaling pathway.


name: regulation of violaceol II biosynthetic process

description: Any process that modulates the frequency, rate or extent of violaceol II biosynthetic process.


name: envenomation resulting in modulation of transmission of nerve impulse in another organism

description: A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the transmission of nerve impulses in the bitten organism.


name: regulation of neutrophil mediated killing of symbiont cell

description: Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a symbiont cell, the directed killing of a symbiont target cell by a neutrophil.


receptor recycling

description: The process that results in the return of receptor molecules to an active state and an active cellular location after they have been stimulated by a ligand. An active state is when the receptor is ready to receive a signal.


name: positive regulation of mast cell activation involved in immune response

description: Any process that activates or increases the frequency, rate, or extent of mast cell activation as part of an immune response.


O-glycan processing, core 4

description: The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 4 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.


name: anaerobic 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane metabolic process

description: The chemical reactions and pathways involving 1,1,1-trichloro-2,2-bis-(4-chlorophenyl)ethane (DDT), a chlorinated, broad spectrum, contact insecticide, in the absence of oxygen.


octopine catabolic process to proline

description: The chemical reactions and pathways resulting in the breakdown of octopine into other compounds, including proline.


L-serine metabolic process

description: The chemical reactions and pathways involving L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.


RNA methylation

description: Posttranscriptional addition of a methyl group to either a nucleotide or 2'-O ribose in a polyribonucleotide. Usually uses S-adenosylmethionine as a cofactor.


androgen metabolic process

description: The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.


neural plate regionalization

description: The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.


acquisition of nutrients from host

description: The process that begins with the production and formation of structures and molecules in an organism that are required for the acquisition and utilization of nutrients from its host organism, and the ends with the acquirement of the nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.


intronic snoRNA processing

description: The biogenesis of a snoRNA molecule which resides within, and is processed from, the intron of a pre-mRNA.


glucosamine metabolic process

description: The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.


name: non-phosphorylated glucose catabolic process

description: The chemical reactions and pathways resulting in the breakdown of non-phosphorylated forms of glucose.


seed trichome differentiation

description: The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function.


regulatory ncRNA processing

description: A process leading to the generation of a functional regulatory non-coding RNA.


name: mesodermal to mesenchymal transition involved in gastrulation

description: The epithelial to mesenchymal transition process in which a mesodermal cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell as part of the process of gastrulation.


glycyrrhetinate metabolic process

description: The chemical reactions and pathways involving glycyrrhetinate.


name: presynaptic actin cytoskeleton organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton.


conidiogenone biosynthetic process

description: The chemical reactions and pathways resulting in the formation of conidiogenone , a diterpene known to induce the conidiation.


mitochondrial protein processing

description: The peptide cleavage of mitochondrial proteins, including cleavage contributing to their import.


name: regulation of galactoglucomannan catabolic process

description: Any process that modulates the frequency, rate or extent of galactoglucomannan catabolic process.


name: fructose:proton symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose + H+ = fructose + H+.


name: fatty acid primary amide catabolic process

description: The chemical reactions and pathways resulting in the breakdown of primary fatty amides.


histone dopaminyltransferase activity

description: Catalysis of the reaction: dopamine + L-glutaminyl-[histone] = 5-dopaminyl-L-glutamyl-[histone] + NH4(+).


name: regulation of toll-like receptor 11 signaling pathway

description: Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.


name: peptidyl-cysteine modification to S-amindino-L-cysteine

description: The amidinylation of peptidyl-cysteine to form peptidyl-S-amidino-L-cysteine.


name: cellular response to reactive oxygen species

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.


amine metabolic process

description: The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.


protein localization to lysosome

description: A process in which a protein is transported to, or maintained in, a location within a lysosome.


name: negative regulation of mitotic cytokinesis

description: Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinesis.


UAA codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes a UAA codon.


name: positive regulation of cell migration by vascular endothelial growth factor signaling pathway

description: The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to its receptor on the surface of a cell, which activates or increases the frequency, rate or extent of the orderly movement of a cell from one site to another.


tetrahydrofolate interconversion

description: The chemical reactions and pathways by which one-carbon (C1) units are transferred between tetrahydrofolate molecules, to synthesise other tetrahydrofolate molecules.


name: positive regulation of thyroid hormone mediated signaling pathway

description: Any process that increases the frequency, rate or extent of thyroid hormone mediated signaling pathway.


pattern specification process

description: Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.


dehydroaustinol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of dehydroaustinol.


aldaric acid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.


dGMP salvage

description: Any process which produces a dGMP from derivatives of it, without de novo synthesis.


microtubule-based process

description: Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.


pullulan catabolic process

description: The chemical reactions and pathways resulting in the breakdown of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.


name: positive regulation of cytokinesis, site selection

description: Any process that activates or increases the frequency, rate or extent of site selection that occurs as part of cytokinesis.


name: L-methionine biosynthetic process from homoserine via O-acetyl-L-homoserine and cystathionine

description: The chemical reactions and pathways resulting in the formation of methionine from other compounds, including homoserine, via the intermediates O-acetyl-L-homoserine and cystathionine.


chloroplast fission

description: The division of a chloroplast within a cell to form two or more separate chloroplast compartments. This division occurs independently of mitosis.


lactam catabolic process

description: The chemical reactions and pathways resulting in the breakdown of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.


CD80 biosynthetic process

description: The chemical reactions and pathways resulting in the formation of CD80, a CD marker that occurs on antigen presenting cells such as activated B cells and monocytes that provides a co-stimulatory signal necessary for T cell activation and survival.


Lewis x epitope biosynthetic process

description: The chemical reactions and pathways resulting in the formation of a Lewis x epitope, a trisaccharide (beta-D-galactosyl-(1,4)-[alpha-L-fucosyl-(1,3)]-N-acetyl-beta-D-glucosamine) expressed on several glycolipids, glycoproteins, and proteoglycans of the nervous system. The related Lewis x epitope is formed by alpha(1,3) fucosylation of the N-acetylglucosaminyl residue of a type 2 histo-blood group antigen precursor disaccharide.


regionalization

description: The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.


name: positive regulation of cholangiocyte apoptotic process

description: Any process that activates or increases the frequency, rate or extent of cholangiocyte apoptotic process.


name: cellular response to amino acid stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.


name: cell wall modification involved in fruit ripening

description: The series of events resulting in chemical or structural alterations of existing cell walls that contribute to fruit ripening.


name: positive regulation of acute inflammatory response to antigenic stimulus

description: Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.


organophosphate metabolic process

description: The chemical reactions and pathways involving organophosphates, any phosphate-containing organic compound.


name: negative regulation of neuroblast migration

description: Any process that stops, prevents, or reduces the frequency, rate or extent of neuroblast migration.


name: negative regulation of retinoic acid receptor signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity.


name: chromosomal 5-methylcytosine DNA demethylation pathway

description: A process that chemically modifies 5-methylcytosine (5meC) to make it a substrate for the base excision repair pathway, which then restores the unmodified cytosine.


islet amyloid polypeptide processing

description: The formation of mature islet amyloid polypeptide (IAPP) by posttranslational processing of pro-islet amyloid polypeptide (pro-IAPP).


monosaccharide catabolic process

description: The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.


aerobic glycerol catabolic process

description: The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, in the presence of oxygen.


name: negative regulation of neutrophil apoptotic process

description: Any process that stops, prevents, or reduces the frequency, rate, or extent of neutrophil apoptotic process.


pigment metabolic process

description: The chemical reactions and pathways involving pigment, any general or particular coloring matter in living organisms, e.g. melanin.


cadinene catabolic process

description: The chemical reactions and pathways resulting in the breakdown of cadinene.


name: regulation of melanotic encapsulation of foreign target

description: Any process that modulates the frequency, rate or extent of melanotic encapsulation of foreign target.


mitochondrial DNA replication

description: The process in which new strands of DNA are synthesized in the mitochondrion.


name: chemokine (C-C motif) ligand 6 production

description: The appearance of chemokine (C-C motif) ligand 6 (CCL6) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: symbiont-mediated activation of host apoptosis

description: A process in which a symbiont gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.


octanol catabolic process

description: The chemical reactions and pathways resulting in the breakdown of octanol, the 8-carbon alcohol with the formula C8H17OH.


name: regulation of floral organ abscission by signal transduction

description: The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately modulating the rate, or extent of floral organ abscission.


asperthecin biosynthetic process

description: The chemical reactions and pathways resulting in the formation of asperthecin, an anthraquinone pigment obtained from the mould Aspergillus nidulans.


cellular response to miconazole

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a miconazole stimulus.


trimethylenediamine catabolic process

description: The chemical reactions and pathways resulting in the breakdown of trimethylenediamine.


serotonin biosynthetic process

description: The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.


orotic acid metabolic process

description: The chemical reactions and pathways involving orotic acid.


name: GPI anchor biosynthetic process via N-cysteinyl-glycosylphosphatidylinositolethanolamine

description: The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-cysteine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a cysteinyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.


plastid DNA replication

description: The process in which new strands of DNA are synthesized in a plastid.


L-lyxose metabolic process

description: The chemical reactions and pathways involving L-lyxose, the L-enantiomer of aldopentose lyxo-pentose, the C-2 epimer of xylose.


lens fiber cell apoptotic process

description: Any apoptotic process in a lens fiber cell. Lens fiber cells are elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.


name: protoporphyrinogen IX biosynthetic process from glycine

description: The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX from other compounds, including glycine.


mannogen catabolic process

description: The chemical reactions and pathways resulting in the breakdown of mannogen, a mannose-containing polysaccharide that is a major energy reserve in Leishmania.


regulation of mismatch repair

description: Any process that modulates the frequency, rate or extent of mismatch repair.


name: symbiont-mediated perturbation of host phagocytosis

description: A process in which in a symbiont interferes with or inhibits host phagocytosis by targeting phagocytic signaling or the cellular phagocytic machinery. The host is defined as the larger of the organisms involved in a symbiotic interaction.


sperm aster formation

description: Formation and organization of an aster composed of microtubule arrays originating from the sperm basal body and extending virtually to the egg periphery. The sperm aster ensures the appropriate positioning of the male and female pronuclei.


name: terpenoid indole alkaloid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of terpenoid indole alkaloids, compounds formed from the condensation of tryptamine (derived from tryptophan) and secologanin (derived from geranyl pyrophosphate).


GPI anchor release

description: The GPI anchor metabolic process that results in enzymatic cleavage of the anchor, releasing an anchored protein from the membrane.


name: regulation of pattern recognition receptor signaling pathway

description: Any process that modulates the rate, frequency or extent of a pattern recognition receptor signaling pathway.


dendritic cell chemotaxis

description: The movement of a dendritic cell in response to an external stimulus.


name: regulation of activated CD4-positive, alpha-beta T cell apoptotic process

description: Any process that modulates the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.


name: lipoprotein biosynthetic process via N-acyl transfer

description: The chemical reactions and pathways by which N-acyl transfer leads to formation of a water-soluble protein-lipid complex.


protein localization to outer membrane

description: A process in which a protein is transported to, or maintained in, a specific location the cell outer membrane.


name: positive regulation by virus of host cell division

description: Any process where an infecting virus activates or increases the frequency, rate or extent of its host's cell division.


pentitol phosphate metabolic process

description: The chemical reactions and pathways involving pentitol phosphates, any phosphorylated alditol with a chain of five carbon atoms in the molecule.


tolerance induction in Peyer's patch

description: Tolerance induction taking place in the Peyer's patches.


name: protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan

description: The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring.


name: cap-independent translational initiation of circular RNA

description: The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate circRNA translation.


name: positive regulation of neutrophil mediated killing of gram-positive bacterium

description: Any process that increases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.


name: iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide

description: The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide.


D-arabitol catabolic process

description: The chemical reactions and pathways resulting in the breakdown of D-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group. The D enantiomer is present in lichens and mushrooms.


regulation of microglial cell migration

description: Any process that modulates the frequency, rate or extent of microglial cell migration.


nucleosome organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.


protein O-linked mannosylation

description: The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage.


protein K33-linked ubiquitination

description: A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 33 of the ubiquitin monomers, is added to a protein.


name: sequestering of TGFbeta in extracellular matrix

description: Confining TGFbeta to the extracellular matrix (ECM) such that it is separated from other components of the signaling pathway, including its cell surface receptor. TGFbeta is secreted as part of a latent complex that is targeted to the extracellular matrix through latent-TGFbeta-binding protein (LTBP)-mediated association with matrix proteins.


RNA-templated viral transcription

description: A transcription process that uses viral RNA as a template.


cellular response to dithiothreitol

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dithiothreitol stimulus.


name: positive regulation of signal transduction by p53 class mediator

description: Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator.


name: trans-synaptic signaling by nitric oxide, modulating synaptic transmission

description: Cell-cell signaling between presynapse and postsynapse, via the release and reception of nitric oxide molecules, that modulates the synaptic transmission properties of the synapse.


name: cell wall macromolecule catabolic process involved in cell wall disassembly

description: The chemical reactions and pathways that result in the breakdown of macromolecules that form part of a cell wall, and contributes to the breakdown of the cell wall.


name: negative regulation of inflammasome-mediated signaling pathway

description: Any process that stops, prevents or reduces the frequency, rate or extent of an inflammasome-mediated signaling pathway.


TORC1 signaling

description: A series of intracellular molecular signals mediated by TORC1; TOR (target of rapamycin) in complex with at least Raptor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.


name: protein localization to mating projection tip

description: A process in which a protein is transported to, or maintained in, a location within a mating projection tip.


cellular response to unfolded protein

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus.


synaptic transmission, noradrenergic

description: The vesicular release of noradrenaline (norepinephrine) a presynapse, across a chemical synapse, the subsequent activation of noradrenaline receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.


autophagosome organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an autophagosome.


dendritic cell migration

description: The movement of a dendritic cell within or between different tissues and organs of the body.


name: regulation of syringal lignin catabolic process

description: Any process that modulates the frequency, rate or extent of syringal lignin catabolic process.


name: guanosine pentaphosphate metabolic process

description: The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.


lipoxin metabolic process

description: The chemical reactions and pathways involving a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.


plastid rRNA transcription

description: The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase.


description: Catalysis of the reaction: S-adenosyl-L-methionine + protein L-glutamate = S-adenosyl-L-homocysteine + protein L-glutamate 5-methyl ester; this reaction is the methylation of peptidyl-L-glutamate to form peptidyl-L-glutamate 5-methyl ester.


name: cellular response to differentiation-inducing factor 2

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)pentan-1-one stimulus.


AGU codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes an AGU codon.


name: choline biosynthetic process via phosphoryl-ethanolamine

description: The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate phosphoryl-ethanolamine.


alpha-glucan catabolic process

description: The chemical reactions and pathways resulting in the breakdown of alpha-glucans.


phosphagen biosynthetic process

description: The chemical reactions and pathways resulting in the formation of phosphagen, any of a group of guanidine phosphates that occur in muscle and can be used to regenerate ATP from ADP during muscular contraction.


cortical cytoskeleton organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.


hydro-lyase activity

description: Catalysis of the cleavage of a carbon-oxygen bond by elimination of water.


chlorophyll a biosynthetic process

description: The chemical reactions and pathways leading to the formation of chlorophyll a.


modulation of nutrient release by host

description: Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.


apical junction assembly

description: The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents.


T cell inhibitory signaling pathway

description: The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a T cell capable of inhibiting an immune effector process contributing to an immune response.


sulfide oxidation

description: The chemical reactions and pathways resulting in the conversion of sulfide to elemental sulfur in a higher oxidation state, or to sulfite or sulfate.


signaling receptor activity

description: Receiving a signal and transmitting it in the cell to initiate a change in cell activity. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.


ecdysteroid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.


tRNA 5'-end processing

description: The process in which the 5' end of a pre-tRNA molecule is converted to that of a mature tRNA.


name: hexaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) activity

description: Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 3 isopentenyl diphosphate = 3 diphosphate + all-trans-hexaprenyl diphosphate.


cellular response to fluoxetine

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoxetine stimulus. Fluoxetine increases the extracellular level of the neurotransmitter serotonin by inhibiting its reuptake into the presynaptic cell, increasing the level of serotonin available to bind to the postsynaptic receptor.


name: ceramide phosphoethanolamine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of ceramide phosphoethanolamine.


arabinose catabolic process

description: The chemical reactions and pathways resulting in the breakdown of arabinose, arabino-pentose.


novobiocin biosynthetic process

description: The chemical reactions and pathways resulting in the formation of novobiocin, a coumarin antibiotic produced by the bacterium Gyrasestreptomyces spheroides, that acts by inhibiting DNA gyrase.


name: positive regulation of mitotic sister chromatid separation

description: Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid separation.


4-chlorobiphenyl metabolic process

description: The chemical reactions and pathways involving 4-chlorobiphenyl, a member of the polychlorinated biphenyl (PCB) group of compounds, a very stable group of synthetic organic compounds composed of a biphenyl nucleus with 1-10 chlorine substituents. 4-chlorobiphenyl has been used as a model substrate to investigate PCB degradation.


name: negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway

description: Any process that stops, prevents or reduces the frequency, rate or extent of a hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway.


name: cellular response to thyrotropin-releasing hormone

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyrotropin-releasing hormone (TRH) stimulus. TRH increases the secretion of thyroid-stimulating hormone by the anterior pituitary.


alpha2-adrenergic receptor activity

description: Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of alpha2-adrenergic receptors; the activity involves transmitting the signal to the Gi alpha subunit of a heterotrimeric G protein.


name: G protein-coupled bile acid receptor activity

description: Combining with an extracellular bile acid and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.


name: negative regulation of activated T cell autonomous cell death

description: Any process that stops, prevents, or reduces the frequency, rate or extent of activated T cell autonomous cell death.


name: inhibitory chemical synaptic transmission

description: Synaptic transmission that results in an inhibitory postsynaptic potential.


GDP-D-rhamnose biosynthetic process

description: The chemical reactions and pathways resulting in the formation of GDP-D-rhamnose, a substance composed of rhamnose in glycosidic linkage with guanosine diphosphate.


Golgi vesicle fusion to target membrane

description: The joining of the lipid bilayer membrane around a Golgi transport vesicle to the target lipid bilayer membrane.


name: establishment of protein localization to juxtaparanode region of axon

description: The directed movement of a protein to the juxtaparanode region of an axon.


name: iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide

description: The incorporation of iron into a 8Fe-7S iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide, found in nitrogenase.


hormone-mediated signaling pathway

description: The series of molecular signals mediated by the detection of a hormone.


name: negative regulation of endothelial cell chemotaxis

description: Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell chemotaxis.


viral extrusion

description: The process whereby a filamentous phage particle is released from a bacterial host cell via a concerted mechanism of assembly and secretion. Neosynthesized virions are coordinately exported as they are assembled at the cell surface in a secretory process that leaves the host cell fully viable. Non-capsid proteins form structures that facilitate translocation through the inner membrane and outer membranes. A viral single-stranded DNA binding protein coats progeny viral DNA molecules to generate the intracellular precursor for assembly of phage particles as they are extruded through the membranes of the bacterial host. The structural proteins of the virus are anchored in the inner membrane before their incorporation into the phage particle. As assembly proceeds, the phage genome traverses the inner and outer membranes until the entire DNA molecule has been coated and extruded.


cellular response to manganese ion

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.


name: regulation of hematopoietic stem cell migration

description: Any process that modulates the frequency, rate or extent of hematopoietic stem cell migration.


name: geranylgeranyl diphosphate metabolic process

description: The chemical reactions and pathways involving geranylgeranyl diphosphate, a polyprenol compound involved in the biosynthesis of a variety of terpenoids including chlorophylls, carotenoids, tocopherols, plastoquinones, and the plant hormones gibberellins.


D-ribose catabolic process

description: The chemical reactions and pathways resulting in the breakdown of D-ribose (ribo-pentose).


natural killer cell chemotaxis

description: The directed movement of a natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).


name: propanediol transmembrane transporter activity

description: Enables the transfer of propanediol from one side of a membrane to the other. Propanediol is a sweet colorless, viscous, hygroscopic liquid used as an antifreeze and in brake fluid; it is also as a humectant in cosmetics and personal care items, although it can be absorbed through the skin with harmful effects.


name: negative regulation of acid-sensing ion channel in another organism

description: Any process in which an organism negatively regulates the activity of a voltage-gated sodium channel in another organism.


name: cellular response to prostaglandin D stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin D stimulus.


protein localization to cilium

description: A process in which a protein is transported to, or maintained in, a location within a cilium.


blasticidin S metabolic process

description: The chemical reactions and pathways involving blasticidin S.


neuron apoptotic process

description: Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.


monoterpenoid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of monoterpenoid compounds, terpenoids having a C10 skeleton.


name: cellular response to phosphatidylethanolamine

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phosphatidylethanolamine stimulus.


cell wall pectin metabolic process

description: The chemical reactions and pathways involving pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.


name: symbiont-mediated perturbation of host cell cycle progression

description: A process in which a symbiont interferes with the normal progression through the host cell cycle. The host is defined as the larger of the organisms involved in a symbiotic interaction.


mitochondrial mRNA processing

description: Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs.


name: positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage

description: Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage.


name: regulation of metanephric mesenchymal cell migration

description: Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.


IgM receptor activity

description: Combining with an immunoglobulin of the IgM isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


mitotic DNA replication termination

description: Any DNA replication termination involved in mitotic cell cycle DNA replication.


name: branched-chain amino acid metabolic process

description: The chemical reactions and pathways involving amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.


hydroperoxide metabolic process

description: The chemical reactions and pathways involving a hydroperoxide.


name: positive regulation of interleukin-6-mediated signaling pathway

description: Any process that increases the rate, frequency or extent of an interleukin-6-mediated signaling pathway.


name: aerobic respiration, using carbon monoxide as electron donor

description: The metabolic process in which carbon monoxide (CO) is oxidized to carbon dioxide (CO2) to generate energy. Conservation of energy in this process likely uses sodium ion gradients for ATP synthesis and is coupled to quantitative sulfide methylation.


name: epidermal growth factor receptor signaling pathway involved in lung development

description: The series of molecular signals generated as a consequence of an epidermal growth factor-type receptor binding to one of its physiological ligands. This process contributes to lung development.


tetrachloroethylene metabolic process

description: The chemical reactions and pathways involving tetrachloroethylene (tetrachloroethene), a derivative of ethene with the hydrogen atoms replaced by chlorines. Tetrachloroethene has been used primarily as a solvent in dry-cleaning industries and to a lesser extent as a degreasing solvent.


name: modulation of apoptotic process in another organism

description: A process in which an organism modulates the frequency, rate or extent of apoptosis in a second organism.


G protein-coupled ATP receptor activity

description: Combining with ATP and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.


name: chemokine (C-X-C motif) ligand 12 production

description: The appearance of chemokine (C-X-C motif) ligand 12 (CXCL12) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


UCA codon-amino acid adaptor activity

description: A triplet codon-amino acid adaptor activity that recognizes a UCA codon.


name: motogenic signaling involved in postnatal olfactory bulb interneuron migration

description: The signaling that results in the stimulation of cell movement in the rostral migratory stream.


aspartate N-acetyltransferase activity

description: Catalysis of the reaction: L-aspartate + acetyl-CoA = N-acetyl-L-aspartate + CoA + H+.


acetoin metabolic process

description: The chemical reactions and pathways involving acetoin, 3-hydroxy-2-butanone, often as part of a fermentation pathway or for use as a carbon source.


name: endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)

description: Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.


snRNA 2'-O-methylation

description: The posttranscriptional addition of a methyl group to the 2' oxygen atom of a nucleotide residue in an snRNA molecule.


alpha-copaene catabolic process

description: The chemical reactions and pathways resulting in the breakdown of alpha-copaene.


response to cadmium ion

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.


kynurenic acid metabolic process

description: The chemical reactions and pathways involving kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.


name: L-xylitol catabolic process to xylulose 5-phosphate

description: The chemical reactions and pathways resulting in the breakdown of L-xylitol to form xylulose 5-phosphate. L-xylitol is converted into L-xylulose, which is then phosphorylated to L-xylulose-5-phosphate. This is converted to D-xylulose-5-phosphate via the intermediate L-ribulose-5-phosphate.


spectrosome organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spectrosome, a germline specific spherical organelle that is the precursor to the fusome.


calcium-dependent self proteolysis

description: The calcium-dependent hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.


name: negative regulation of toll-like receptor 12 signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 12 signaling pathway.


description: The chemical reactions and pathways resulting in the breakdown of 7,8-didemethyl-8-hydroxy-5-deazariboflavin.


protein localization to centrosome

description: A process in which a protein is transported to, or maintained at, the centrosome.


description: Catalysis of the reaction: ADP-ribose + H2O = AMP + ribose-1-phosphate.


name: L-methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine

description: The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.


name: regulation of nucleobase-containing compound metabolic process

description: Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.


C-C motif chemokine 2 receptor activity

description: Combining with the C-C motif chemokine 2 (CCL2) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


glucosylglycerol biosynthetic process

description: The chemical reactions and pathways resulting in the formation of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.


name: 2,5-dihydroxypyridine catabolic process to fumarate

description: The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine to form fumarate. 2,5-dihydroxypyridine is dioxygenated to give maleamate and formate; the maleamate from this reaction is then converted to maleate, which is then isomerized to fumurate.


name: mesodermal-endodermal cell signaling involved in heart induction

description: Any process that mediates the transfer of information from mesodermal cells to endodermal cells that contributes to heart induction.


arginine catabolic process to ornithine

description: The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.


name: cellular response to arsenic-containing substance

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.


stress response to nickel ion

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a nickel ion stimulus.


dihydrofolate metabolic process

description: The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.


name: cellular modified histidine metabolic process

description: The chemical reactions and pathways involving compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.


name: regulation of ARF protein signal transduction

description: Any process that modulates the frequency, rate or extent of ARF protein signal transduction.


name: negative regulation of non-canonical NF-kappaB signal transduction

description: Any process that stops, prevents or reduces the frequency, rate or extent of non-canonical NF-kappaB signaling cascade.


phosphatidylglycerol metabolic process

description: The chemical reactions and pathways involving phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol. They are important constituents of cell membranes.


chloroplast relocation

description: The process in which chloroplasts in photosynthetic cells migrate toward illuminated sites to optimize photosynthesis and move away from excessively illuminated areas to protect the photosynthetic machinery.


cellular response to chromate

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chromate stimulus.


name: hepatocyte growth factor receptor activity

description: Combining with hepatocyte growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.


monodictyphenone biosynthetic process

description: The chemical reactions and pathways resulting in the formation of monodictyphenone.


name: Wnt signaling pathway involved in somitogenesis

description: The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.


microtubule anchoring

description: Any process in which a microtubule is maintained in a specific location in a cell.


name: microtubule cytoskeleton organization involved in establishment of planar polarity

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.


N-acylmannosamine kinase activity

description: Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate.


name: modulation by host of viral catalytic activity

description: The process in which a host organism effects a change in the enzyme activity of a virus with which it is infected.


in utero embryonic development

description: The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.


name: regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator

description: Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.


plastid inheritance

description: The partitioning of plastids between daughter cells at cell division.


methylmercury catabolic process

description: The chemical reactions and pathways resulting in the breakdown of methylmercury (MeHg+), a highly toxic organometal.


name: symbiont-mediated suppression of host RIG-I signaling pathway

description: A process in which a symbiont interferes with, inhibits or disrupts a RIG-I signaling pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.


regulation of tRNA catabolic process

description: Any process that modulates the frequency, rate or extent of tRNA catabolic process.


synaptic signaling by nitric oxide

description: Cell-cell signaling to or from a synapse, mediated by nitric oxide.


name: negative regulation of G2/MI transition of meiotic cell cycle

description: Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to MI phase of the meiotic cell cycle.


name: positive regulation of FtsZ-dependent cytokinesis

description: Any process that activates or increases the frequency, rate or extent of Ftsz-dependent cytokinesis.


U6 snRNA 3'-end binding

description: Binding to a U6 small nuclear RNA (U6 snRNA) at the 3' end.


description: Catalysis of the transfer of a glucosyl group from UDP-glucose to the 3'-hydroxy group of a quercetin molecule.


progesterone metabolic process

description: The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.


symbiotic process benefiting host

description: A process carried out by symbiont gene products that enables a symbiotic interaction with a host organism, that is beneficial to the host organism.


name: 2-dehydro-3-deoxy-D-gluconic acid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of 2-dehydro-3-deoxy-D-gluconic acid.


cellular response to leptin stimulus

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptin stimulus. Leptin is a hormone manufactured primarily in the adipocytes of white adipose tissue, and the level of circulating leptin is directly proportional to the total amount of fat in the body. It plays a key role in regulating energy intake and energy expenditure, including appetite and metabolism.


name: positive regulation of red or far-red light signaling pathway

description: Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.


name: striated muscle myosin thick filament assembly

description: The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in striated muscle.


name: regulation of leukocyte tethering or rolling

description: Any process that modulates the frequency, rate or extent of leukocyte tethering or rolling.


syringal lignin metabolic process

description: The chemical reactions and pathways involving syringal lignin.


name: chloride:monoatomic cation symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in).


trans-translation

description: A translational elongation process in which transfer of a translating ribosome from one mRNA to another RNA template takes place. Trans-translation occurs during tmRNA release of stalled ribosomes.


ochratoxin A catabolic process

description: The chemical reactions and pathways resulting in the breakdown of ochratoxin A.


name: negative regulation of xylose catabolic process to ethanol

description: Any process that stops, prevents or reduces the frequency, rate or extent of xylose catabolic process to ethanol.


mineralocorticoid catabolic process

description: The chemical reactions and pathways resulting in the breakdown of mineralocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.


description: Catalysis of the reaction: UDP-galactose + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-1,4-beta-D-glucosyl-N-acylsphingosine = UDP + D-galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine.


cspyrone B1 catabolic process

description: The chemical reactions and pathways resulting in the breakdown of cspyrone B1.


cyanophycin metabolic process

description: The chemical reactions and pathways involving cyanophycin, a non-protein, non-ribosomally produced amino acid polymer composed of an aspartic acid backbone and arginine side groups.


acetyl-CoA assimilation pathway

description: The pathways by which acetyl-CoA is processed and converted into alpha-ketoglutarate (2-oxoglutarate); methanogenic archaea use these pathways to assimilate acetyl-CoA into the cell.


cellular response to benzoic acid

description: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.


name: nickel incorporation into metallo-sulfur cluster

description: The incorporation of nickel into a metallo-sulfur cluster.


description: The chemical reactions and pathways involving (17Z)-protosta-17(20),24-dien-3beta-ol.


(-)-microperfuranone catabolic process

description: The chemical reactions and pathways resulting in the breakdown of (-)-microperfuranone.


description: Catalysis of the reaction: UDP-glucose + isoflavone = UDP + isoflavone 7-O-beta-D-glucoside.


response to endogenous stimulus

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.


name: regulation of intrinsic apoptotic signaling pathway

description: Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway.


name: peptidyl-cysteine modification to L-cysteine persulfide

description: The modification of peptidyl-cysteine to form peptidyl-L-cysteine persulfide.


name: macropinosomal membrane permeabilization involved in viral entry into host cell

description: Induction of macropinosome membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with the capsid. Occurs after internalization of the virus in a macropinosome, and results in release of the viral contents from the macropinosome into the host cell cytoplasm.


pentachlorophenol metabolic process

description: The chemical reactions and pathways involving pentachlorophenol, a chlorinated insecticide and fungicide used primarily to protect timber from fungal rot and wood boring insects. Pentachlorophenol is significantly toxic to mammals, plants, and many microorganisms.


description: The chemical reactions and pathways resulting in the formation of CMP-N-acetylneuraminate, a substance composed of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid in glycosidic linkage with cytidine monophosphate.


description: The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydromethanopterin.


name: negative regulation of cell cycle G1/S phase transition

description: Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the cell cycle.


name: fumarate transmembrane transporter activity

description: Enables the transfer of fumarate from one side of a membrane to the other. Fumarate is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.


purinergic nucleotide receptor activity

description: Combining with a purine nucleotide and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.


name: negative regulation of toll-like receptor 8 signaling pathway

description: Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 8 signaling pathway.


name: positive regulation of microglial cell migration

description: Any process that activates or increases the frequency, rate or extent of microglial cell migration.


extracellular exosome assembly

description: The aggregation, arrangement and bonding together of a set of components to form an extracellular vesicular exosome, a membrane-bounded vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Exosomes are defined by their size, which generally ranges from 30 nm to 100 nm.


misfolded RNA binding

description: Binding to an RNA molecule that has assumed an incorrect conformation.


stilbene metabolic process

description: The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.


glucan catabolic process

description: The chemical reactions and pathways resulting in the breakdown of glucans, polysaccharides consisting only of glucose residues.


name: defense response by cell wall thickening

description: A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.


endothelin production

description: The appearance of a endothelin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Endothelins are endothelium-derived vasoactive peptides involved in a variety of biological functions.


name: intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator

description: The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of osmotic stress, and ends when the execution phase of apoptosis is triggered.


description: Catalysis of the transfer of a methyl group to the carbon atom of an arginine residue in a protein. This modification has been detected in anaerobic bacteria.


nor-spermidine metabolic process

description: The chemical reactions and pathways involving nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.


regulation of ascospore formation

description: Any process that modulates the frequency, rate or extent of ascospore formation. An example of this process is found in Saccharomyces cerevisiae.


name: lys-arg specific dibasic protein processing

description: Any protein processing achieved by the cleavage of a peptide bond after a lysine-arginine amino acid residue combination within a protein.


name: positive regulation of anthocyanin biosynthetic process

description: Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.


name: positive regulation of cAMP/PKA signal transduction

description: Any process that activates or increases the frequency, rate or extent of cAMP/PKA signal transduction.


cell cycle phase

description: One of the distinct periods or stages into which the cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.


peptide antibiotic biosynthetic process

description: The chemical reactions and pathways resulting in the formation of peptides with antibiotic activity.


name: positive regulation of smooth muscle cell apoptotic process

description: Any process that activates or increases the frequency, rate, or extent of smooth muscle cell apoptotic process.


arugosin catabolic process

description: The chemical reactions and pathways resulting in the breakdown of arugosin.


CD24 biosynthetic process

description: The chemical reactions and pathways resulting in the formation of CD24, a CD marker and cell adhesion molecule that occurs on many B-lineage cells and mature granulocytes, and is involved in B cell activation and differentiation as well as T cell co-stimulation.


name: peptide:proton symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: peptide(out) + H+(out) = peptide(in) + H+(in), up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by hydrogen ion movement.


name: branchiomotor neuron axon guidance in branchial arch mesenchyme

description: The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.


positive regulation of cellular process

description: Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.


adrenomedullin receptor activity

description: Combining with adrenomedullin to initiate a change in cell activity.


name: positive regulation of nitric oxide biosynthetic process

description: Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.