An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#21.


A nucleoside monophosphate analogue that is dAMP in which one of the exocyclic amino hydrogens is replaced by a carbamoylmethyl group.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (16Z,19Z,22Z,25Z,28Z,31Z)-3-oxotetratriacontahexaenoic acid.


Monoanion of UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine arising from deprotonation of the diphosphate and protonation of the amino function; major species at pH 7.3.


phospho-alpha-glucan

An alpha-glucan having a phosphate group in an unspecified position.


A 3-oxoacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 6-oxocyclohex-1-ene-1-carboxylic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (14Z,17Z,20Z,23Z,26Z)-dotriacontapentaenoic acid.


A 3-hydroxydocosanoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3S)-hydroxydocosanoic acid.


A mannosylated ceramide phosphoinositol compound having a tetracosanoyl group attached to the ceramide nitrogen, with no hydroxylation at C-4 of the long-chain base or on the very-long-chain fatty acid.


An S-acyl-4'-phosphopantetheine obtained by formal condensation of the thiol group of D-pantetheine 4'-phosphate with the carboxy group of 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oic acid.


CARBOVIR TRIPHOSPHATE

The organic triphosphate that is the 5'-triphosphate of (-)-carbovir.


inorganic phosphate salt

A phosphate salt that lacks C-H bonds


A 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA in which the carbon at position 25 of the steroidal side chain has R configuration.


A xylose phosphate that is 3-O-(6-O-phosphono-alpha-D-mannopyranosyl)-alpha-D-mannopyranose in which the dihydrogen phosphate group is condensed with the anomeric hydroxy group of alpha-D-xylose.


2-phospholactic acid

The phosphoric acid monoester resulting from formal condensation of the alcohol group of lactic acid with phosphoric acid.


dTDP-beta-L-rhamnose

The beta-anomer of dTDP-L-rhamnose.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-(4-hydroxy-3-methoxyphenyl)-3-oxopropanoic acid (vanilloylacetic acid). It is a potential intermediate in vanillate synthesis.


UDP-galactose

A UDP-D-galactose in which the anomeric centre of the galactose moiety has alpha-configuration.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3E,5Z,8Z,11Z,14Z)-icosapentaenoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (15Z,18Z,21Z,24Z,27Z)-3-oxotriacontapentaenoic acid.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of 4-hydroxybutyric acid.


An inositol phosphomannosylinositol phosphoceramide compound having an inositol 1-phosphoryl group linked to the mannose residue and a tetracosanoyl group amide-linked to a C20 sphinganine base, with no hydroxylation at C-4 of the long-chain base or on the C24 very-long-chain fatty acid.


name: E. coli strain O157 LPS core oligosaccharide R1

description: A branched ten-membered oligosaccharide phosphate consisting of two galactose residues, three glucose residues, one 4-phospho-D-glycero-alpha-D-manno-heptose residue, one L-glycero-alpha-D-manno-heptose residue, one 4-phospho-L-glycero-alpha-D-manno-heptose residue and two Kdo residues, one of which is at the reducing end. The unit constitutes one of the core oligosaccharide structures of enterobacterial lipopolysaccharide obtained from E. coli strain O157.


N(6)-(pyridoxal phosphate)-L-lysine

An L-lysine derivative that is the aldimine obtained via formal condensation of the side-chain amino group of L-lysine with the carbonyl group of pyridoxal phosphate.


UDP-N-acetyl-alpha-D-mannosamine

A UDP-N-acetyl-D-mannosamine in which the anomeric centre of the pyranose fragment has alpha-configuration.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of (2S)-methylsuccinic acid.


A sphingoid 1-phosphate that is sphingadienine substituted by a phospho group at position 1.


name: O,O-Diethyl thiophosphate (potassium salt)


D-glucosamine 6-phosphate

A glucosamine phosphate that is D-glucosamine substituted by a phosphate group at position 6.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of ascr#22.


A 2,5-dihydro-1,3-thiazole carrying carboxy-, methyl- and (2-phosphonooxy)ethylidene-substituents at positions 2, 4 and 5 respectively.


N-hexanoylphytosphingosine 1-phosphate

A ceramide 1-phosphate in which the sphingoid and acyl components are specified as phytosphingosine and hexanoyl respctively.


6-phospho-2-dehydro-D-gluconic acid

A ketoaldonic acid phosphate that is the 6-phospho derivative of 2-dehydro-D-gluconic acid.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-2-hydroxy-4-methylpentanoic acid.


A mannosylinositol phosphorylceramide compound having an inositol 1-phosphoryl group attached to the mannose residue and a tetracosanoyl group attached to the ceramide nitrogen, with no hydroxylation at C-4 of the long-chain base, and hydroxylation at C-2 of the very-long-chain fatty acid.


monophosphoglyceric acid

A glyceric acid phosphate in which only one of the hydroxy groups has been phosphorylated.


A hexadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (11Z)-hexadec-11-enoic acid.


A 3-hydroxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-hydroxy-3-(4-hydroxyphenyl)propionic acid.


fructosamine 3-phosphate

A hexosamine phosphate that is fructosamine carrying a monophosphate group at position 3. The deglycation product of fructosamine


undecanoyl-CoA

A medium-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of undecanoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (11Z,14Z,17Z,20Z,23Z)-3-oxohexacosapentaenoic acid.


GDP-L-galactose

A GDP-galactose where the galactose moiety has L-configuration.


A dTDP-sugar having 3-acetamido-3,6-dideoxy-alpha-D-galactopyranose (3-amino-3-deoxy-alpha-D-fucopyranose) as the sugar component.


LENIOLISIB PHOSPHATE

A phosphate salt obtained by reaction leniolisib with one equivalent of phosphoric acid. It is used to treat activated phosphoinositide 3-kinase delta (PI3Kdelta) syndrome in adults and children 12 years of age and older.


GS-441524 monophosphate

A C-nucleoside phosphate that is GS-441524 in which the 5'-hydroxy group has been replaced by a phosphate group. In cells, GS-441524 monophosphate gets converted into the pharmacologically active triphosphate form (GS-443902).


UDP-N-acetyl-beta-L-fucosamine

A UDP-amino sugar having N-acetyl-beta-L-fucosamine as the amino sugar component.


A 3-hydroxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxy-4-isopropenylcyclohexane-1-carboxylic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (13Z)-icosenoic acid.


A hydroxyglutaryl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-2-hydroxyglutaric acid.


coenzyme F390-A

8-OH adenylated form of the deazaflavin coenzyme F420.


N-acetyl-D-hexosamine 1-phosphate

A hexosamine phosphate having the phospho group at the 1-position.


malonyl-CoA methyl ester

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of malonic acid monomethyl ester.


tris phosphate

A phosphate salt resulting from the reaction of equimolar amounts of tris and phosphoric acid.


D-galactosamine 6-phosphate

A galactosamine phosphate that is D-galactosamine substituted at position 1 by a monophosphate group.


hexadecanedioyl-CoA

An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with one of the two carboxy groups of hexadecanedioic acid.


A CMP-sugar having 3-deoxy-D-glycero-beta-D-galacto-nonulosonic acid as the sugar component.


An inositol phosphoceramide compound having a 2-hydroxyhexacosanoyl group amide-linked to a C20 sphinganine, no hydroxylation at C-4 of the long-chain base, and hydroxylation at C-2 of the very-long-chain fatty acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z,12Z,15Z,18Z)-3-oxotetracosatetraenoic acid.


N-acylphytosphingosine 1-phosphate

A ceramide 1-phosphate in which the sphingoid component is specified as phytosphingosine.


A UDP-amino sugar having N-acetylgalactosamine-5,6-ene as the amino sugar component.


N-tetracosanoylsphingosine 1-phosphate

A ceramide 1-phosphate that is N-tetracosanoyl derivative of sphingosine.


An S-acyl-4'-phosphopantetheine obtained by formal condensation of the thiol group of D-pantetheine 4'-phosphate with the carboxy group of hexadecanoic acid.


A disaccharide phosphate consisting of 6-O-phospho-alpha-D-mannopyranose and D-mannopyranose residues joined in sequence by a (1->6) glycosidic bond.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxystearic acid.


An organic phosphoramidate obtained by formal condensation of the phosphate group of AMP with the amino group of L-morpholine.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (8Z,11Z,14Z,17Z,20Z,23Z)-3-oxohexacosahexaenoic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2R)-3,3,4-trimethyl-6-oxo-3,6-dihydro-1H-pyran-2-yl]acetic acid.


A dTDP-sugar having 4-dehydro-6-deoxy-alpha-D-gulose as the sugar component.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (S)-3-hydroxyisobutyric acid.


name: phosphoric acid (3-methylphenyl) phenyl (2,2,2-trifluoro-1-phenylethyl) ester


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of (2E)-oct-2-enedioic acid.


An octadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (6Z)-octadecenoic acid.


allodeoxycholoyl-CoA

A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of allodeoxycholic acid.


TRIPHENYL PHOSPHATE

An  aryl phosphate resulting from the formal condensation of phosphoric acid with 3 mol eq. of phenol.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (19Z,22Z,25Z,28Z,31Z)-tetratriacontapentaenoic acid.


A 3-hydroxypropionyl-CoA having a 4-hydroxy-3-methoxyphenyl group at the 3-position.


A 3-oxoacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxoicosanoic acid.


2,3-bisphosphoglyceric acid

A bisphosphoglyceric acid that is glyceric acid carrying two phospho substituents at positions 2 and 3.


A polysaccharide phosphate composed of a backbone of beta-D-ManNAc-(1->4)-alpha-D-Glc-(1->2)-alpha-L-Rha-1-P repeating units connected by phosphodiester linkages between position 1 of the Rha residues and position 4 of the ManNAc residues.


An inositol phosphomannosylinositol phosphoceramide compound having a hexacosanoyl group attached to the ceramide nitrogen, hydroxylation at C-4 of the long-chain base, and hydroxylation at C-2 and C-3 of the very-long-chain fatty acid.


A 2-oxo monocarboxylic acid that is 2-oxobutanoic acid which is substituted by a phosphonooxy group at position 4 and a hydroxy group at the 3-pro-R position.


A dTDP-sugar having 3-amino-3,6-dideoxy-alpha-D-glucose as the sugar component.


An unsaturated fatty acyl-CoA in which the S-acyl group contains a double bond between positions 2 and 3.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (16Z,19Z,22Z,25Z,28Z,31Z)-tetratriacontahexaenoic acid.


(KDO)4-lipid IVA

Lipid IVA glycosylated with four 3-deoxy-D-manno-octulosonic acid (KDO) residues.


A myo-inositol monophosphate derivative consisting of 1-O-(6-thiohexylphosphono)-D-myo-inositol having an alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl residue at the 6-position.


sphingoid 1-phosphate

A generic class of  phosphosphingolipids, encompassing monophosphorylated derivatives of sphinganine, its homologues and stereoisomers, as well as the hydroxy and unsaturated derivatives of these compounds.


phosphomycoketide C32

A C32 phosphomycoketide in which all five stereocentres have S-configuration.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (23Z,26Z,29Z,32Z,35Z)-3-oxooctatriacontapentaenoic acid.


UDP-N-acetyl-alpha-D-muramic acid

A UDP-N-acetyl-D-muramate in which the anomeric centre of the pyranose fragment has alpha-configuration.


A purine 2'-deoxyribonucleoside 5'-monophosphate having 8-oxo-7,8-dihydroguanine as the nucleobase.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z,12Z)-hexadecadienoic acid.


dihydrosphingosine 1-phosphate

A sphingoid 1-phosphate that is the monophosphorylated derivative of  sphinganine.


An N-acyl-D-glucosamine 1-phosphate in which the phosphate group of 2-(acetylamino)-2-deoxyglucose 1-phosphate is esterified by the alcoholic hydroxy group of L-serine.


UDP-D-glucose

A UDP-sugar having D-glucose as the sugar component.


dTDP-rhamnose

A dTDP-sugar having either D- or L-rhamnose as the sugar component.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 5,6-epoxy-(8Z,11Z,14Z)-icosatrienoic acid.


5'-phosphonucleoside 3'-diphosphate

A nucleoside bisphosphate compound having a phosphate group at the 5'-position and a diphosphate group at the 3'-position.


A 3-hydroxy-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-hydroxydecanoic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#38.


An inositol phosphoceramide compound having a tetracosanoyl group amide-linked to a C20 sphinganine.


hydroxyacyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any hydroxycarboxylic acid.


pivaloyl-CoA

A short-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of pivalic acid.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of trans-2-dodecenedioic acid.


A GDP-sugar having 4-dehydro-3,6-dideoxy-alpha-D-mannose as the sugar fragment.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3beta-hydroxychola-5,20(22)-dien-24-oic acid.


UDP-alpha-D-kanosamine

A UDP-amino sugar having alpha-D-kanosamine as the amino sugar component.


A TDP sugar having 4-dehydro-6-deoxy-D-galactose as the sugar fragment.


A disaccharide phosphate consisting of a 6-O-phosphono-alpha-D-mannopyranose residue and an alpha-D-mannopyranose residue joined in sequence by a (1->6) glycosidic bond.


A UDP-amino sugar having N-acetyl-2-amino-2-deoxy-D-glucuronic acid as the sugar component.


A 2-enoyl-CoA in which the double bond between positions 2 and 3 of the S-acyl group has cis- geometry.


A 2-carboxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-carboxymyristic acid.


A  2,3-trans-enoyl -CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,4Z,7Z,10Z,13Z,16Z,19Z)-docosaheptaenoic acid.


An inositol phosphoceramide in which the acyl group is hydroxylated at position 2 and the ceramide base is hydroxylated at position 4.


A pent-2-enoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E)-pentenoic acid.


A prenol phosphate comprising (2E)-4-hydroxy-3-methylbut-2-en-1-ol having an O-diphosphate substituent.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-oxepin-2(3H)-ylideneacetic acid.


dicetyl hydrogen phosphate

The dihexadecyl ester of phosphoric acid.


inositol phosphodihydroceramide

An inositol phosphoceramide in which a D-myo-inositol residue is linked via a phosphodiester bridge to a C18 dihydroceramide moiety.


triammine(dGMP)platinum

A cisplatin-modified (di)nucleotide in which cisplatin has formed an adduct with one molecule of dGMP and one molecule of ammonia.


UDP-N-acetyl-D-mannosaminouronic acid

A UDP-N-acetyl-mannosaminouronic acid in which the N-acetyl-mannosaminouronic acid fragment has D-configuration.


A D-ribofuranose 5-phosphate with an beta-configuration at anomeric position.


2-deoxyribose triphosphate

A 2-deoxyribose phosphate bearing a triphosphate substituent at an unspecified position.


serine phosphoethanolamine

The O-phosphoethanolamine derivative of serine.


A choloyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxodeoxycholic acid.


fructoselysine 6-phosphate

An L-lysine derivative having a 6-phosphofructosyl group attached to the side-chain amino group.


A disaccharide phosphate consisting of alpha-D-galactosyl-(1->3)-alpha-D-glucose having a alpha-L-rhamnosyl-(1->4)-D-ribitol-5-phosphate moiety attached at the 2-position of the galactose via a phosphodiester linkage.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z,12R)-12-hydroxyoctadec-9-enoic (ricinoleic) acid.


A tetradecenoyl-CoA having cis-tetradec-3-enoyl as the S-acyl group.


A mannosylinositol phosphorylceramide compound having a hexacosanoyl group amide-linked to a C18 phytosphingosine base, with hydroxylation at C-2 of the C26 very-long-chain fatty acid.


A 3-hydroxy fatty acyl-CoA in which the 3-hydroxy fatty acyl group is specified as 3-hydroxyicosanoyl.


A 1-alkyl-sn-glycerol 3-phosphate in which the alkyl group is specified as oleyl.


N-acyl-D-mannosamine phosphate

Any mannosamine phosphate having D-configuration and carrying an N-acyl substituent.


hexaethylene glycol monophosphate

A hydroxypolyether phosphate consisting of hexaethylene glycol carrying a single O-phospho group.


A branched oligosaccharide phosphate comprising a D-glucose residue, an N-acetyl-D-glucosamine residue, two L-glycero-D-manno-heptose residues (one of which is phosphoethanolamine-substituted on O-3), with linkages as shown and with a 3-deoxy-D-manno-oct-2-ulosonic acid (2-keto-3-deoxy-D-mannooctanoic acid, Kdo) residue at the reducing end. Corresponds to the galE mutant of the core oligosaccharide of Neisseria meningitidis.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxyoctacosanoic acid [(R)-3-hydroxymontanic acid].


A linear oligosaccharide phosphate comprising an N-acetyl-alpha-D-glucosamine residue,an L-glycero-alpha-D-manno-heptose residue phosphoethanolamine-substituted on O-3, another L-glycero-alpha-D-manno-heptose residue and a 3-deoxy-D-manno-oct-2-ulosonic acid (2-keto-3-deoxy-D-mannooctanoic acid, Kdo) in a (1->2), (1->3), (1->5) sequence. Corresponds to the icsb mutant of the core oligosaccharide of Neisseria meningitidis.


5-phospho-L-arabinonic acid

An arabinonic acid derivative that is L-arabinonic acid carrying a single phospho substituent at position 5.


methyl-branched fatty acyl-CoA

A branched-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any methyl-branched fatty acid.


4-phospho-D-erythronic acid

The D-enantiomer of 4-phosphoerythronic acid.


isopentadecanoyl-CoA

A methyl-branched fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of isopentadecanoic acid.


A lipid A derivative that consists of a branched octasaccharide phosphate made up from two D-galactose residues, two N-acetyl-D-glucosamine residues, a D-glucose residue, two L-glycero-D-manno-heptose residues (one of which is phosphoethanolamine-substituted on O-3), with linkages as shown and with a 3-deoxy-D-manno-oct-2-ulosonic acid (2-keto-3-deoxy-D-mannooctanoic acid, Kdo) residue at the reducing end connected via an alpha(2->6) linkage to a de-O-acylated lipid A.  Corresponds to the de-O-acylated lipid A conjugate of the core oligosaccharide of Neisseria meningitidis.


mevalonyl-CoA

An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of mevalonic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#37.


tetracosanoyl-CoA

A very long-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of tetracosanoic (lignoceric) acid. It is an intermediate in the biosynthesis of unsaturated fatty acids.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 7alpha,12alpha-3-oxochol-4-en-24-oic acid.


An L-tyrosine derivative having a 3'-O-{[(6-aminohexyl)oxy](hydroxy)phosphoryl}uridine phosphate attached to the phenolic hydroxy group via a phosphoester linkage.


CMP-sugar

A pyrimidine nucleotide-sugar having CMP as the nucleotide component attached to an unspecified sugar via an anomeric diphosphate linkage.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,21Z,24Z,27Z,30Z,33Z)-3-hydroxyhexatriacontapentaenoic acid.


A diadenosyl pentaphosphate having the two 5'-adenosyl residues attached at the P(1)- and P(5)-positions.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#3.


A 3-oxo-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxohexacosanoic acid.


A nucleotide conjugate consisting of CDP joined at the 1L-position of myo-inositol via a diphosphate linkage.


name: E. coli strain F576 LPS core oligosaccharide

description: A branched thirteen-membered oligosaccharide phosphate consisting of two galactose residues, three glucose residues, two 3-deoxy-D-manno-oct-2-ulosonic acid residues, three L-glycero-alpha-D-manno-heptose residues and three glucosamine residues, one of which is acetylated and another is at the reducing end. The unit constitutes the core oligosaccharide structure of enterobacterial lipopolysaccharide obtained from E. coli strain F576.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 12-hydroxyoctadecanoic acid.


An aminoacyl phosphate consisting of N-acetyl-L-2-aminoadipic acid having the phosphate group located at the 6-position.


A nucleoside triphosphate analogue that is guanosine substituted at position 5' by a (beta,gamma-methylene)triphosphate group.


dimethylallyl-UTP

An organic triphosphate formed by condensation between the gamma-phospho group of uridine 5'-triphosphate and prenol (gamma,gamma-dimethylallyl alcohol).


A 2-hydroxyhexadecanoyl-CoA  that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-2-hydroxyhexadecanoic acid.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 9alpha-hydroxy-3-oxo-23,24-bisnorchola-1,4-dien-22-oic acid.


bis(glycerophospho)glycerol

A glycerol phosphate that consists of a linear array of three glycerol units connected by phosphodiester linkages.


A non-proteinogenic L-alpha-amino acid that is L-tyrosine phosphorylated at the phenolic hydroxy group.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 20-methyl-3-oxopregna-4,17-dien-21-oic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,15Z)-tetracosadienoic acid.


A UDP-sugar having 6-sulfoquinovose as the sugar component.


An unsaturated fatty acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z)-myristoleic acid.


bisphosphoglyceric acid

A glyceric acid phosphate in which both of the hydroxy groups have been phosphorylated.


An N-acetyl-D-mannosamine 6-phosphate having alpha-configuration at the anomeric centre.


A lipid A where the free primary hydroxy group of lipid A has a branched hexasaccharide attached.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of 3-oxodecanedioic acid.


propanoyl phosphate

The phosphate ester of propanoic acid.


The 1-O-allyl-5-phospho derivative of 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid.


3-ADP-2-phosphoglyceric acid

A 3-ADP-glyceric acid having a phosphate group at the 2-position of the glyceric acid moiety.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxo-5,6-dehydrosuberic acid.


oleoyl-CoA

An octadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oleic acid.


hexadecanoyl phosphate

An acyl monophosphate in which the acyl group is specified as hexadecanoyl (palmitoyl).


An amino octasaccharide made up from one alpha-D-glucose residue, three L-alpha-D-Hep residues (two of which are monophosphorylated), two alpha-Kdo residues and two monophosphorylated alpha-D-glucosamine residues (one of which is at the reducing end).


A disaccharide phosphate consisting of 2-O-(N-acetyl-beta-D-glucosaminyl)ribitol phosphorylated at O-1 of the ribitol residue; a 5-phosphate beta-WTA (Staphylococcus aureus Wall Teichoic Acid) analogue.


(Rp)-cGMPS

A nucleoside 3',5'-cyclic phosphorothioate having guanine as the nucleobase (the Rp-stereoisomer).


A mannosylated ceramide phosphoinositol compound having a hexacosanoyl group attached to the ceramide nitrogen, with hydroxylation at C-4 of the long-chain base.


1,3-Thiazole substituted at C-2, -4 and -5 with carboxy, methyl and 2-(phosphonooxy)ethyl groups respectively.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (13Z,16Z,19Z,22Z)-3-oxooctacosatetraenoic acid.


2-phospho-D-glyceric acid

A 2-phosphoglyceric acid in which the glyceric acid moiety has D (R) configuration.


deoxyribonucleotide

A nucleotide in which the ribose moiety has one or more of its hydroxy groups substituted by hydrogen.


A hydroxy fatty-acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxytetradecanoic acid.


A is a monophosphoglyceric acid having the phosphate group at the 3-position as well as an alpha-D-mannosyl residue attached at the 2-position.


An organic heterotetracyclic compound obtained by intramolecular formation of a C-C bond between positions 8 and 5' of dGMP.


ceramide phosphoethanolamine (35:2)

A ceramide phosphoethanolamine in which the sphingoid base and acyl group contains a total of 35 carbon atoms and 2 double bonds.


ribulosamine 3-phosphate

An amino sugar phosphate that is any ribulosamine carrying a monophosphate group at position 3. The deglycation product of ribulosamine


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (17Z,20Z,23Z,26Z)-3-oxodotriacontatetraenoic acid.


An inositol phosphomannosylinositol phosphoceramide compound having a hexacosanoyl group attached to the ceramide nitrogen, hydroxylation at C-4 of the long-chain base, and no additional hydroxylation of the very-long-chain fatty acid.


A nucleoside monophosphate analogue that is 2'-deoxyuridine-5'-monophosphate in which the hydrogen at position 5 on the uracil ring is replaced by a carboxy group.


A Delta(11)-acyl-CoA having trans-tetradec-11-enoyl as the S-acyl group.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of cis,cis-tetradeca-5,8-dienoic acid


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 5-hydroxyferulic acid.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxybutanoic acid.


biotinyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of biotin.


glyceraldehyde 3-phosphate

An aldotriose phosphate that is the 3-phospho derivative of glyceraldehyde. It is an important metabolic intermediate in several central metabolic pathways in all organisms.


inositol phosphoceramide

A phosphosphingolipid in which an inositol residue and the ceramide moiety are linked via a phosphodiester bridge. The ceramide moiety contains substituents R(1) and R(2) which vary with different sphingoid bases and fatty acyl moieties.


name: SODIUM beta-NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE


mannose-(1D-myo-inositol 1-phosphate)2

A phosphorylated mannosylinositol compound which constitutes the head group of some mannosylinositol phosphorylceramides (the M(IP)2Cs), and is a product of their catabolism.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (15Z,18Z,21Z,24Z,27Z)-triacontapentaenoic acid.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3beta-hydroxychol-5-en-24-oic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (19Z,22Z,25Z,28Z)-tetratriacontatetraenoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 15-hydroxy-(5Z,8Z,11Z,13E)-icosatetraenoic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#30.


A nucleotide-amino acid that is the N(6)-L-threonylcarbamoyl derivative of 2-methylthioadenine 5'-monophosphate.


A pyridine nucleotide having pyridinium-3,5-bisthiocarboxylic acid as the nucleobase.


adenosylcobinamide phosphate

An O-phosphocorrinoid that is cobinamide phosphate having a 5'-adenosyl group attached to the central cobalt atom.


dTDP-D-galactose

The D-enantiomer of dTDP-galactose.


(9Z)-12-(phosphonooxy)octadecenoic acid

A carboxyalkyl phosphate that is (9Z)-octadecenoic (oleic) acid carrying a phosphonooxy substituent at position 12.


agrocinopine

A subclass of opines, which are low molecular weight compounds found in plant crown gall tumours or hairy root tumours produced by parasitic bacteria of the genus Agrobacterium. Agrocinopines are set of sugar phosphodiester opines known to induce transfer of another Ti plasmid, pTiBo542.


A ketoaldonic acid phosphate that is 3-deoxy-D-glycero-beta-D-galacto-nonulosonic acid carrying a monophosohate substituent at position 9.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,16Z,19Z,22Z,25Z,28Z,31Z)-3-hydroxytetratriacontahexaenoic acid.


trans-feruloyl-CoA

A feruloyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-feruloic acid.


An acyl-CoA that results from formal condensation of the thiol group of coenzyme A with the 1-carboxy group of 3-hydroxyadipic acid.


lauroyl-CoA

A medium-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of lauric (dodecanoic) acid.


hydroxybenzoyl-CoA

Any member of the class of  benzoyl-CoAs having hydroxybenzoyl as the aroyl substituent.


UDP-alpha-D-mannuronic acid

A UDP-sugar having alpha-D-mannuronic acid as the sugar component.


aldonic acid phosphate

An aldonic acid in which at least one of the hydroxy groups has been phosphorylated.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,13Z)-docosadienoic acid.


ALLYL PYROPHOSPHATE

An organic diphosphate formed by condensation of diphosphoric acid with allyl alcohol.


A very long-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-hydroxytetracosanoic acid.


ethyl-dTDP

An organic diphosphate formed by condensation between the beta-phospho group of thymidine diphosphate and ethanol.


A medium-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 7-methyloctanoic acid.


S. aureus (alpha-1,4)-GlcNAc WTA-trimer

A Staphylococcus aureus wall technoic acid (WTA) fragment consisting of a chain of three ribitol 5-phosphate (RboP) residues modified with an alpha-D-GlcNAc residue linked to C-4 of the central RboP residue.


ORITAVANCIN DIPHOSPHATE

A phosphate salt obtained by combining oritavancin with two molar equivalents of phosphoric acid. Used for the treatment of acute bacterial skin and skin structure infections caused or suspected to be caused by susceptible isolates of designated Gram-positive microorganisms.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#15.


An NADP obtained by formal reduction of the 1,2-position in the pyridine ring of beta-NADP.


1D-myo-inositol 1,2-cyclic phosphate

A  myo-inositol cyclic phosphate that is the 1,2-cyclic phosphate derivative of 1D-myo-inositol.


ceramide 1-phosphate

A phosphosphingolipid consisting of any ceramide phosphorylated at position 1


crotyl diphosphate

An organic diphosphate formed by condensation of diphosphoric acid with crotyl alcohol.


An S-acyl-4'-phosphopantetheine obtained by formal condensation of the thiol group of D-pantetheine 4'-phosphate with the carboxy group of octanoic acid.


A nucleoside 3',5'-cyclic phosphate that is cAMP in which the aza methine (C-H) group at positions 7 and 8 on the purine fragment are transposed.


perfluorodecyl phosphate

A monoalkyl phosphate in which the alkyl group specified is perfluorodecyl.


fatty acyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any fatty acid.


A 3-oxo-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (11Z)-3-oxoicosa-11-enoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (10Z,13Z,16Z,19Z,22Z,25Z)-3-oxooctacosahexaenoic acid.


A ketoaldonic acid phosphate consisting of 3-deoxy-D-manno-oct-2-ulosonic acid having a phospho group at the 8-position.


A trehalose monomycolate that is alpha,alpha-trehalose 6-phosphate carrying an additional mycolyl substituent at position 6'.


A lipid A derivative that constitutes the lipopolysaccharide (LPS) core region of Proteus penneri strain 13. In the structural diagram lipid A substituents R1, R2, R3 and R4 are alkyl chains and R5 and R6 are either acyl chains or H. Structural variations can occur: the alpha-LD-Hep substituent linked (1->7) to alpha-LD-Hep6PEtn may be further substituted (1->7) by a beta-D-GalAN residue; if so, then the [alpha-LD-Hep-(1->2)-alpha-DD-Hep branch linked (1->2) to alpha-D-GalA may be absent.


1,2-diacylglycerol 3-diphosphate

A glycerol 3-pyrophosphate compound having acyl substituents on the oxygen atoms at positions 1 and 2.


(Sp)-cAMPS

A nucleoside 3',5'-cyclic phosphorothioate having adenine as the nucleobase (the Sp-stereoisomer).


GDP-alpha-D-glucose

A GDP-D-glucose having alpha-configuration at the anomeric centre.


organic triphosphate

An organic phosphate ester formed by condensation of triphosphoric acid with one or more alcohols.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-2-heptadecenoic acid.


A branched hexasaccharide corresponding to part of the lipooligosaccharide from N. gonorrhoeae L8.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,8Z,11Z,14Z,17Z)-3-hydroxyicosatetraenoic acid.


A branched amino tetrasaccharide and oligosaccharide phosphate comprising an N-acetyl-D-glucosamine residue, a D-glucose residue and two L-glycero-D-manno-heptose residues (one of which is phosphoethanolamine-substituted on O-3 and O-6), with linkages as shown.


name: O-alpha-D-glucosyl poly(glycerol phosphate) macromolecule

description: A poly(glycerol phosphate) macromolecule having alpha-D-glucosyl residues at the secondary hydroxy groups on the repeating units.


alkynic fatty acyl-CoA

A fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any alkynic fatty acid.


An oligosaccharide phosphate that is a branched nonasaccharide corresponding to the core oligosaccharide of N. meningitis L2 type.


A medium-chain unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of cis,cis-dodeca-3,6-dienoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (12Z,15Z,18Z,21Z,24Z)-triacontapentaenoic acid.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxyhexacosanoic acid [(R)-3-hydroxycerotic acid].


oxythiamine(1+) pyrophosphate

A 1,3-thiazolium cation that is the cationic form of oxythiamine pyrophosphate


A dTDP-sugar having beta-L-4-epi-vancosamine as the sugar component.


beta-L-Ara4N-lipid A

A lipid A derivative in which one of the phosphate hydrogens of any lipid A has been replaced by a 4-amino-4-deoxy-beta-L-arabinopyranosyl residue (R can be either hydrogen or a fatty acyl group).


A UDP-amino sugar having N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine as the sugar component.


diadenosyl tetraphosphate

A diadenosyl polyphosphate that consists of two adenosinyl moieties bridged by a tetraphosphate.


A monoalkyl phosphate that is pentane substituted at positions 3 and 4 by oxo groups, at position 2 by a hydroxy group and at position 1 by a phosphooxy group (the S-enantiomer).


name: Nicotinamide arabinoside adenine dinucleotide


An octadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-9-octadecenoic acid.


An NADP obtained by formal reduction of the 1,6-position in the pyridine ring of beta-NAD.


A class of phytoceramide derivatives containing a inositol-P-mannose-inositol-P head group. R1 varies with different sphingoid bases, and R2 varies with different fatty acyl moieties.


O-phosphoviomycin

A derivative of viomycin having a phospho group attached to the side-chain OH group of one of the serine residues.


A CDP-4-dehydro-3,6-dideoxy-D-glucose in which the anomeric centre of the pyranose fragment has alpha-configuration.


A dTDP-sugar having 3-dehydro-4,6-dideoxy-D-glucose as the sugar component.


An L-glutamine derivative in which one of the side-chain amide hydrogens of L-glutamine has been replaced by a phospho group.


Any dinucleotide where the two components are connected via a (2'->5')-phosphodiester linkage.


ceramide phosphoethanolamine

Any of a class of phosphosphingolipids in which the amino group of a sphingoid base is in amide linkage with one of several fatty acids, while the terminal hydroxy group of the sphingoid base is esterified to phosphorylethanolamine.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (5Z)-tetradecenoic acid.


A N-acyltetradecasphingosine-1-phosphoethanolamine in which the acyl group specified is icosanoyl.


A dTDP-sugar having 4-dehydro-6-deoxy-alpha-D-glucose as the sugar component.  It is an intermediate in dTDP-rhamnose biosynthesis.


UDP-sugar having 3-keto-alpha-D-glucose as the sugar component.


A Delta(11)-acyl-CoA having cis-tetradec-11-enoyl as the S-acyl group.


A cholestenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of Delta(4)-dafachronic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#26.


An oligosaccharide phosphate corresponding to the oligosaccharide repeating unit of Leishmania major promastigote lipophosphoglycan.


dCpdG

A (3'->5')-dinucleotide consisting of 2'-deoxyguanosine having a 2'-deoxycytidylyl-3-phospho moiety attached at the 5-position.


MONOCROTOPHOS

An alkenyl phosphate that is the 4-(methylamino)-4-oxobut-2-en-2-yl ester of dimethyl phosphate.


A trisaccharide derivative and oligosaccharide phosphate comprised of one alpha-D-glucopyranosyl and two L-glycero-alpha-D-manno-heptopyranosyl residues.  The sequence is present in enterobacterial lipopolysaccharide from all E. coli, Salmonella and Shigella.


ceramide phosphoethanolamine (37:2)

A ceramide phosphoethanolamine in which the sphingoid base and acyl group contains a total of 37 carbon atoms and 2 double bonds.


An inositol phosphoceramide compound having a hexacosanoyl group amide-linked to a C20 phytosphingosine base, with hydroxylation at C-2 and C-3 of the C26 very-long-chain fatty acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,7Z,10Z,13Z,16Z)-docosapentaenoic acid.


A branched amino pentasaccharide and oligosaccharide phosphate comprising an N-acetyl-D-glucosamine residue, two D-glucose residues and two L-glycero-D-manno-heptose residues (one of which is phosphoethanolamine-substituted on O-6), with linkages as shown.


A ceramide phosphoinositol compound having a tetracosanoyl group amide-linked to a C20 phytosphingosine base, with no additional hydroxylation of the very-long-chain fatty acid.


A nucleoside monophosphate analogue derived from the formal condensation of the N(1)-nitrogen of adenine with 2,5-anhydro-4-[(phosphonooxy)methyl]-alpha-L-lyxofuranose.


A hydroxy fatty-acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxybehenic acid.


ethyl-ddTTP

An organic triphosphate formed by condensation between the gamma-phospho group of 3'-deoxythymidine 5'-triphosphate and ethanol.


A phosphate-linked oligosaccharide analogue consisting of seven alpha-N-acetyl-D-glucosaminyl residues, joined by (1->4)-phosphodiester linkages. It is a constituent 7-repeating-unit segment of Neisseria meningitidis serogroup X capsular polysaccharide (MenX), the structural diagram of which shows parts of phosphodiester linkages which are present at both the reducing and non-reducing ends of the heptasaccharide unit.


A nucleotide conjugate consisting of CDP joined at the 1-position of 2,3-bis-O-(geranylgeranyl)-sn-glycerol via a diphosphate linkage.


A 3-oxo-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxotriacontanoic acid (3-oxomelissic acid).


A polysaccharide derivative with a repeating unit consisting of beta-D-glucosyl, beta-D-galactosyl and beta-L-rhamnosyl residues all linked (1->4), to the galactosyl residue of which is attached a glycerol-2-phosphate group via a (P->2) linkage and an alpha-L-rhamnosyl residue linked (1->2), with all repeating units being linked (1->4). Capsular polysaccharide of Streptococcus pneumoniae serotype 23F.


An omega-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z,12Z)-18-hydroxyoctadecadienoic acid.


A 3-hydroxy fatty acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxypentanoic acid.


diadenosine 5',5'-diphosphate

A diadenosyl diphosphate having two 5'-adenosyl residues attached at the P(1)- and P(2)-positions of the diphosphate.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,13Z,16Z,19Z,22Z,25Z)-3-hydroxyoctacosapentaenoic acid.


uracil octosyl acid 5'-phosphate

An N-glycosyl compound with formula C12H15N2O11P that is a common intermediate in the biosynthesis of nikkomycins and polyoxins by bacteria.


A hydroxybenzoyl-CoA that is the S-(4-hydroxybenzoyl) derivative of coenzyme A.


A uridine phosphate in which the uridine bears an additional carboxymethyl substituent at position 5 and the phosphono group is at the 5'-oxygen.


A medium-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-3-cis-5-octadienoic acid.


A lipid A where the free primary hydroxy group of lipid A has a branched octasaccharide attached.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,11Z,14Z,17Z)-3-hydroxyicosatrienoic acid.


An aroyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2,3-dihydroxy-2,3-dihydrobenzoic acid.


A lipid A derivative that consists of a branched dodecasaccharide made up from four galactose, six glucose and two Kdo (one at the reducing end) units connected to lipid A via an alpha-(2->6)-linkage.


A GDP-hexose having 6-deoxy-alpha-D-altrose as the hexose component.


purine nucleotide-sugar

A nucleotide-sugar whose nucleobase is a purine.


A UDP-N-acetyl-D-mannosaminouronate in which the anomeric centre of the pyranose fragment has alpha-configuration.


A hexadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (7Z)-hexadecenoic acid.


D-xylulose 1,5-bisphosphate

A xylulose phosphate that is D-xylulose carrying two phospho groups at positions 1 and 5.


norbaeocystin

A tryptamine alkaloid that is tryptamine carrying an additional phosphoryloxy substituent at position 4.


alpha-D-sedoheptulopyranose 7-phosphate

A ketoheptose phosphate consisting of alpha-D-sedoheptulopyranose  having a phosphate group at the 7-position.


A ribose derivative that is the 5-phospho derivative of phenyl alpha-D-ribofuranoside.


nucleotide-amino acid

An amino acid derivative that is any conjugate between a nucleotide and an amino acid.


A UDP-amino sugar having 4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine as the amino sugar component.


dTDP-alpha-L-rhamnose

The alpha-anomer of dTDP-L-rhamnose.


propanoyl-CoAs

Any short-chain fatty acyl-CoA  in which the the fatty acid specified is propanoic acid or its derivatives.


Rp-cAMPS

A nucleoside 3',5'-cyclic phosphorothioate having adenine as the nucleobase (the Rp-stereoisomer).


1-(methylthio)ribulose 5-phosphate

A ketopentose phosphate that is D-ribulose 5-phosphate in which the 1-hydroxy group is replaced by a methylthio group.


name: PHOSPHORIC ACID DIETHYL ESTER PHENYL ESTER


maltose 6'-phosphate

A maltose phosphate having a single monophosphate group placed at position 6'.


An N-acylphytosphingosine-1-phosphoethanolamine in which the N-acyl group is specified as hexadecanoyl.


UDP N-acetyl-glucosamine

A UDP-amino sugar having N-acetyl-alpha-D-glucosamine as the amino sugar component.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (24E)-3alpha,7alpha-dihydroxy-5beta-cholest-24-en-26-oic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of 4-carboxy-2-thioxobutanoic acid.


guanyl nucleotide

A nucleotide having guanine as the base.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (19Z,22Z,25Z,28Z)-3-oxotetratriacontatetraenoic acid.


The 5-N-formyl derivative of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of 9,17-dioxo-1,2,3,4,10,19-hexanorandrostan-5-oic acid.


A 3-hydroxyicosanoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3S)-hydroxyicosanoic acid.


A disaccharide phosphate consisting of 6-phospho-alpha-D-mannopyranose and D-mannopyranose residues joined in sequence by a (1->3) glycosidic bond.


A cholestanoyl-CoA formed by thioester linkage between  3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestan-26-oic acid and coenzyme A.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (10E,12Z)-hexadecadienoic acid.


sinapoyl-CoA

A trans-2-enoyl-CoA that is the S-sinapoyl derivative of coenzyme A.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (12Z,15Z,18Z,21Z)-tetracosatetraenoic acid.


A ribose monophosphate that is D-ribofuranose 5-phosphate in which the anomeric OH group is replaced by a 4-hydroxy phenyl group (the beta-D-anomer).


name: E. coli strain F470 LPS core oligosaccharide 1

description: A branched twelve-membered oligosaccharide phosphate consisting of two galactose residues, three glucose residues, two 3-deoxy-D-manno-oct-2-ulosonic acid residues, three L-glycero-alpha-D-manno-heptose residues and two glucosamine residues, one of which is at the reducing end.  The unit constitutes one of the two core oligosaccharide structures of enterobacterial lipopolysaccharide obtained from E. coli strain F470.


A long-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 12-methyloctadecanoic acid.


A glycoside consisting of D-glyceric acid having an alpha-D-mannosyl-(1->2)-alpha-D-glucosyl residue at the 2-position and a phospho group at the 3-position


lufotrelvir

An indolecarboxamide resulting from the formal condensation of the carboxy group of 4-methoxy-1H-indole-2-carboxylic acid with the primary amino group of N-[(2S)-3-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]-4-(phosphonooxy)butan-2-yl]-L-leucinamide. It is the phosphate prodrug of PF-00835231, an anticoronaviral agent.


A hydroxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxyisobutanoic acid.


An (S)-3-hydroxyacyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of (S)-3-hydroxyoctanedioic acid.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3S)-3-hydroxyoleic acid.


A C-nucleoside phosphate that is pseudouridine 5'-monophosphate, bearing an additional N(3)-methyl substituent.


A mannosylinositol phosphorylceramide in which the sphingoid moiety is specified as dihydroceramide.


psicosamine 3-phosphate

A hexosamine phosphate that is any fructosamine carrying a monophosphate group at position 3. The deglycation product of psicosamine.


A disaccharide phosphate that is N'-monoacetylchitobiose substituted at position 6' by a phospho group.


A polysaccharide phosphate composed of a backbone of alpha-D-glucose residues connected by phosphodiester linkages between positions 1 and 4 of adjacent residues; structure of the Neisseria meningitidis X capsular polysaccharide.


sulfoacetyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of Co-A with the carboxylic acid group of sulfoacetic acid.


crotonoyl-CoA

The (E)-isomer of but-2-enoyl-CoA.


acyl diphosphate

An organic phosphate ester or anhydride formed by condensation of diphosphoric acid with a carboxylic acid.


2,3-bisphospho-D-glyceric acid

The D-enantiomer of  2,3-bisphosphoglyceric acid.


3-PHOSPHOGLYCERIC ACID

The D-enantiomer of 3-phosphoglyceric acid


An amino sugar phosphate that is the 6-O-phosphate of 3-amino-3-deoxy-D-glucopyranose.


An amino disaccharide (1,4'-bisphosphorylated glucosamine disaccharide) corresponding to the carbohydrate portion of E. coli J-5 lipid A.


3-phosphoglyceric acid

A monophosphoglyceric acid having the phospho group at the 3-position. It is an intermediate in metabolic pathways like glycolysis and calvin cycle.


A diadenosyl triphosphate having the two 5'-adenosyl residues attached at the P(1)- and P(3)-positions.


N-tetradecanoylsphingosine 1-phosphate

A ceramide 1-phosphate that is N-tetradecanoyl (myristoyl) derivative of sphingosine.


A mannosylated ceramide phosphoinositol compound having a tetracosanoyl group attached to the ceramide nitrogen, with hydroxylation at C-4 of the long-chain base.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,7Z,10Z,13Z,16Z,19Z)-3-hydroxydocosapentaenoic acid.


2-naphthyl dihydrogen phosphate

An aryl phosphate resulting from the formal condensation of phosphoric acid with 1 mol eq. of 2-naphthol. It is a substrate for phosphatase.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxycyclohexane-1-carboxylic acid.


lavandulyl diphosphate

The O-diphospho derivative of lavandulol.


A quaternary ammonium salt in which a positively charged nitrogen is substituted by three (omega-hydroxy)poly(oxyethane-1,2-diyl)groups and one stearyl group, the counterion being phosphate. It is commonly used as a constituent of hairsprays.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of (2Z)-2-sulfanylpent-2-enedioic acid.


coenzyme F420-1

The amide obtained by formal condensation of the carboxylic acid group of F420-0 with the amino group of L-glutamic acid.


A 3-oxo-fatty acyl-CoA obtained from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxodotriacontanoic acid (3-oxolacceroic acid).


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,11Z)-icosadienoic acid.


A ceramide phosphoethanolamine (39:2) obtained by formal condensation of the carboxy group of tetracosanoic acid with the amino group of any pentadecasphingadienine-1-phosphoethanolamine.


Lipid IVA glycosylated with four 3-deoxy-D-manno-octulosonic acid (KDO) residues.


A 2,3-trans-enoyl CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-2-tetracosenoic acid.


inositol C20 phosphophytoceramide

An inositol phosphoceramide in which a D-myo-inositol residue is linked via a phosphodiester bridge to a C20 phytoceramide moiety.


A UDP-amino sugar having 3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetyl-alpha-glucosamine as the amino sugar component.


name: E. coli strain O157 LPS core oligosaccharide R3

description: A branched ten-membered oligosaccharide phosphate consisting of three galactose residues, two glucose residues, one 4-phospho-D-glycero-alpha-D-manno-heptose residue, one L-glycero-alpha-D-manno-heptose residue, one 4-phospho-L-glycero-alpha-D-manno-heptose residue and two Kdo residues, one of which is at the reducing end. The unit constitutes one of the core oligosaccharide structures of enterobacterial lipopolysaccharide obtained from E. coli strain O157.


An oxo fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3,5,7-trioxododecanoic acid.


alpha-NADP(+)

A nicotinamide dinucleotide that is NADP(+) in which the anomeric centre of the ribosyldihydronicotinamide moiety has alpha- rather than beta-configuration.


ethyl-XTP

An organic triphosphate formed by condensation between the gamma-phospho group of xanthosine 5'-triphosphate and ethanol.


fingolimod-phosphate

A primary amino compound that is fingolimod in which one on the hydroxy groups has been converted into its dihydrogen phosphate derivative. It is the active metabolite of fingolimod.


ethylene glycol monophosphate

A hydroxyalkyl phosphate obtained by monophosphorylation of ethylene glycol.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (18Z,21Z,24Z,27Z,30Z)-hexatriacontapentaenoic acid.


A UDP-amino sugar compound having 2-acetamido-2,6-dideoxy-beta-D-xylo-hexopyranosyl-4-ulose as the sugar residue.


A myo-inositol monophosphate derivative consisting of 1-O-(6-thiohexylphosphono)-D-myo-inositol having an alpha-D-mannosyl-(1->2)-6-O-(2-aminoethylphosphono)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl residue at the 6-position.


An  octadecadienoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (5Z,11E)-octadecadienoic acid.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxytetradecanoic acid.


A lipid A derivative that consists of a branched decasaccharide made up from two galactose, give glucose, one N-acetylglucosamine and two Kdo (one at the reducing end) units connected to lipid A via an alpha-(2->6)-linkage.


fluoroacetyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of Co-A with the carboxylic acid group of fluoroacetic acid.


A 2,3-trans-enoyl CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-2-nonenoic acid.


NAD(P)

A coenzyme that may be NAD or NADP.


A dTDP-sugar having 3-dehydro-4,6-dideoxy-alpha-D-glucose as the sugar component.


N-octadecanoylsphingosine 1-phosphate

A ceramide 1-phosphate that is the N-octadecananoyl (stearoyl) derivative of sphingosine.


fluorobenzoyl-CoA

Any member of the class of benzoyl-CoAs having fluorobenzoyl as the aroyl substituent.


A 2-deoxyribose bisphosphate that is 2-deoxy-alpha-D-ribofuranose 3,5-bisphosphate in which the phosphate group at position 3 is esterfied by a 2-deoxy-alpha-D-ribofuranos-5-yl group.


A member of the class of muramic acids that is N-acetyl-alpha-D-muramic acid in which the anomeric hydroxy hydrogen has been replaced by a phospho group.


caffeoyl-CoA

An acyl CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of caffeic acid.


hexadecenoyl-CoA

A monounsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any hexadecenoic acid.


A myo-inositol monophosphate derivative consisting of 1-O-(6-thiohexylphosphono)-D-myo-inositol having an alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl residue at the 6-position.


sugar-phosphodiester opine

Any opine whose structure is based on a sugar phosphodiester.


6-aminohexyl phosphate

A monoalkyl phosphate in which the alkyl group is specified as 6-aminohexyl.


A poly(glycerol phosphate) compound having a D-alanyl-L-alanyl moiety attached to the hydroxy group of the repeating unit.


The 2(1)-phospho derivative of D-hamamelose.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxochol-4-en-24-oic acid.


aldehydo-D-arabinose 5-phosphate

The 5-phospho derivative of D-arabinose. It is an intermediate in the synthesis of lipopolysaccharides.


5'-phosphonucleoside 3'-diphosphate(5-)

Major species at pH 7.3


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2,6-dihydroxycyclohexane-1-carboxylic acid.


An oxo-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxylic acid group of (3S)-3-isopropenyl-6-oxoheptanoic acid.


UDP-glycopeptide having N-acetylmuramoyl as the glyco portion and L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine as the peptide portion (attached via an amide bond between the amino terminus and the muramoyl carboxy group).


A hexadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (6Z)-hexadecenoic acid.


2-(1-hydroxyethyl)thiamine diphosphate

A thiamine phosphate having a 1-hydroxyethyl substituent at the 2-position on the thiazolium ring and an O-diphosphate moiety.


The 5-phospho derivative of 2-dehydro-D-gluconic acid.


benzoyl-CoAs

Any  aroyl-CoA in which the  aroyl group is specified as benzoyl or its substituted derivative.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,11Z)-3-hydroxyoctadecenoic acid.


A dTDP-sugar having 4-dehydro-2,6-dideoxy-alpha-D-glucose as the sugar component.


A dTDP-sugar having 2-deoxy-beta-L-fucose as the sugar component.


alpha-maltose 6'-phosphate

A maltose phosphate having the phosphate group placed at the 6'-position.


An octadecadienoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (11E,13Z)-octadecadienoic acid.


A mannosylinositol phosphorylceramide compound having a hexacosanoyl group attached to the ceramide nitrogen, hydroxylation at C-4 of the C18 sphingoid base, and hydroxylation at C-2 and C-3 of the C26 very-long-chain fatty acid.


The S-(6-hydroxycyclohex-1-ene-1-carbonyl) derivative of coenzyme A.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (14Z,17Z,20Z,23Z,26Z,29Z)-dotriacontahexaenoic acid.


GDP-hexose

A GDP-sugar in which the sugar component is a hexosyl residue.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-phenylpropanoic acid.


A UDP-amino sugar having 4-amino-4-deoxy-beta-L-arabinopyranose as the amino sugar component.


A 2-deoxyribose bisphosphate that is 2-deoxy-alpha-D-ribofuranose 3,5-bisphosphate in which the phosphate group at position 3 is esterfied by a 2,3-dideoxy-alpha-D-ribofuranos-5-yl group.


methylbutanoyl-CoA

Any member of the class of  butanoyl-CoAs having methylbutanoyl as the acyl substituent.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxydodecanoic acid.


vamidothion

An organic thiophosphate that is N-methyl-2-[(2-sulfanylethyl)sulfanyl]propanamide in which the thiol group has been converted into the corresponding O,O-dimethyl thiophoshate. Formerly used as an insecticide and acaricide, it is no longer approved for use within the European Union.


A UDP-amino sugar having 2-acetamido-3-amino-2,3-dideoxy-alpha-D-ribo-hex-3-uloseuronic acid as the amino sugar component.


A 3-oxoacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-methylacetoacetic acid.


A dTDP-sugar having 3-amino-3,4,6-trideoxy-D-glucose as the sugar component.


The 1-O-allyl-4-phospho derivative of 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid.


sedoheptulose 7-phosphate

A ketoheptose phosphate consisting of sedoheptulose having a phosphate group at the 7-position. It is an intermediate metabolite in the pentose phosphate pathway.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3,22-dioxochol-4-en-24-oic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,10Z,13Z,16Z,19Z,22Z,25Z)-3-hydroxyoctacosahexaenoic acid.


name: E. coli strain F2513 LPS core oligosaccharide

description: A branched twelve-membered oligosaccharide phosphate consisting of three galactose residues, two glucose residues, two 3-deoxy-D-manno-oct-2-ulosonic acid residues, three L-glycero-alpha-D-manno-heptose residues and two glucosamine residues, one of which is at the reducing end. The unit constitutes one of the two core oligosaccharide structures of enterobacterial lipopolysaccharide obtained from E. coli strain F470.


A deoxyinosine phosphate compound having a diphosphate group at the 5'-position.


A hydroxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of L-erythro-3-methylmalic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,4E)-tetradecadienoic acid.


aldehydo-D-ribose 5-phosphate

The acyclic form of D-ribose 5-phosphate.


A hydroxybenzoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxylic acid group of 3-hydroxybenzoic acid.


phosphoglyceric acid

An aldonic acid phosphate where the aldonic acid component is glyceric acid.


D-galactosamine 1-phosphate

A galactosamine phosphate that is D-galactosamine substituted at position 1 by a monophosphate group.


An oxo- and hydroxy fatty acyl-CoA whose S-acyl component is derived from 3-hydroxy-5-oxohexanoic acid.


A hydroxy fatty-acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxystearic acid.


A disaccharide phosphate consisting of cellobiose having a monophosphate group at the 6'-position.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of 3-oxododecanedioic acid.


An inositol phosphoceramide in which the acyl group is hydroxylated at position 2 and one other unspecified position while the ceramide base is hydroxylated at position 4.


deoxycholoyl-CoA

A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of deoxycholic acid.


A disaccharide phosphate that is N-acetyl-6-O-phospho-beta-D-glucosamine having a beta-D-galactosyl residue attached at O-4.


FAVIPIRAVIR-RTP

A nuceloside analogue in which the nucleobase is favipiravir. It is a RNA-dependent RNA polymerase inhibitor which exhibits anti-influenza and anti-coronaviral activities.


VX nerve agent

A organic thiophosphate that is the ethyl ester of S-{2-[di(propan-2-yl)amino]ethyl} O hydrogen methylphosphonothioate. A toxic nerve agent used in chemical warfare.


methylpropanoyl-CoA

A propanoyl-CoA substituted by a methyl group on the propanoyl side chain.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,23Z,26Z,29Z,32Z,35Z)-octatriacontahexaenoic acid.


agrocin 84

A nucleotide conjugate that is produced by Agrobacterium radiobacter strain K-84. A 'Trojan horse' antibiotic used to control crown gall.


TDP-alpha-D-glucose

A TDP-sugar having alpha-D-glucose as the sugar component.


octadecadienoyl-CoA

An unsaturated fatty acyl-CoA in which the S-acyl moiety contains 18 carbons and 2 double bonds at unknown positions.


N-acylsphingosine 1-phosphoethanolamine

A ceramide phosphoethanolamine in which the sphingoid component is specified as sphing-4-enine (sphingosine).


organic diphosphate

An organic phosphate ester formed by condensation of diphosphoric acid with one or more alcohols.


A 3-oxo-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (15Z)-3-oxotetracosenoic acid.


A hexadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of hexadec-2-enoic acid.


octadecatrienoyl-CoA

An unsaturated fatty acyl-CoA in which the S-acyl moiety contains 18 carbons and 3 double bonds at unknown positions.


CMP-N,N-diacetyllegionaminic acid

A CMP-sugar having N,N-diacetyllegionaminic acid as the sugar component.


A medium-chain unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-2-undecenoic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#33.


An organic phosphoramidate that is 5'-O-[amino(3-aminopropoxy)phosphoryl]adenosine in which the nitrogen of the phosphoramidite is acylated by a (2S)-2-amino-3-carboxypropanoyl group.


polyphosphates

Any phosphate that is a salt or an ester of polyphosphoric acid or its chalcogen analogues.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,18Z,21Z,24Z,27Z,30Z,33Z)-3-hydroxyhexatriacontahexaenoic acid.


mannosylinositol phosphophytoceramide

A mannosylinositol phosphorylceramide in which the ceramide portion consists of a phytoceramide. As with other ceramide derivatives, The R substituents vary with different phytosphingoid bases and fatty acyl moieties.


A CMP-sugar having 8-amino-3,8-dideoxy-alpha-D-manno-oct-2-ulosonic acid as the sugar component.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (13Z,16Z,19Z,22Z,25Z)-octacosapentaenoic acid.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of ascr#3.


2,3,4-saturated fatty acyl CoA

A fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any 2,3,4-saturated fatty acid.


A carbohydrate sulfonate that is D-fructofuranose-1-phosphate in which the hydroxy group at at position 6 is replaced by a sulfo group.


A polysaccharide phosphate composed of a backbone of beta-D-ManNAc-(1->4)-alpha-D-Glc-(1->3)-alpha-L-Rha-1-P repeating units connected by phosphodiester linkages between position 1 of the Rha residues and position 4 of the ManNAc residues.


A branched amino tetrasaccharide and oligosaccharide phosphate comprising an N-acetyl-D-glucosamine residue, a D-glucose residue and two L-glycero-D-manno-heptose residues (one of which is phosphoethanolamine-substituted on O-3), with linkages as shown.


A ceramide phosphoethanolamine in which the sphingoid component is specified as icosasphinganine.


adenyl deoxyribonucleotide

A purine 2'-deoxyribonucleotide where the purine is adenine.


nucleotide

A nucleotide is a nucleoside phosphate resulting from the condensation of the 3 or 5 hydroxy group of a nucleoside with phosphoric acid.


UDP-glycopeptide having N-acetylmuramoyl as the glyco portion and L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine as the peptide portion (attached via an amide bond between the amino terminus and the muramoyl carboxy group).


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of ascr#1.


A ceramide phosphate that is N-acyl-15-methylhexadecasphing-4-enine bearing a single phospho substituent at position 1.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (8Z,11Z,14Z,17Z)-3-oxoicosatetraenoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z)-heptadecenoic acid.


CDP-ethanolamine

A phosphoethanolamine consisting of ethanolamine having a cytidine 5'-diphosphate moiety attached to the oxygen.


A 3-oxoacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 4-isopropenyl-2-oxocyclohexane-1-carboxylic acid.


A cis-2-enoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the enoic carboxy group of (Z)-hex-2-enedioic acid.


A hydroxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the 1-carboxy group of 2-hydroxyadipic acid.


A long-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-methylpalmitic acid,


An inositol phosphomannosylinositol phosphoceramide compound having an inositol 1-phosphoryl group linked at the 6-position to the mannose residue and a hexacosanoyl group amide-linked to a C18 sphinganine base, with no hydroxylation at C-4 of the long-chain base or on the C26 very-long-chain fatty acid.


3-formylbutyl diphosphate

An  organic phosphate that is the diphosphate formed from 3-formyl-n-butyl alcohol.


dihydrocaffeoyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of dihydrocaffeic acid.


name: phosphoric acid (1,1-dioxo-2,3-dihydrothiophen-3-yl) diphenyl ester


glycerol 3-phosphate

A glycerol monophosphate having the phosphate group located at position 1.


ceramide phosphoethanolamine (36:2)

A ceramide phosphoethanolamine in which the sphingoid base and acyl group contains a total of 36 carbon atoms and 2 double bonds.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z,12Z)-tetradecadienoic acid.


cPuMP

A nucleoside 3',5'-cyclic phosphate that is 3',5'-cyclic AMP in which the exocyclic amino group on the purine fragment is replaced by hydrogen


A UDP-sugar having 2-deoxyglucose as the sugar component.


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (22E)-3-oxochola-4,22-dien-24-oic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z)-pentadecenoic acid.


4-phospho-L-aspartic acid

The 4-phospho derivative of L-aspartic acid.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,15Z,18Z,21Z,24Z)-3-hydroxytriacontatetraenoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (9Z,12Z)-heptadecadienoic acid.


A ceramide phosphoinositol compound having a tetracosanoyl group attached to the ceramide nitrogen.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2-trans,6-cis)-dodeca-2,6-dienoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 11,12-epoxy-(5Z,8Z,14Z)-icosatrienoic acid.


itaconyl-CoA

The S-itaconyl derivative of coenzyme A.


A 3-oxo-fatty acyl-CoA obtained from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxodocosanoic acid.


GDP-alpha-D-mannose

The alpha-anomer of GDP-D-mannose.


A myo-inositol monophosphate derivative consisting of 1-O-(6-thiohexylphosphono)-D-myo-inositol having a 6-O-(2-aminoethylphosphono)-alpha-D-mannosyl-(1->2)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-(1->4)-alpha-D-glucosaminyl residue at the 6-position.


A GDP-hexose having 4-amino-4,6-dideoxy-alpha-D-mannose as the hexose fragment.


Major microspecies at pH 7.3.


inositol phosphophytoceramide (t18:0)

An inositol phosphoceramide in which a D-myo-inositol residue is linked via a phosphodiester bridge to a C18 phytoceramide moiety.


An amino pentasaccharide epitope consisting of three 3-deoxy-D-manno-oct-2-ulose residues and two N-acetylglucosamine residues (one at the reducing end) in a linear sequence, with one phosphate group attached.


CDP-D-ribulose

A CDP-sugar having D-ribulose as the sugar component with the CDP moiety attached at position 5.


A dTDP-4-amino-4,6-dideoxy-D-galactose in which the anomeric centre of the pyranose fragment has alpha-configuration.


An oxo-fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxylic acid group of 7-methyl-3-oxooctanoic acid.


O,O-DIETHYL S-HYDROGEN PHOSPHOROTHIOATE

An organic thiophosphate that is the diethyl ester of phosphorothioic O,O,O-acid.


A 2-carboxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with one of the the carboxy groups of 2-carboxyhexacosanoic acid.


hydroxy fatty acyl-CoA

A fatty-acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any hydroxy fatty acid.


A six-membered oligosaccharide phosphate antigen consisting of three 3-deoxy-D-manno-oct-2-ulose residues and two glucosamine residues (one at the reducing end) in a linear sequence, with two phosphate groups attached.


A UDP-amino sugar having 2-acetamido-4-amino-2,4,6-trideoxy-alpha-D-glucose as the sugar component.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-(3-hydroxyphenyl)propanoic acid.


An acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxylic acid group of 5-hydroxypentanoic acid.


An octadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (11E)-octadecenoic acid.


thiamine monophosphate

A thiamine phosphate that is thiamin(1+) in which the hydroxy group is replaced by a phosphate group.


1,5-dihydrocoenzyme F420

The 1,5-dihydro derivative of coenzyme F420.


name: poly(ethyl ethoxyethylene phosphate) macromolecule

description: A macromolecule composed of repeating ethyl (2-hydroxyethyl) phosphonate units.


A mannosylinositol phosphorylceramide compound having a tetracosanoyl group amide-linked to a C20 sphinganine base, with hydroxylation at C-2 of the C24 very-long-chain fatty acid.


benzoyl-CoA

The simplest member of the class of  benzoyl-CoAs that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of benzoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,12Z,15Z,18Z,21Z,24Z,27Z)-triacontaheptaenoic acid.


A dTDP-sugar having 2,3,6-trideoxy-3-C-methyl-4-O-methyl-3-nitroso-beta-L-arabino-hexopyranose as the sugar component.


pCpC

A 5'-phospho-(3'->5')-dinucleotide composed from two CMP residues.


coenzyme alpha-F420-3

The amide obtained by formal condensation of the carboxylic acid group of F420-0 with the amino group of L-gamma-glutamyl-L-gamma-glutamyl-L-glutamic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,21Z,24Z,27Z,30Z,33Z)-hexatriacontahexaenoic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#36.


A member of the class of methanopterins resulting from the formal hydrogenation at the 7 and 8 positions of methanopterin.


ATPGAMMAS

A nucleoside triphosphate analogue that is ATP in which one of the oxygens attached to 3-phosphate group is replaced by sulfur.


A dTDP-sugar having 3-amino-3,4,6-trideoxy-alpha-D-glucose as the sugar component.


An inositol phosphomannosylinositol phosphophytoceramide in which the phytoceramide fragment contains 18 carbons.


An octadecenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of trans-2-octadecenoic acid.


EDIFENPHOS

An organic thiophosphate that is the O-ethyl-S,S-diphenyl ester of phosphorodithioic acid.  Used to control a variety of fungal diseases on rice including blast, ear blight and stem rot. Edifenphos is moderately toxic to mammals and fish but poses more of a risk to aquatic invertebrates.


DIAZOXON

An  organic phosphate that is diethyl hydrogen phosphate in which the hydrogen of the hydroxy group has been replaced by a 6-methyl-2-(propan-2-yl)pyrimidin-4-yl group. It is a metabolite of the pesticide diazinon.


A phosphate-linked oligosaccharide analogue consisting of two 3(4)-O-acetyl-alpha-N-acetyl-D-mannosaminyl residues, joined by a (1->6)-phosphodiester linkage. It is a constituent 2-repeating-unit fragment of Neisseria meningitidis serogroup A capsular polysaccharide (MenA), the structural diagram of which shows hydroxy groups partly acetylated at either positions 3 or 4, along with parts of phosphodiester linkages which are present at both the reducing and non-reducing ends of the disaccharide unit.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxy-7-methoxy-5-methyl-1-naphthoic acid.


(KDO)3-lipid IVA

Lipid IVA glycosylated with three 3-deoxy-D-manno-octulosonic acid (KDO) residues.


name: cytidine 5'-phosphate 2',3'-cyclic phosphate

description: A 2',3'-cyclic pyrimidine nucleotide that is CMP in which the hydroxy groups at the 2' and 3' positions have been converted into the corresponding cyclic phosphate.


An unsaturated fatty acyl-CoA resulting from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3E,5Z)-tetradecadienoic acid.


An alkynic fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 9-octadecynoic acid.


An N-glycosyl compound that consists of 5,6-diaminouracil in which one of the hydrogens on the 6-amino function is substituted by a 5-phospho-beta-D-ribosyl residue.


3-substituted propionyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any 3-substituted propionic acid (R =/= H).


A trans-3-enoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoic acid.


A ketoaldonic acid phosphate consisting of (2xi)-3-deoxy-beta-D-threo-hept-6-ulopyranosonic acid carrying a single phospho substituent at position 7.


L-serine phosphoethanolamine

The L-enantiomer of serine phosphoethanolamine.


An omega-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (11Z)-18-hydroxyoctadecenoic acid.


An S-acyl-4'-phosphopantetheine obtained by formal condensation of the thiol group of D-pantetheine 4'-phosphate with the carboxy group of tetradecanoic acid.


trans-feruloylacetyl-CoA

A feruloylacetyl-CoA in which the double bond of the feruloyl group has trans configuration.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-aminobenzoylacetic acid.


An alpha,omega-dicarboxylic acid and phosphate monoester that is adipic acid with a phosphate group at position 4 and hydroxy groups at positions 2, 3, and 5.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (5Z,11Z,14Z,17Z)-icosatetraenoic acid.


An acyl-CoA having 2-furoyl as the S-acyl group.


S. aureus (beta-1,4)-GlcNAc WTA-trimer

A Staphylococcus aureus wall technoic acid (WTA) fragment consisting of a chain of three ribitol 5-phosphate (RboP) residues modified with a beta-D-GlcNAc residue linked to C-4 of the central RboP residue.


MECARBAM

An organic thiophosphate that is O,O-diethyl hydrogen phosphorodithioate in which the hydrogen attached to a sulfur is replaced by a 2-[(ethoxycarbonyl)(methyl)amino]-2-oxoethyl group.


phenylacetyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of phenylacetic acid.


A ceramide phosphoethanolamine in which the sphingoid component is specified as C14 sphingosine.


D-erythritol 4-phosphate

A tetritol phosphate consisting of D-erythritol having the phosphate at the 4-position.


A cholestenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (25S)-3beta-hydroxy-5-cholesten-26-oic acid.


A mannosylated ceramide phosphoinositol compound having a tetracosanoyl group attached to the ceramide nitrogen, with hydroxylation at C-2 of the very-long-chain fatty acid.


steroidal acyl-CoA

An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any steroidal carboxylic acid.


A long-chain fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-methylundecanoic acid.


dTDP-alpha-D-fucose

A dTDP-D-fucose in which the anomeric centre of the fucose fragment has alpha-configuration.


An L-lysine derivative that is the phosphoramidate obtained by formal condensation of the phosphate group of AMP with the side-chain amino group of L-lysine.


D-ribose 1-phosphate

A ribose monophosphate that is D-ribose substituted at position 1 by a phosphate group.


An L-lysine derivative arising from reductive alkylation of the N(2)-position of L-lysine by pyridoxal-5-phosphate.


An octadecadienoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,9E)-octadecadienoic acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#35.


A tetrahydropterin that is the O-diphospho derivative of 2-amino-4-oxo-6-hydroxymethyl-3,4,7,8-tetrahydropterin.


A dTDP-sugar having 4-dehydro-3-methyl-2,6-dideoxy-beta-L-glucose as the sugar component.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (19Z,22Z,25Z,28Z,31Z)-3-oxotetratriacontapentaenoic acid.


A mannosylinositol phosphorylceramide compound having a hexaacosanoyl group amide-linked to a C18 phytosphingosine base, with no hydroxylation of the C26 very long chain fatty acid.


A cholestenoyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (25S)-3-oxocholest-4-en-26-oic acid.


A glycoside phosphate comprising D-ribitol-5-phosphate having a beta-D-ribosyl residue attached at the 1-position.


A synthetic disaccharide phosphate consisting of an alpha-D-GlcNAc-(1->3)-alpha-D-GlcNAc disaccharide linked glycosidically to O-2 of D-glyceric acid and connected to a 5-aminopentyl linker via a phospho group at O-6 of the reducing-end residue. Synthesized for immobilization on microarray surfaces and conjugation to carrier proteins as a potential vaccine candidate to protect from Clostridium difficile infections.


The pyranose form of D-glucosamine 6-phosphate.


5-phospho-D-xylonic acid

An aldonic acid phosphate that is D-xylonic acid carrying a single phosphate group at the 5-position.


S. aureus (beta-1,3)-GlcNAc WTA-trimer

A Staphylococcus aureus wall technoic acid (WTA) fragment consisting of a chain of three ribitol 5-phosphate (RboP) residues modified with a beta-D-GlcNAc residue linked to C-3 of the central RboP residue.


TRIMETHYL PHOSPHATE

A trialkyl phosphate that is the trimethyl ester of phosphoric acid.


An oxo fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxylic acid group of (15Z)-12-oxophyto-10,15-dienoic acid.


omega-hydroxy fatty acyl-CoA

A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any omega-hydroxy fatty acid.


A UDP-glycopeptide in which the glycopeptide component consists of N(6)-(N-acetyl-alpha-D-muramoyl-L-alanyl-D-gamma-glutamyl)-D-lysine, joined to UDP via a glycosyl diphosphate bond.


A CMP-sugar having 3-deoxy-beta-D-manno-octulosonic acid as the sugar component.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-hydroxyisovaleric acid.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#20.


foscarbidopa

An L-tyrosine derivative that is carbidopa in which the hydroxy group at position 4' is replaced by a phosphonooxy group. It is a water-soluble prodrug of carbidopa which is used for the treatment of Parkinson's disease.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,8Z,11Z,14Z,17Z,20Z,23Z)-hexacosaheptaenoic acid.


A lipid A where the free primary hydroxy group of lipid A has a branched hexasaccharide attached.


2-phosphoglyceric acid

A monophosphoglyceric acid having the phospho group at the 2-position.


A mannosylated ceramide phosphoinositol compound having a hexacosanoyl group attached to the ceramide nitrogen, with no hydroxylation at C-4 of the long-chain base or on the very-long-chain fatty acid.


lipid A 1-(2-aminoethyl diphosphate)

A member of the class of lipid As in which the anomeric phosphate group of lipid A is replaced by 2-aminoethyl diphosphate.


An aldooctose phosphate that is the 5-O-phosphono derivative of 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid


The L-glutamide of 5,6,7,8-tetrahydromethanopterin.


dodecenoyl-CoA

A monounsaturated fatty acyl-CoA in which the S-acyl moiety contains 12 carbons and 1 double bond.


hexanoyl-CoA

A medium-chain fatty acyl-CoA having hexanoyl as the S-acyl group.


N-acetyl-D-mannosamine 6-phosphate

An N-acyl-D-mannosamine 6-phosphate having the N-acyl specified as acetyl.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (8Z,11Z,14Z,17Z,20Z,23Z)-hexacosahexaenoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (17Z,20Z,23Z,26Z,29Z)-3-oxodotriacontapentaenoic acid.


A branched oligosaccharide phosphate comprising a D-galactose residue, a D-glucose residue, an N-acetyl-D-glucosamine residue, two L-glycero-D-manno-heptose residues (one of which is phosphoethanolamine-substituted on O-3), with linkages as shown and with a 3-deoxy-D-manno-oct-2-ulosonic acid (2-keto-3-deoxy-D-mannooctanoic acid, Kdo) residue at the reducing end. Corresponds to the lgtA mutant of the core oligosaccharide of Neisseria meningitidis.


diadenosyl polyphosphate

A dinucleotide that consists of two adenosine moieties bridge by a chain of a variable number (from two to six) of phosphate units.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#23.


An inositol phosphomannosylinositol phosphoceramide compound having an inositol 1-phosphoryl group linked to the mannose residue (at the 6-position) and a tetracosanoyl group amide-linked to a C20 phytosphingosine base, with hydroxylation at C-2 of the C24 very-long-chain fatty acid.


A myo-inositol monophosphate derivative that is 1D-myo-inositol substituted at position 1 by an sn-glycero-3-phospho group.


lipid IVB

A member of the class of lipid As that is lipid IVA in which one of the free OH groups on the two N-hydroxytetradecanoyl groups is carrying a palimitoyl group.


A nine-membered branched glucosamine oligosaccharide made up from five glucose, two Kdo and two glucosamine residues bearing two phospho substituents. Corresponds to a truncated inner core part of Moraxella catarrhalis lipopolysaccharide (LPS).


A steroidal acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-oxochola-4,22-dien-24-oic acid.


A phosphate-linked oligosaccharide analogue consisting of six 3(4)-O-acetyl-alpha-N-acetyl-D-mannosaminyl residues, joined by (1->6)-phosphodiester linkages. It is a constituent 6-repeating-unit segment of Neisseria meningitidis serogroup A capsular polysaccharide (MenA), the structural diagram of which shows hydroxy groups partly acetylated at either positions 3 or 4, along with parts of phosphodiester linkages which are present at both the reducing and non-reducing ends of the hexasaccharide unit.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxy-3-methylnonanoic acid.


A N-acyltetradecasphingosine-1-phosphoethanolamine in which the acyl group specified is heneicosanoyl.


name: E. coli strain F653 LPS core oligosaccharide 1

description: A branched twelve-membered oligosaccharide phosphate consisting of one galactose residue, three glucose residues, two 3-deoxy-D-manno-oct-2-ulosonic acid residues, three L-glycero-alpha-D-manno-heptose residues and three glucosamine residues, one of which is at the reducing end. The unit constitutes one of the two core oligosaccharide structures of enterobacterial lipopolysaccharide obtained from E. coli strain F653.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 8,9-epoxy-(5Z,11Z,14Z)-icosatrienoic acid.


acetyl CoA

An acyl-CoA having acetyl as its S-acetyl component.


An acyl-CoA thioester that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 3-hydroxy-3-(methylthio)propanoic acid.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,16Z,19Z,22Z,25Z,28Z,31Z)-tetratriacontaheptaenoic acid.


D-xylose 5-phosphate

A xylose phosphate that is D-xylose carrying a phosphate group at position 5.


C20 sphinganine 1-phosphate

The phosphosphingolipid that is the phosphate ester of C20 sphinganine.


A 2-acetamido-2-deoxy-D-glucopyranose 1-phosphate having alpha-configuration at the anomeric centre.


An acyl-CoA that is the S-(5-hydroxythiophene-2-carbonyl) derivative of coenzyme A.


dTDP-alpha-D-desosamine

A dTDP-sugar having 3-dimethylamino-3,4,6-trideoxy-alpha-D-glucose (alpha-D-desosamine) as the sugar component.


isopentenyl-UTP

An organic triphosphate formed by condensation between the gamma-phospho group of uridine 5'-triphosphate and isopentenyl alcohol.


AcNADH

A dinucleotide that is NADH with the amide group om the nictotinamide ring replaced with an acetyl group.


inorganic phosphate

Any  phosphate that contains no carbon atom.


N-acyl-D-glucosamine 6-phosphate

An N-acyl-D-glucosamine phosphate having the phosphate group placed at the 6-position.


A 3-hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (3R,11Z,14Z)-3-hydroxyicosadienoic acid.


A hydroxy fatty-acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of 2-hydroxydodecanoic acid.


PIRIMIPHOS METHYL

An  organic thiophosphate that is O,O-dimethyl O-pyrimidin-4-yl phosphorothioate substituted by a methyl group at position 6 and a diethylamino group at position 2.


coenzyme A

A thiol comprising a panthothenate unit in phosphoric anhydride linkage with a 3',5'-adenosine diphosphate unit; and an aminoethanethiol unit.


An unsaturated fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (2E,8Z,11Z,14Z,17Z)-icosapentaenoic acid.


short-chain fatty acyl-CoA

A fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any short-chain fatty acid.


An N-acylsphinganine-1-phosphoethanolamine in which the N-acyl group is specified as hexadecanoyl.


uridine bisphosphate

A  ribonucleoside bisphosphate having uracil as the nucleobase.


An acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of oscr#28.


sphingosine 1-phosphate

A phosphosphingolipid that consists of sphingosine having a phospho group attached at position 1


carbovir monophosphate

The organic phosphate that is the 5'-monophosphate of (-)-carbovir.


A hydroxy fatty acyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-2-hydroxybutanoic acid


A organic phosphoramidate that is guanosine 5'-monophosphate in which one of the hydroxy groups of the phosphate has been condensed with the side chain amino group of N(alpha)-acetyl-L-lysine methyl ester.


An AMP-sugar in which the 2'-hydroxy group of AMP carries a 5-phospho-beta-D-ribosyl substituent. Monomer unit of poly(ADP-Rib) [poly(adenosine diphosphate ribose)].


bis(5'-nucleosidyl) oliogophosphate

A nucleotide in which two nucleosides are joined together through their 5' carbons by a chain of phosphate molecules.


An inositol phosphomannosylinositol phosphoceramide compound having a hexacosanoyl group attached to the ceramide nitrogen.


An NADP obtained by formal reduction of the 1,6-position in the pyridine ring of beta-NADP.


C30 phosphomycoketide

A phospholipid that is the 4,8,12,16,20-pentamethylpentacosyl ester of phosphoric acid.


TRIETHYL PHOSPHATE

A trialkyl phosphate that is the triethy ester derivative of  phosphoric acid.


A ribose bisphosphate that consists of D-ribose having two monophosphate groups at the 2- and 5-positions.