name: regulation of cell-substrate junction assembly

description: Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.


COPII-coated vesicle cargo loading

category: biolink:BiologicalProcess biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.


regulation of COPII vesicle uncoating

description: Any process that modulates the frequency, rate or extent of COPII vesicle uncoating, the process in which COPII vesicle coat proteins are disassembled, and released.


COPII vesicle uncoating

description: The process in which COPII vesicle coat proteins are disassembled, and released.


COPII-coated vesicle budding

description: The evagination of an endoplasmic reticulum membrane, resulting in formation of a COPII-coated vesicle.


name: endosome to lysosome transport of low-density lipoprotein particle

description: The directed movement of low-density lipoprotein particle from endosomes to lysosomes.


name: receptor-mediated endocytosis involved in cholesterol transport

description: A receptor-mediated endocytosis process involved in intracellular cholesterol transport.


vesicle-mediated cholesterol transport

description: The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, by membrane-bounded vesicles.


lysosome to ER cholesterol transport

description: The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, from the lysosome to the endoplasmic reticulum.


name: low-density lipoprotein particle disassembly involved in cholesterol transport

description: The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.


name: cholesterol ester hydrolysis involved in cholesterol transport

description: The cholesterol metabolic process in which cholesterol esters are hydrolyzed into free fatty acids and cholesterol in the lysosome that contributes to intracellular cholesterol transport.


lysosomal glycocalyx

category: biolink:CellularComponent biolink:AnatomicalEntity biolink:PhysicalEssence biolink:OrganismalEntity biolink:SubjectOfInvestigation biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The polysaccharide-based coating on the inner side of a lysosomal membrane. It may be involved in protecting the membrane from digestion by lysosomal enzymes.


name: cell-cell adhesion involved in synapse maturation

description: The attachment of the pre-synaptic cell to the post-synaptic cell via adhesion molecules that contributes to synapse maturation.


name: protein-containing complex assembly involved in synapse maturation

description: The aggregation, arrangement and bonding together of a set of components to form a protein complex that contributes to synapse maturation.


name: positive regulation of synapse maturation by synaptic transmission

description: Any process that increases the extent of synaptic maturation as a result of the communication from a pre-synaptic cell to a post-synaptic cell across a synapse.


regulation of synapse maturation

description: Any process that modulates the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.


name: positive regulation of synapse maturation

description: Any process that increases the extent of synapse maturation, the process that organizes a synapse so that it attains its fully functional state.


tissue migration

description: The process in which the population of cells that make up a tissue undergo directed movement.


mesenchyme migration

description: The process in which the population of cells that make up a mesenchyme undergo directed movement.


epithelium migration

description: The process in which the population of cells that make up an epithelium undergo directed movement.


mesendoderm migration

description: The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm.


name: cell migration involved in mesendoderm migration

description: The orderly movement of epithelial cells from one site to another that contributes to the migration of mesendodermal tissue.


actin filament branching

description: The formation of daughter actin filament branches at an angle on the sides of preexisting mother filaments.


epithelial cell-cell adhesion

description: The attachment of an epithelial cell to another epithelial cell via adhesion molecules.


name: epithelial cell-cell adhesion involved in epithelium migration

description: The attachment of an epithelial cell to another epithelial cell via adhesion molecules that contributes to epithelium migration.


name: regulation of actin cytoskeleton organization by cell-cell adhesion

description: Any cell-cell adhesion process that modulates the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.


mitochondrial chromosome packaging

description: A process in which mitochondrial chromosomal DNA and associated proteins organize into a compact, orderly structure.


regulation of mitochondrial fission

description: Any process that modulates the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.


name: positive regulation of mitochondrial fission

description: Any process that increases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.


nucleoid organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nucleoid. The nucleoid is the region of a bacterial cell, virion, mitochondrion or chloroplast to which the DNA is confined.


mitochondrial nucleoid organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid. The mitochondrial nucleoid is the region of a mitochondrion to which the DNA is confined.


membrane fission

description: A process that is carried out at the cellular level which results in the separation of a single continuous membrane into two membranes.


mitochondrial membrane fission

description: A process that is carried out at the cellular level which results in the separation of a single continuous mitochondrial membrane into two membranes and contributes to mitochondrial fission.


name: establishment of protein localization to membrane

description: The directed movement of a protein to a specific location in a membrane.


name: establishment of protein localization to mitochondrial membrane

description: The directed movement of a protein to a specific location in the mitochondrial membrane.


name: establishment of protein localization to mitochondrial membrane involved in mitochondrial fission

description: The directed movement of a protein to a specific location in the mitochondrial membrane that contributes to mitochondrial fission.


name: regulation of sphingolipid biosynthetic process

description: Any process that modulates the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).


name: positive regulation of sphingolipid biosynthetic process

description: Any process that increases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).


name: negative regulation of sphingolipid biosynthetic process

description: Any process that decreases the rate, frequency or extent of sphingolipid biosynthesis. Sphingolipid biosynthesis is the chemical reactions and pathways resulting in the formation of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).


intracellular sphingolipid homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of sphingolipids within a cell.


name: endoplasmic reticulum membrane organization

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an endoplasmic reticulum membrane.


name: sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization

description: The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.


Golgi to lysosome transport

description: The directed movement of substances from the Golgi to lysosomes.


Golgi ribbon formation

description: The formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae.


name: establishment of epithelial cell polarity

description: The specification and formation of anisotropic intracellular organization of an epithelial cell.


name: establishment of epithelial cell planar polarity

description: The specification and formation of the polarity of an epithelial cell along the plane of the epithelial tissue.


asymmetric Golgi ribbon formation

description: The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that contributes to the establishment of epithelial cell polarity.


name: regulation of secretion by asymmetric Golgi ribbon formation

description: The asymmetric formation of a continuous ribbon of interconnected Golgi stacks of flat cisternae that modulates the controlled release of a substance from a polarized epithelial cell.


Golgi disassembly

description: A cellular process that results in the breakdown of a Golgi apparatus that contributes to Golgi inheritance.


Golgi distribution to daughter cells

description: Any process in which disassembled Golgi vesicles are localized into daughter cells upon cell division.


Golgi reassembly

description: The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance.


regulation of spindle assembly

description: Any process that modulates the rate, frequency or extent of spindle assembly. Spindle assembly is the aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.


regulation of Golgi inheritance

description: Any process that modulates the rate, frequency or extent of Golgi inheritance. Golgi inheritance is the partitioning of Golgi apparatus between daughter cells at cell division.


chondrocyte morphogenesis

description: The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte.


name: regulation of synaptonemal complex assembly

description: Any process that modulates the frequency, rate or extent of synaptonemal complex assembly. Synaptonemal complex assembly is the cell cycle process in which the synaptonemal complex, a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination, is formed.


organelle membrane fusion

description: The joining of two lipid bilayers to form a single organelle membrane.


name: regulation of establishment of planar polarity

description: Any process that modulates the rate, frequency or extent of the establishment of planar polarity, the coordinated organization of groups of cells in a tissue, such that they all orient to similar coordinates.


name: microtubule cytoskeleton organization involved in establishment of planar polarity

description: A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.


name: establishment of planar polarity involved in neural tube closure

description: Coordinated organization of groups of cells in the plane of an epithelium that contributes to the closure of the neural tube.


name: regulation of establishment of planar polarity involved in neural tube closure

description: Any process that modulates the rate, frequency, or extent of the establishment of planar polarity involved in neural tube closure, the coordinated organization of groups of cells in the plane of an epithelium that contributes to the closure of the neural tube.


name: planar cell polarity pathway involved in neural tube closure

category: biolink:Pathway biolink:OntologyClass biolink:BiologicalProcess biolink:Occurrent biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors that modulates the establishment of planar polarity contributing to neural tube closure.


name: positive regulation of thiamine biosynthetic process

description: Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.


name: regulation of cholesterol metabolic process

description: Any process that modulates the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.


name: regulation of secretion of lysosomal enzymes

description: Any process that modulates the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.


regulation of kidney development

description: Any process that modulates the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.


name: positive regulation of kidney development

description: Any process that increases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.


name: negative regulation of kidney development

description: Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.


name: regulation of pancreatic juice secretion

description: Any process that modulates the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.


name: positive regulation of pancreatic juice secretion

description: Any process that increases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.


name: negative regulation of pancreatic juice secretion

description: Any process that decreases the rate, frequency or extent of pancreatic juice secretion, the regulated release of pancreatic juice by the exocrine pancreas into the upper part of the intestine.


name: regulation of branching involved in ureteric bud morphogenesis

description: Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.


name: positive regulation of branching involved in ureteric bud morphogenesis

description: Any process that increases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.


name: negative regulation of branching involved in ureteric bud morphogenesis

description: Any process that decreases the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.


regulation of glomerulus development

description: Any process that modulates the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.


name: positive regulation of glomerulus development

description: Any process that increases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.


name: negative regulation of glomerulus development

description: Any process that decreases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.


name: regulation of release of cytochrome c from mitochondria

description: Any process that modulates the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.


name: positive regulation of release of cytochrome c from mitochondria

description: Any process that increases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.


name: negative regulation of release of cytochrome c from mitochondria

description: Any process that decreases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.


protein localization to nuclear pore

description: A process in which a protein is transported to, or maintained in, a nuclear pore.


name: positive regulation of cholesterol metabolic process

description: Any process that increases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.


name: negative regulation of cholesterol metabolic process

description: Any process that decreases the rate, frequency, or extent of cholesterol metabolism, the chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones.


name: regulation of triglyceride metabolic process

description: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.


name: positive regulation of triglyceride metabolic process

description: Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.


name: negative regulation of triglyceride metabolic process

description: Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.


name: regulation of establishment of blood-brain barrier

description: Any process that modulates the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.


name: positive regulation of establishment of blood-brain barrier

description: Any process that increases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.


name: negative regulation of establishment of blood-brain barrier

description: Any process that decreases the rate, frequency or extent of the establishment of the blood-brain barrier, a selectively permeable structural and functional barrier that exists between the capillaries and the brain.


regulation of radial pattern formation

description: Any process that modulates the rate, frequency or extent of radial pattern formation, the regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.


name: spongiotrophoblast layer developmental growth

description: The increase in size or mass of the spongiotrophoblast layer of the placenta where the increase in size or mass contributes to the progression of that layer over time from its formation to its mature state.


name: positive regulation of lipid kinase activity

description: Any process that increases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.


name: negative regulation of lipid kinase activity

description: Any process that decreases the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.


name: chromosome localization to nuclear envelope involved in homologous chromosome segregation

description: The directed movement of a chromosome to the nuclear envelope that contributes to homologous chromosome segregation and precedes synapsis.


name: mitotic spindle-templated microtubule nucleation

description: The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from within the mitotic spindle.


description: The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from the centrosome.


description: The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates from chromatin.


regulation of spindle organization

description: Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.


name: regulation of red or far-red light signaling pathway

description: Any process that modulates the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.


name: positive regulation of red or far-red light signaling pathway

description: Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.


name: negative regulation of red or far-red light signaling pathway

description: Any process that decreases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.


name: regulation of centromere complex assembly

description: Any process that modulates the rate, frequency, or extent of centromere complex assembly, the aggregation, arrangement and bonding together of proteins and centromeric DNA molecules to form a centromeric protein-DNA complex.


regulation of spindle checkpoint

description: Any process that modulates the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.


name: positive regulation of spindle checkpoint

description: Any process that increases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.


name: negative regulation of spindle checkpoint

description: Any process that decreases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.


regulation of kinetochore assembly

description: Any process that modulates the rate, frequency, or extent of kinetochore assembly, the aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.


name: regulation of metaphase plate congression

description: Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.


name: regulation of arachidonic acid secretion

description: Any process that modulates the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.


name: positive regulation of arachidonic acid secretion

description: Any process that increases the rate, frequency, or extent of arachidonic acid secretion, the controlled release of arachidonic acid from a cell or a tissue.


name: fibroblast growth factor receptor signaling pathway involved in somitogenesis

description: The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to somitogenesis.


name: Wnt signaling pathway involved in somitogenesis

description: The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.


name: axis elongation involved in somitogenesis

description: The developmental growth that results in the elongation of the rostral-caudal axis that contributes to somitogenesis.


name: convergent extension involved in somitogenesis

description: The morphogenetic process in which a presomitic mesoderm narrows along the left-right axis and lengthens in the rostral-caudal axis contributing to somitogenesis.


name: cell migration involved in somitogenic axis elongation

description: Any process involved in the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.


name: regulation of cell migration involved in somitogenic axis elongation

description: Any process that modulates the frequency, rate, or extent of the controlled self-propelled movement of a cell that contributes to somitogenic axis elongation.


name: cell-cell adhesion involved in establishment of planar polarity

description: The attachment of one cell to another cell via adhesion molecules that contributes to the establishment of planar cell polarity.


name: protein localization involved in establishment of planar polarity

description: Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity.


name: epithelium migration involved in imaginal disc-derived wing morphogenesis

description: The process in which the population of cells that make up a wing epithelium undergo directed movement and contribute to imaginal disc-derived morphogenesis.


name: convergent extension involved in imaginal disc-derived wing morphogenesis

description: The morphogenetic process in which the wing epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to imaginal disc-derived wing morphogenesis.


name: cell elongation involved in imaginal disc-derived wing morphogenesis

description: The process in which a cell elongates and contributes to imaginal disc-derived wing morphogenesis.


name: cell proliferation involved in imaginal disc-derived wing morphogenesis

description: The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.


name: regulation of cell proliferation involved in imaginal disc-derived wing morphogenesis

description: Any process that modulates the frequency, rate, or extent of the multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.


regulation of muscle system process

description: Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system.


name: negative regulation of mitochondrial fission

description: Any process that decreases the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.


name: regulation of retinal ganglion cell axon guidance

description: Any process that modulates the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.


name: negative regulation of retinal ganglion cell axon guidance

description: Any process that decreases the frequency, rate, or extent of retinal ganglion cell axon guidance, the process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.


name: positive regulation of inclusion body assembly

description: Any process that increases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.


name: regulation of transcription-coupled nucleotide-excision repair

description: Any process that modulates the frequency, rate, or extent of the nucleotide-excision repair process that carries out preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the global genome nucleotide excision repair pathway.


name: positive regulation of canonical Wnt signaling pathway

description: Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.


name: regulation of immune complex clearance by monocytes and macrophages

description: Any process that modulates the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages.


name: positive regulation of immune complex clearance by monocytes and macrophages

description: Any process that increases the rate, frequency, or extent of the process of immune complex clearance by monocytes or macrophages.


name: regulation of mitotic cell cycle spindle assembly checkpoint

description: Any process that modulates the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.


name: positive regulation of mitotic cell cycle spindle assembly checkpoint

description: Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.


name: activation of mitotic cell cycle spindle assembly checkpoint

description: Any process that starts the inactive process of a mitotic cell cycle spindle assembly checkpoint.


fibroblast growth factor production

description: The appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: regulation of fibroblast growth factor production

description: Any process that modulates the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: positive regulation of fibroblast growth factor production

description: Any process that increases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: negative regulation of fibroblast growth factor production

description: Any process that decreases the rate, frequency or extent of the appearance of a fibroblast growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


regulation of somatostatin secretion

description: Any process that modulates the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.


name: positive regulation of somatostatin secretion

description: Any process that increases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.


name: negative regulation of somatostatin secretion

description: Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.


regulation of peptide hormone secretion

description: Any process that modulates the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules.


name: positive regulation of peptide hormone secretion

description: Any process that increases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules.


name: negative regulation of peptide hormone secretion

description: Any process that decreases the rate, frequency, or extent of the regulated release of a peptide hormone from secretory granules.


regulation of calcium ion import

description: Any process that modulates the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.


name: positive regulation of calcium ion import

description: Any process that increases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.


name: negative regulation of calcium ion import

description: Any process that decreases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.


name: regulation of cellular response to growth factor stimulus

description: Any process that modulates the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.


name: negative regulation of cellular response to growth factor stimulus

description: Any process that decreases the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.


regulation of osteoclast proliferation

description: Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.


name: positive regulation of osteoclast proliferation

description: Any process that increases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.


name: negative regulation of osteoclast proliferation

description: Any process that decreases the rate, frequency, or extent of the multiplication or reproduction of osteoclasts, resulting in the expansion of an osteoclast cell population.


name: nuclear matrix anchoring at nuclear membrane

description: The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.


name: nitrogen catabolite regulation of transcription

description: A transcription regulation process in which the presence of one nitrogen source leads to the modulation of the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.


name: nitrogen catabolite activation of transcription

description: A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.


name: nitrogen catabolite repression of transcription

description: A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other nitrogen sources.


name: regulation of mitochondrial DNA replication

description: Any process that modulates the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.


name: positive regulation of mitochondrial DNA replication

description: Any process that increases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.


name: negative regulation of mitochondrial DNA replication

description: Any process that decreases the rate, frequency or extent of the process in which new strands of DNA are synthesized in the mitochondrion.


regulation of neural crest formation

description: Any process that modulates the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.


name: positive regulation of neural crest formation

description: Any process that increases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.


name: negative regulation of neural crest formation

description: Any process that decreases the rate, frequency, or extent of neural crest formation. Neural crest formation is the formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.


positive regulation of wound healing

description: Any process that increases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.


nucleic acid metabolic process

description: Any cellular metabolic process involving nucleic acids.


meiotic spindle assembly

description: The aggregation, arrangement and bonding together of a set of components to form the spindle that contributes to the process of meiosis.


mitotic spindle assembly

description: Mitotic bipolar spindle assembly begins with spindle microtubule nucleation from the separated spindle pole body, includes spindle elongation during prometaphase, and is complete when all kinetochores are stably attached the spindle, and the spindle assembly checkpoint is satisfied.


name: regulation of DNA methylation-dependent heterochromatin formation

description: Any process that modulates the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.


name: positive regulation of DNA methylation-dependent heterochromatin formation

description: Any process that increases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.


name: negative regulation of DNA methylation-dependent heterochromatin formation

description: Any process that decreases the rate, frequency, or extent of DNA methylation-dependent heterochromatin formation.


regulation of protein deacetylation

description: Any process that modulates the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.


name: positive regulation of protein deacetylation

description: Any process that increases the rate, frequency, or extent of protein deacetylation, the removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.


name: regulation of protein targeting to membrane

description: Any process that modulates the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.


name: positive regulation of protein targeting to membrane

description: Any process that increases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.


name: negative regulation of protein targeting to membrane

description: Any process that decreases the frequency, rate or extent of the process of directing proteins towards a membrane, usually using signals contained within the protein.


name: positive regulation of intracellular protein transport

description: Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells.


name: negative regulation of intracellular protein transport

description: Any process that decreases the frequency, rate or extent of the directed movement of proteins within cells.


regulation of chylomicron remodeling

description: Any process that modulates the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.


name: positive regulation of chylomicron remodeling

description: Any process that increases the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.


name: regulation of chylomicron remnant clearance

description: Any process that modulates the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.


name: positive regulation of chylomicron remnant clearance

description: Any process that increases the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.


name: regulation of superoxide metabolic process

description: Any process that modulates the rate, frequency, or extent of superoxide metabolism, the chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.


name: prostaglandin secretion involved in immune response

description: The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring.


name: negative regulation of oxidative phosphorylation

description: Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.


name: regulation of locomotion involved in locomotory behavior

description: Any process that modulates the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.


name: positive regulation of locomotion involved in locomotory behavior

description: Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.


name: negative regulation of locomotion involved in locomotory behavior

description: Any process that decreases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.


regulation of olfactory learning

description: Any process that modulates the rate, frequency, or extent of olfactory learning. Olfactory learning is any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.


name: regulation of DNA-templated DNA replication

description: Any process that modulates the rate, frequency, or extent of DNA-templated DNA replication, the process in which new strands of DNA are synthesized.


regulation of platelet aggregation

description: Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.


name: negative regulation of platelet aggregation

description: Any process that decreases the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.


stomatal closure

description: The process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.


regulation of stomatal closure

description: Any process that modulates the rate, frequency, or extent of stomatal closure. Stomatal closure is the process of closing of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.


name: regulation of cell wall (1->3)-beta-D-glucan biosynthetic process

description: Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.


name: regulation of brown fat cell differentiation

description: Any process that modulates the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.


name: positive regulation of brown fat cell differentiation

description: Any process that increases the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.


name: regulation of formin-nucleated actin cable assembly

description: Any process that modulates the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.


name: positive regulation of formin-nucleated actin cable assembly

description: Any process that increases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.


name: negative regulation of formin-nucleated actin cable assembly

description: Any process that decreases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.


name: positive regulation of secretion of lysosomal enzymes

description: Any process that increases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.


name: negative regulation of secretion of lysosomal enzymes

description: Any process that decreases the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.


name: cellular organohalogen metabolic process

description: The chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.


name: cellular organofluorine metabolic process

description: The chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.


name: regulation of cellular organohalogen metabolic process

description: Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.


name: regulation of cellular organofluorine metabolic process

description: Any process that modulates the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.


name: negative regulation of cellular organohalogen metabolic process

description: Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.


name: negative regulation of cellular organofluorine metabolic process

description: Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organofluorine compounds, as carried out by individual cells.


seedling development

description: The process whose specific outcome is the progression of the seedling over time, beginning with seed germination and ending when the first adult leaves emerge.


regulation of nitrate assimilation

description: Any process that modulates the rate, frequency, or extent of the uptake, from the environment, of nitrates, inorganic or organic salts and esters of nitric acid and the subsequent reduction of nitrate ion to other, less highly oxidized, inorganic nitrogenous substances.


polygalacturonase inhibitor activity

category: biolink:MolecularActivity biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: Binds to and stops, prevents or reduces the activity of polygalacturonase.


regulation of auxin metabolic process

description: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.


name: positive regulation of auxin metabolic process

description: Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.


name: negative regulation of auxin metabolic process

description: Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.


name: regulation of tryptophan metabolic process

description: Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.


name: positive regulation of tryptophan metabolic process

description: Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.


name: negative regulation of abscisic acid biosynthetic process

description: Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.


name: platelet-derived growth factor production

description: The appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: regulation of platelet-derived growth factor production

description: Any process that modulates the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: positive regulation of platelet-derived growth factor production

description: Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: regulation of proteasome core complex assembly

description: Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles.


regulation of proteasome assembly

description: Any process that modulates the rate, frequency, or extent of the aggregation, arrangement and bonding together of a mature, active proteasome complex.


regulation of mRNA modification

description: Any process that modulates the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.


name: positive regulation of mRNA modification

description: Any process that increases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.


name: negative regulation of mRNA modification

description: Any process that decreases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.


name: regulation of ornithine metabolic process

description: Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.


name: ornithine carbamoyltransferase inhibitor activity

description: Binds to and stops, prevents, or reduces the activity of ornithine carbamoyltransferase.


name: negative regulation of cholesterol efflux

description: Any process that decreases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.


regulation of glycerol transport

description: Any process that modulates the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


name: positive regulation of glycerol transport

description: Any process that increases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


name: negative regulation of glycerol transport

description: Any process that decreases the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


oligopeptide export from mitochondrion

description: The process in which an oligopeptide is transported out of the mitochondrial matrix. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.


seed trichome differentiation

description: The process in which a relatively unspecialized epidermal cell acquires the specialized features of a seed trichome. A seed trichome is a trichome that develops from seed coat epidermis and is often long with putative dispersal function.


seed trichome initiation

description: The process in which the developmental fate of an epidermal cell becomes restricted such that it will develop into a seed trichome, causing a change in the orientation of cell division in the ovule epidermis at or just before anthesis.


seed trichome elongation

description: The process in which a seed trichome irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.


name: secondary cell wall biogenesis involved in seed trichome differentiation

description: A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall of seed trichomes after cell expansion is complete.


seed trichome maturation

description: A developmental process, independent of morphogenetic (shape) change, that is required for a seed trichome to attain its fully functional state.


regulation of heart induction

description: Any process that modulates the rate, frequency, or extent of heart induction. Heart induction is the close range interaction between mesoderm and endoderm or ectoderm that causes cells to change their fates and specify the development of the heart.


phagosome maturation

description: A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.


phagosome acidification

description: Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion.


phagosome-lysosome docking

description: The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere.


phagosome-lysosome fusion

description: The creation of a phagolysosome from a phagosome and a lysosome.


name: phagosome maturation involved in apoptotic cell clearance

description: A process that is carried out at the cellular level which results in the arrangement of constituent parts of a phagosome within a cell and contributes to apoptotic cell clearance. Phagosome maturation begins with endocytosis and formation of the early phagosome and ends with the formation of the hybrid organelle, the phagolysosome.


name: phagolysosome assembly involved in apoptotic cell clearance

description: The process in which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome as a part of apoptotic cell clearance.


name: phagosome-lysosome docking involved in apoptotic cell clearance

description: The initial attachment of a phagosome membrane to a lysosome membrane that occurs as a part of apoptotic cell clearance. Docking requires only that the proteins come close enough to interact and adhere.


name: phagosome-lysosome fusion involved in apoptotic cell clearance

description: The creation of a phagolysosome from a phagosome and a lysosome as a part of apoptotic cell clearance.


name: phagosome acidification involved in apoptotic cell clearance

description: Any process that reduces the pH of the phagosome, measured by the concentration of the hydrogen ion, and occurs as a part of apoptotic cell clearance.


granum assembly

description: A process that is carried out at the cellular level which results in the assembly of a granum. A granum is a distinct stack of lamellae seen within chloroplasts.


sepal giant cell differentiation

description: The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C.


sepal giant cell development

description: The process aimed at the progression of a sepal giant cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.


name: negative regulation of excitatory postsynaptic potential

description: Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.


plant cell papilla

description: A cell projection that is a short, rounded projection from a plant epidermal cell.


leaf papilla

description: A plant cell papilla that is part of a leaf papilla cell.


stigma papilla

description: A plant cell papilla that is part of a stigma papilla cell.


cellular senescence

description: A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest.


replicative senescence

description: A cell aging process associated with the dismantling of a cell as a response to telomere shortening and/or cellular aging.


stress-induced premature senescence

description: A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.


oncogene-induced cell senescence

description: A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.


name: oxidative stress-induced premature senescence

description: A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals.


pollen tube tip

description: The region at growing end of the pollen tube cell, where polarized growth occurs.


unicellular trichome branch

description: A cell projection part that is a branch of a unicellular trichome.


pollen tube

description: A tubular cell projection that is part of a pollen tube cell and extends from a pollen grain.


organophosphate biosynthetic process

description: The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.


phloem nitrate loading

description: The process of loading nitrate into the sieve tube or companion cell of the phloem for long distance transport from source to sink.


malonyl-CoA synthetase activity

description: Catalysis of the reaction: malonate + ATP + coenzyme A = malonyl-CoA + AMP + diphosphate.


malonate catabolic process

description: The chemical reactions and pathways resulting in the breakdown of malonate, the propanedioate ion.


brassinosteroid binding

description: Binding to a brassinosteroid.


molybdate ion export from vacuole

description: The directed movement of molybdate ions out of the vacuole.


name: 7-hydroxymethyl chlorophyll a reductase activity

description: Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.


name: nicotinate transmembrane transporter activity

description: Enables the transfer of nicotinate from one side of a membrane to the other.


name: N-methylnicotinate transmembrane transporter activity

description: Enables the transfer of N-methylnicotinate from one side of a membrane to the other.


embryonic meristem initiation

description: Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.


name: thiamine pyrophosphate transmembrane transporter activity

description: Enables the transfer of thiamine pyrophosphate a substance from one side of a membrane to the other.


phytochelatin-metal complex formation

description: A phytochelatin metabolic process in which a metal is incorporated with phytochelatin to form a complex.


description: A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.


acinar cell differentiation

description: The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini.


actin filament bundle convergence

description: A process of actin filament bundle distribution that results in the compaction of actin filaments.


activation of meiosis

description: Any process that starts the inactive process of meiosis.


perianth development

description: The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.


detection of endogenous biotic stimulus

description: The series of events in which an endogenous biotic stimulus is received by a cell and converted into a molecular signal.


name: caffeoyl-CoA: alcohol caffeoyl transferase activity

description: Catalysis of the reaction: caffeoyl-CoA + a saturated primary alcohol = an alkyl caffeate + CoA.


name: alkyl caffeate ester biosynthetic process

description: The chemical reactions and pathways resulting in the formation of ester derivatives of alkyl caffeate.


myristoyl-CoA ligase activity

description: Catalysis of the reaction: ATP + myristic acid + CoA = AMP + diphosphate + myristoyl-CoA.


palmitoyl-CoA ligase activity

description: Catalysis of the reaction: ATP + palmitic acid + CoA = AMP + diphosphate + palmitoyl-CoA.


oleoyl-CoA ligase activity

description: Catalysis of the reaction: ATP + oleic acid + CoA = AMP + diphosphate + oleoyl-CoA.


name: protein localization to nuclear envelope

description: A process in which a protein is transported to, or maintained at, a location within a nuclear envelope.


leaf pavement cell development

description: The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.


socket cell differentiation

description: The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.


camelliol C synthase activity

description: Catalyzes the reaction: (3S)-2,3-epoxy-2,3-dihydrosqualene = camelliol C.


name: tetraketide alpha-pyrone synthase activity

description: Catalyzes the reaction: a hydroxyacyl-CoA + 3 malonyl-CoA + 2 H+ = a hydroxylated tetraketide alpha-pyrone + 3 CO2 + 4 coenzyme A .


name: abscisic acid transmembrane transporter activity

description: Enables the transfer of abscisic acid from one side of a membrane to the other.


name: trehalose biosynthesis in response to heat stress

description: The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.


name: trehalose catabolism in response to heat stress

description: The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.


FAR/SIN/STRIPAK complex

description: A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.


name: regulation of nematode larval development, heterochronic

description: Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.


name: positive regulation of nematode larval development, heterochronic

description: Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and increases the rate at which this time point is reached.


name: negative regulation of nematode larval development, heterochronic

description: Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and decreases the rate at which this time point is reached.


description: Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = CoA + a 2-acyl-sn-glycerol 3-phosphate.


name: glucosinolate:proton symporter activity

description: Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in).


phloem glucosinolate loading

description: The process of loading glucosinolates into the sieve tube or companion cell of the phloem for long distance transport from source to sink.


cotyledon boundary formation

description: The process in which boundaries between a cotyledon and the surrounding tissue are established and maintained.


lithium ion transmembrane transport

description: The directed movement of lithium ions (Li+) across a membrane.


name: aspartate transmembrane import into vacuole

description: The directed movement of aspartate into the vacuole across the vacuolar membrane.


name: glutamate transmembrane import into vacuole

description: The directed movement of glutamate into the vacuole across the vacuolar membrane.


name: ornithine transmembrane import into vacuole

description: The directed movement of ornithine into the vacuole across the vacuolar membrane.


intracellular aspartate homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of aspartate within a cell.


intracellular threonine homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of threonine within a cell.


intracellular glutamate homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of glutamate within a cell.


intracellular ornithine homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of orthinine within a cell.


intracellular lysine homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of lysine within a cell.


intracellular histidine homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of histidine within a cell.


intracellular arginine homeostasis

description: A homeostatic process involved in the maintenance of a steady state level of arginine within a cell.


shoot organ boundary specification

description: The process in which the basal boundary between the stem and both vegetative and reproductive organs are established and maintained.


description: Catalysis of the reaction: 9,15,9'-tricis-zeta-carotene = 9,9'-dicis-zeta-carotene.


dibasic protein processing

description: Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein.


name: lys-arg specific dibasic protein processing

description: Any protein processing achieved by the cleavage of a peptide bond after a lysine-arginine amino acid residue combination within a protein.


name: arg-arg specific dibasic protein processing

description: Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein.


name: lys-lys specific dibasic protein processing

description: Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.


name: purine nucleotide-sugar transmembrane transport

description: The process in which a purine nucleotide-sugar is transported across a membrane. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.


name: pyrimidine nucleotide-sugar transmembrane transport

description: The process in which a pyrimidine nucleotide-sugar is transported across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.


name: vitamin transmembrane transporter activity

description: Enables the transfer of a vitamin from one side of a membrane to the other.


description: Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine.


name: small RNA 2'-O-methyltransferase activity

description: Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA = S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide.


secondary metabolite catabolic process

description: The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.


polo box domain specific binding

description: Binding to a polo box domain of a protein. The polo box domain is involved in binding substrates of polo kinases.


tryptophan N-monooxygenase activity

description: Catalyzes the multi-step reaction: L-tryptophan + 2 O2 + 2 reduced [NADPH--hemoprotein reductase] = (E)-(indol-3-yl)acetaldehyde oxime + CO2 + 2 H+ + 3 H2O + 2 oxidized [NADPH--hemoprotein reductase].


catecholamine uptake

description: The directed movement of catecholamine into a cell.


dopamine uptake

description: The directed movement of dopamine into a cell.


name: low-density lipoprotein particle disassembly

description: The disaggregation of a low-density lipoprotein particle into its constituent components.


name: mesenchyme migration involved in limb bud formation

description: The migration of mesenchymal tissue that contributes to the formation of a limb bud.


mesenchymal cell migration

description: The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism.


extrinsic component of Golgi membrane

description: The component of a Golgi membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


name: pimelyl-[acyl-carrier protein] methyl ester esterase activity

description: Catalysis of the reaction: pimelyl-[acyl-carrier protein] methyl ester + H2O = pimelyl-[acyl-carrier protein] + methanol.


name: endocardial cushion to mesenchymal transition

description: A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.


epiboly

description: The expansion of one cell sheet over other cells or yolk.


epiboly involved in wound healing

description: The expansion of one cell sheet over other cells involved in wound healing.


axillary shoot meristem initiation

description: A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.


name: phenylethylamine metabolic process involved in synaptic transmission

description: The chemical reactions and pathways involving phenylethylamine that contribute to synaptic transmission.


name: phenylethylamine biosynthetic process involved in synaptic transmission

description: The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission.


anticlinal cell division

description: A cell division process where the division plane is perpendicular to the surface of the organ. It adds cells to the existing cell layer or cell file.


periclinal cell division

description: A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file.


eisosome membrane domain/MCC

description: A plasma membrane part that is composed of a furrow-like plasma membrane domain and associated integral transmembrane proteins.


name: L-histidine transmembrane import into vacuole

description: The directed movement of L-histidine into the vacuole across the vacuolar membrane.


name: L-tyrosine transmembrane import into vacuole

description: The directed movement of L-tyrosine into the vacuole across the vacuolar membrane.


name: L-glutamate transmembrane import into vacuole

description: The directed movement of L-glutamate into the vacuole across the vacuolar membrane.


name: L-serine transmembrane import into vacuole

description: The directed movement of L-serine into the vacuole across the vacuolar membrane.


name: L-lysine transmembrane import into vacuole

description: The directed movement of L-lysine into the vacuole across the vacuolar membrane.


name: L-arginine transmembrane import into vacuole

description: The directed movement of L-arginine into the vacuole across the vacuolar membrane.


anoxia protection

description: Any process in which an organism or cell protects itself from anoxia, which may also result in resistance to repeated exposure to anoxia.


sphingolipid mediated signaling pathway

description: The series of molecular signals mediated by a sphingolipid.


podocyte cell migration

description: The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell.


name: vesicle tethering involved in exocytosis

description: The initial, indirect interaction between a secretory vesicle membrane and a site of exocytosis in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to docking and fusion.


name: cytochrome-b5 reductase activity, acting on NADPH

description: Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome b(5) = NADP+ + 2 ferrocytochrome b(5).


name: cytochrome-b5 reductase activity, acting on NADH

description: Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5).


smooth septate junction assembly

description: The assembly of a smooth septate junction, a septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.


cell septum assembly

description: The assembly and arrangement of a cellular component that is composed of peptidoglycan and often chitin in addition to other materials and usually forms perpendicular to the long axis of a cell or hypha. It grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.


name: L-ascorbic acid biosynthetic process via GDP-alpha-D-mannose

description: The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate GDP-alpha-D-mannose.


name: L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate

description: The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate UDP-alpha-D-glucuronate.


cation-transporting ATPase complex

description: Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).


calcium ion-transporting ATPase complex

description: Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).


WICH complex

description: An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair.


NoRC complex

description: An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and a Tip5 homolog. In mammals, NoRC is involved in regulation of transcription from RNAP I and RNA polymerase III promoters.


CERF complex

description: An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2L in mammals, which contain two ISWI homologs) and a CECR2 homolog. In mammals, CERF is involved in regulation of transcription from RNA polymerase II promoters.


peptide pheromone secretion

description: The regulated release of a peptide pheromone from a cell.


name: peptide pheromone export by transmembrane transport

description: The directed movement of a peptide pheromone across a membrane and out of a cell.


name: bacterial cellulose biosynthetic process

description: The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as it occurs in certain types of bacteria, mainly Acetobacter, Sarcina ventriculi and Agrobacteria.


MIT domain binding

description: Binding to a MIT protein domain. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.


ELYC domain binding

description: Binding to a ELYC protein domain. The ELYC domain is an approximately 150 amino acid sequence which contains a highly conserved tetrapeptide sequence, ELYC.


Flemming body

description: A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge.


CHD-type complex

description: A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure.


chlorophyll fluorescence

description: The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is re-emitted as light.


response to low humidity

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.


response to nitrate starvation

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nitrate.


response to carbon starvation

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.


response to molybdenum starvation

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of molybdenum.


response to manganese starvation

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese.


unicellular trichome apex

description: A cell projection part that is the apical most portion of a unicellular trichome.


unicellular trichome tip

description: A cell projection part that is the apical most portion of a unicellular trichome apex.


phosphatidylcholine floppase activity

description: Catalysis of the movement of phosphatidylcholine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.


description: Catalysis of the movement of phosphatidylethanolamine from the exoplasmic to the cytosolic leaftlet of a membrane, using energy from the hydrolysis of ATP.


phosphatidylserine floppase activity

description: Catalysis of the movement of phosphatidylserine from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.


name: establishment of endothelial intestinal barrier

description: The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.


plant epidermis development

description: The process whose specific outcome is the progression of the plant epidermis over time, from its formation to the mature structure.


regulation of membrane permeability

description: Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane.


description: Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2].


name: nuclear migration during mitotic telophase

description: The dynein-driven microtubule based nuclear migration, whereby daughter nuclei are positioned away from the cell division site prior to cytokinesis.


name: protein-N(PI)-phosphohistidine-N,N'-diacetylchitobiose phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N,N'-diacetylchitobiose(out) = protein histidine + N,N'-diacetylchitobiose phosphate(in).


description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + sugar(out) = protein cysteine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.


name: protein-phosphocysteine-glucose phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucose(out) = protein cysteine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.


name: protein-phosphocysteine-mannitol phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.


name: protein-phosphocysteine-N,N'-diacetylchitobiose phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N,N'-diacetylchitobiose(out) = protein cysteine + N,N'-diacetylchitobiose phosphate(in).


reproductive shoot system development

description: The process whose specific outcome is the progression of a reproductive shoot system over time, from its formation to the mature structure.


name: RNA polymerase I transcription repressor complex

description: A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase I promoter.


name: RNA polymerase II transcription repressor complex

description: A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase II promoter.


name: RNA polymerase III transcription repressor complex

description: A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase III promoter.


name: RNA polymerase IV transcription repressor complex

description: A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter.


name: RNA polymerase V transcription repressor complex

description: A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.


name: RNA polymerase II transcription regulator complex

description: A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase II.


name: RNA polymerase III transcription regulator complex

description: A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.


name: RNA polymerase IV transcription regulator complex

description: A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase IV.


name: RNA polymerase V transcription regulator complex

description: A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase V.


name: phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands

description: Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.


name: protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in).


name: protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in).


name: protein-phosphocysteine-D-sorbitol-phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-sorbitol(out) = protein cysteine + D-sorbitol-1-phosphate(in).


name: protein-phosphocysteine-galactitol-phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + galactitol(out) = protein cysteine + galactitol-6-phosphate(in).


name: protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + L-ascorbate(out) = protein cysteine + L-ascorbate-6-phosphate(in).


name: protein-phosphocysteine-N-acetylglucosamine phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylglucosamine (out) = protein cysteine + N-acetylglucosamine-6-phosphate (in).


name: protein-phosphocysteine-glucosamine phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucosamine (out) = protein cysteine + glucosamine-6-phosphate (in).


name: protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylmuramate (out) = protein cysteine + N-acetylmuramate-6-phosphate (in).


name: protein-phosphocysteine-trehalose phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + trehalose (out) = protein cysteine + trehalose-6-phosphate (in).


name: protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity

description: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + D-glucosamine(out) = protein histidine + glucosamine-6-phosphate(in).