name: A7K915_9PHYC Uncharacterized protein Z405L (trembl)


name: A7K917_9PHYC Uncharacterized protein Z407L (trembl)


name: A7K919_9PHYC Uncharacterized protein Z409L (trembl)


name: A7K926_9PHYC Uncharacterized protein Z416L (trembl)


name: A7K927_9PHYC cellulose synthase (UDP-forming) (trembl)


name: A7K929_9PHYC Uncharacterized protein z419L (trembl)


name: A7K931_9PHYC Uncharacterized protein Z421L (trembl)


carbon-carbon lyase activity

category: biolink:MolecularActivity biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.


carboxylic acid metabolic process

category: biolink:BiologicalProcess biolink:Occurrent biolink:OntologyClass biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).


name: A7K935_9PHYC cellulose synthase (UDP-forming) (trembl)


name: A7K940_9PHYC Uncharacterized protein Z430L (trembl)


name: A7K955_9PHYC Uncharacterized protein z445R (trembl)


name: A7K956_9PHYC Uncharacterized protein z446R (trembl)


name: A7K958_9PHYC Uncharacterized protein z448L (trembl)


name: A7K962_9PHYC Uncharacterized protein Z452R (trembl)


name: A7K966_9PHYC Uncharacterized protein z456L (trembl)


name: A7K967_9PHYC Uncharacterized protein Z457L (trembl)


deoxynucleoside kinase activity

description: Catalysis of the reaction: ATP + 2'-deoxynucleoside = ADP + 2'-deoxynucleoside 5'-phosphate.


name: A7K969_9PHYC Uncharacterized protein Z459L (trembl)


name: A7K979_9PHYC Uncharacterized protein Z469L (trembl)


name: A7K984_9PHYC Uncharacterized protein Z474R (trembl)


name: A7K991_9PHYC Uncharacterized protein Z481L (trembl)


name: A7K999_9PHYC Uncharacterized protein Z489L (trembl)


name: A7K9B0_9PHYC dUTP diphosphatase (trembl)


name: A7K9B2_9PHYC Uncharacterized protein Z502R (trembl)


name: A7K9B6_9PHYC Uncharacterized protein Z506L (trembl)


name: A7K9B9_9PHYC Uncharacterized protein Z509L (trembl)


name: A7K9C1_9PHYC Uncharacterized protein Z511L (trembl)


name: A7K9C7_9PHYC Uncharacterized protein Z517R (trembl)


name: A7K9C9_9PHYC Uncharacterized protein z519L (trembl)


name: A7K9D3_9PHYC Uncharacterized protein Z523L (trembl)


name: A7K9D7_9PHYC Uncharacterized protein z527L (trembl)


name: A7K9E0_9PHYC Uncharacterized protein Z530L (trembl)


name: A7K9E3_9PHYC Uncharacterized protein Z533L (trembl)


name: A7K9F4_9PHYC Uncharacterized protein Z544R (trembl)


name: A7K9F8_9PHYC Uncharacterized protein Z548L (trembl)


name: A7K9F9_9PHYC Uncharacterized protein z549R (trembl)


name: A7K9G0_9PHYC Uncharacterized protein z550R (trembl)


name: A7K9G1_9PHYC DNA topoisomerase 2 (trembl)


name: A7K9G4_9PHYC Uncharacterized protein z554R (trembl)


name: A7K9G8_9PHYC Uncharacterized protein Z558L (trembl)


name: A7K9H1_9PHYC Uncharacterized protein Z561L (trembl)


name: A7K9H3_9PHYC Uncharacterized protein z563R (trembl)


name: A7K9I0_9PHYC Uncharacterized protein z570L (trembl)


name: A7K9I1_9PHYC UDP-glucose 6-dehydrogenase (trembl)


UDP-glucose 6-dehydrogenase activity

description: Catalysis of the reaction: H2O + 2 NAD+ + UDP-alpha-D-glucose = 3 H+ + 2 NADH + UDP-alpha-D-glucuronate.


UDP-glucuronate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.


name: A7K9I5_9PHYC Uncharacterized protein Z575R (trembl)


name: A7K9I6_9PHYC Uncharacterized protein Z576R (trembl)


name: A7K9J3_9PHYC Uncharacterized protein z583R (trembl)


name: A7K9J5_9PHYC Uncharacterized protein Z585R (trembl)


name: A7K9K3_9PHYC Uncharacterized protein z593R (trembl)


name: A7K9K6_9PHYC Uncharacterized protein Z596R (trembl)


name: nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay

description: The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.


Ski complex

category: biolink:CellularComponent biolink:AnatomicalEntity biolink:PhysicalEssence biolink:OrganismalEntity biolink:SubjectOfInvestigation biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: A protein complex that regulates RNA degradation by the exosome complex. In Saccharomyces the complex has a heterotetrameric stoichiometry consisting of one copy each of Ski2p and Ski3 and two copies of Ski8p.


name: A7K9L0_9PHYC Uncharacterized protein z600L (trembl)


name: A7K9L5_9PHYC Uncharacterized protein Z605R (trembl)


name: A7K9L8_9PHYC Uncharacterized protein z608L (trembl)


name: A7K9L9_9PHYC Uncharacterized protein Z609R (trembl)


name: A7K9M2_9PHYC Uncharacterized protein Z612R (trembl)


name: A7K9M6_9PHYC Uncharacterized protein Z616L (trembl)


dCMP deaminase activity

description: Catalysis of the reaction: dCMP + H2O = dUMP + NH3.


pyrimidine nucleotide metabolic process

description: The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.


name: A7K9M7_9PHYC Uncharacterized protein z617L (trembl)


name: A7K9M9_9PHYC Uncharacterized protein Z619L (trembl)


name: A7K9N0_9PHYC Uncharacterized protein z620R (trembl)


name: A7K9N4_9PHYC Uncharacterized protein z624R (trembl)


name: A7K9N5_9PHYC Uncharacterized protein Z625L (trembl)


name: A7K9N9_9PHYC Uncharacterized protein Z629R (trembl)


name: A7K9P1_9PHYC Uncharacterized protein z631R (trembl)


name: A7K9P3_9PHYC Uncharacterized protein Z633L (trembl)


name: A7K9P5_9PHYC Uncharacterized protein z635R (trembl)


name: A7K9P7_9PHYC Uncharacterized protein Z637L (trembl)


name: A7K9P9_9PHYC Uncharacterized protein z639R (trembl)


name: A7K9Q0_9PHYC Uncharacterized protein Z640R (trembl)


name: A7K9Q1_9PHYC Uncharacterized protein Z641L (trembl)


name: A7K9Q3_9PHYC Uncharacterized protein Z643L (trembl)


name: A7K9Q4_9PHYC Uncharacterized protein z644R (trembl)


name: A7K9Q8_9PHYC Uncharacterized protein z648L (trembl)


name: A7K9R7_9PHYC Uncharacterized protein z657R (trembl)


name: A7K9R9_9PHYC Uncharacterized protein z659R (trembl)


name: A7K9S1_9PHYC Uncharacterized protein Z661L (trembl)


name: A7K9S2_9PHYC Uncharacterized protein z662L (trembl)


name: A7K9S3_9PHYC Uncharacterized protein Z663R (trembl)


name: A7K9S4_9PHYC Uncharacterized protein Z664R (trembl)


name: A7K9S7_9PHYC Uncharacterized protein Z667L (trembl)


description: Catalysis of the reaction: UDP-sulfoquinovose + 1,2-diacylglycerol = sulfoquinovosyldiacylglycerol + UDP.


glycolipid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).


sulfolipid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of sulfolipid, a compound containing a sulfonic acid residue joined by a carbon-sulfur bond to a lipid.


chloroplast envelope

description: The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.


name: A7K9T0_9PHYC Uncharacterized protein z670R (trembl)


name: A7K9T6_9PHYC Uncharacterized protein Z676R (trembl)


name: A7K9T9_9PHYC Uncharacterized protein Z679L (trembl)


name: A7K9U4_9PHYC Uncharacterized protein z684R (trembl)


name: A7K9U8_9PHYC Uncharacterized protein z688R (trembl)


name: A7K9U9_9PHYC Uncharacterized protein Z689R (trembl)


name: A7K9V0_9PHYC Uncharacterized protein z690L (trembl)


name: A7K9V1_9PHYC Uncharacterized protein z691R (trembl)


name: A7K9V5_9PHYC Uncharacterized protein z695R (trembl)


name: A7K9V6_9PHYC Uncharacterized protein Z696R (trembl)


name: potassium ion transmembrane transporter activity

description: Enables the transfer of potassium ions (K+) from one side of a membrane to the other.


potassium ion transport

description: The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


potassium ion transmembrane transport

description: A process in which a potassium ion is transported from one side of a membrane to the other.


name: A7K9W7_9PHYC Uncharacterized protein Z707L (trembl)


name: A7K9W8_9PHYC Uncharacterized protein Z708L (trembl)


name: A7K9X6_9PHYC Uncharacterized protein Z716R (trembl)


name: A7K9X7_9PHYC Uncharacterized protein Z717R (trembl)


name: A7K9X9_9PHYC mRNA guanylyltransferase (trembl)


name: A7K9Y3_9PHYC Uncharacterized protein Z723R (trembl)


name: A7K9Y4_9PHYC Uncharacterized protein Z724R (trembl)


name: A7K9Y6_9PHYC Uncharacterized protein z726R (trembl)


name: A7K9Y8_9PHYC tRNA(Ile)-lysidine synthetase (trembl)


name: ligase activity, forming carbon-nitrogen bonds

description: Catalysis of the joining of two molecules, or two groups within a single molecule, via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.


tRNA processing

description: The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.


name: A7K9Z4_9PHYC Uncharacterized protein Z734R (trembl)


name: A7KA00_9PHYC Uncharacterized protein Z740R (trembl)


name: A7KA04_9PHYC Uncharacterized protein Z744R (trembl)


cytosine deaminase activity

description: Catalysis of the reaction: cytosine + H2O = uracil + NH3.


pyrimidine-containing compound salvage

description: Any process that generates a pyrimidine-containing compound, a nucleobase, nucleoside, nucleotide or nucleic acid that contains a pyrimidine base, from derivatives of them without de novo synthesis.


cytosine metabolic process

description: The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.


cytidine metabolic process

description: The chemical reactions and pathways involving cytidine, cytosine riboside, a widely distributed nucleoside.


chloroplast

description: A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.


name: A7KA05_9PHYC Uncharacterized protein Z745R (trembl)


name: A7KA10_9PHYC Uncharacterized protein Z750R (trembl)


name: A7KA12_9PHYC Uncharacterized protein Z752L (trembl)


name: mannose-1-phosphate guanylyltransferase (GTP) activity

description: Catalysis of the reaction: alpha-D-mannose 1-phosphate + GTP = diphosphate + GDP-alpha-D-mannose.


polysaccharide metabolic process

description: The chemical reactions and pathways involving a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.


name: A7KA20_9PHYC ornithine decarboxylase (trembl)


ornithine decarboxylase activity

description: Catalysis of the reaction: L-ornithine + H+ = CO2 + putrescine.


polyamine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.


name: putrescine biosynthetic process from ornithine

description: The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane by decarboxylation of ornithine.


name: A7KA23_9PHYC Uncharacterized protein z763L (trembl)


name: A7KA24_9PHYC Uncharacterized protein z764L (trembl)


name: A7KA27_9PHYC Uncharacterized protein Z767L (trembl)


name: A7KA28_9PHYC Uncharacterized protein z768R (trembl)


name: A7KA33_9PHYC Uncharacterized protein Z773L (trembl)


polyamine oxidase activity

description: Catalysis of the oxidative degradation or interconversion of polyamines.


polyamine catabolic process

description: The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups.


name: A7KA37_9PHYC Uncharacterized protein z777R (trembl)


name: A7KA40_9PHYC Uncharacterized protein Z780L (trembl)


chitinase activity

description: Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.


chitin catabolic process

description: The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.


name: A7KA43_9PHYC Uncharacterized protein z783R (trembl)


name: A7KA45_9PHYC Uncharacterized protein Z785L (trembl)


name: A7KA46_9PHYC Uncharacterized protein Z786R (trembl)


name: A7KA48_9PHYC Uncharacterized protein Z788R (trembl)


name: A7KA64_9PHYC GDP-mannose 4,6-dehydratase (trembl)


GDP-mannose 4,6-dehydratase activity

description: Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.


GDP-mannose metabolic process

description: The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate.


name: A7KA66_9PHYC Uncharacterized protein Z806R (trembl)


protein-arginine deiminase activity

description: Catalysis of the reaction: H2O + L-arginyl-[protein] = L-citrullyl-[protein] + NH4+, resulting in citrullination of the target protein. This reaction is calcium-dependent.


agmatine deiminase activity

description: Catalysis of the reaction: agmatine + H2O = N-carbamoylputrescine + NH3.


putrescine biosynthetic process

description: The chemical reactions and pathways resulting in the formation of putrescine, 1,4-diaminobutane; putrescine can be synthesized from arginine or ornithine and is the metabolic precursor of spermidine and spermine.


name: A7KA74_9PHYC Uncharacterized protein Z814L (trembl)


endochitinase activity

description: Catalysis of the hydrolysis of nonterminal (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, endochitinases cleave randomly within the chitin chain.


polysaccharide binding

description: Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.


name: A7KA78_9PHYC Uncharacterized protein Z818L (trembl)


thymidylate synthase (FAD) activity

description: Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP + NADPH + H+ = dTMP + tetrahydrofolate + NADP+.


NADPH binding

description: Binding to the reduced form, NADPH, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.


name: A7KA79_9PHYC Uncharacterized protein Z819L (trembl)


name: A7KA81_9PHYC Uncharacterized protein z821R (trembl)


name: A7KA83_9PHYC cellulose synthase (UDP-forming) (trembl)


name: A7KA90_9PHYC Uncharacterized protein Z830R (trembl)


description: Catalysis of the reaction: UDP-D-xylose + D-ribitol 5-phosphate-R = UDP + beta1,4-xylosyl-D-ribitol 5-phosphate-R.


protein O-linked mannosylation

description: The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage.


name: A7KA92_9PHYC Uncharacterized protein Z832L (trembl)


polysaccharide catabolic process

description: The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.


name: A7KA98_9PHYC ribonucleoside-triphosphate reductase (thioredoxin) (trembl)


description: Catalysis of the reaction: 2'-deoxyribonucleoside triphosphate + thioredoxin disulfide + H2O = ribonucleoside triphosphate + thioredoxin.


cobalamin binding

description: Binding to cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.


name: A7KAA1_9PHYC Uncharacterized protein z841R (trembl)


name: A7KAA9_9PHYC Uncharacterized protein Z849R (trembl)


name: A7KAB0_9PHYC Uncharacterized protein z850L (trembl)


name: L7P648_9CIRC Replication-associated protein (trembl)


name: M1JD72_9VIRU ATP-dependent helicase Rep (trembl)


name: K7X4M8_9MONO Non-structural protein V (trembl)


name: symbiont-mediated suppression of host type I interferon-mediated signaling pathway

description: A process in which a symbiont interferes with, inhibits or disrupts a type I interferon-mediated signaling in the host organism. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.


name: symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity

description: A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by inhibiting the activity of MDA-5 (also known as IFIH1). The cytoplasmic pattern recognition receptor MDA-5 detects dsRNA synthesized during active viral replication and triggers a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.


name: symbiont-mediated perturbation of host cellular process

description: A process in which a symbiont initiates, promotes, or enhances the execution of a cellular process in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: K7X4N2_9MONO RNA-directed RNA polymerase L (trembl)


structural constituent of virion

description: The action of a molecule that contributes to the structural integrity of a virion.


virion assembly

description: A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.


name: K7XBE1_9MONO Attachment protein (trembl)


exo-alpha-sialidase activity

description: Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.


host cell surface receptor binding

description: Binding to a receptor on the host cell surface.


viral life cycle

description: A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.


virion attachment to host cell

description: The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.


symbiont entry into host cell

description: The process by which a symbiont breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the symbiont or its genome is released into the host cell.


virion membrane

description: The lipid bilayer surrounding a virion.


viral nucleocapsid

description: The complete protein-nucleic acid complex that is the packaged form of the genome in a virus particle.


helical viral capsid

description: The protein coat that surrounds the infective nucleic acid in some virus particles; the subunits are arranged to form a protein helix with the genetic material contained within. Tobacco mosaic virus has such a capsid structure.


ribonucleoprotein complex

description: A macromolecular complex that contains both RNA and protein molecules.


name: K7XN73_9MONO Fusion glycoprotein F0 (trembl)


name: fusion of virus membrane with host plasma membrane

description: Fusion of a viral membrane with the host cell membrane during viral entry. Results in release of the virion contents into the cytoplasm.


name: A0A8K0YXK4_9VIRU Movement protein TGB2 (trembl)


name: transport of virus in host, cell to cell

description: The transport of a virus between adjacent cells in a multicellular organism.


host cell endoplasmic reticulum

description: The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).


name: host cell endoplasmic reticulum membrane

description: The lipid bilayer surrounding the host cell endoplasmic reticulum.


name: A0A8K0YXL0_9VIRU Movement protein TGBp3 (trembl)


name: A0A8K0YXN3_9VIRU Triple gene block protein 1 (trembl)


name: A0A8K1DQQ3_9VIRU Capsid protein (trembl)


name: A0A8K1DQT3_9VIRU Viral replicase (trembl)


name: A0A8K1DR73_9VIRU RNA silencing suppressor (trembl)


name: Q91UI8_9VIRU RNA silencing suppressor (trembl)


name: Q91UJ0_9VIRU Movement protein TGBp3 (trembl)


name: Q91UJ1_9VIRU Movement protein TGB2 (trembl)


name: A0A0U3TCD6_9VIRU Nucleocapsid protein (trembl)


name: A0A0U4CCN7_9VIRU RNA-directed RNA polymerase L (trembl)


name: A0A223A3I0_9CLOS Putative coat protein (trembl)


name: A0A223A3Q7_9CLOS Putative 58 kDa protein (Fragment) (trembl)


name: A0A223A460_9CLOS Putative transmembrane protein (trembl)


name: A0A223A4D7_9CLOS Putative thaumatin-like protein (trembl)


defense response

description: Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.


name: A0A223A549_9CLOS Heat shock protein 70-like protein (trembl)


name: G8H9D4_9VIRU Putative replicase (trembl)


host cell Golgi apparatus

description: A compound membranous cytoplasmic organelle of eukaryotic host cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack.


name: A0A6G5X254_9VIRU RNA-directed RNA polymerase L (trembl)


name: A0A6G5X2C3_9VIRU Uncharacterized protein (trembl)


name: POLS_ABPVR Structural polyprotein (sprot)


name: POLN_ABPVR Replicase polyprotein (sprot)


name: K4HHN2_ARV Non-structural transmembrane glycoprotein (trembl)


endomembrane system

description: A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.


host cell endomembrane system

description: A collection of membranous structures involved in transport within the host cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: K4HIF6_ARV Virion transmembrane glycoprotein (trembl)


name: A0A0A7W5B8_9POLY Large T antigen (trembl)


name: virus-mediated perturbation of host defense response

description: A process in which a virus interferes with the ability of the host to mount a defense in response to its presence. Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: symbiont-mediated suppression of host JAK-STAT cascade via inhibition of JAK1 activity

description: A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host JAK1 (Janus Kinase 1).


name: symbiont-mediated perturbation of host cell cycle G1/S transition checkpoint

description: A process in which a symbiont interferes with the normal execution of the host cell G1/S transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: symbiont-mediated suppression of host innate immune response

description: A process in which a symbiont inhibits or disrupts the normal execution of the innate immune response of the host organism, the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: A0A0A7W5I1_9POLY Minor capsid protein (trembl)


name: A0A0A7W722_9POLY Minor capsid protein VP2 (trembl)


description: Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing 2'-O-methyluridine.


name: rRNA (guanine) methyltransferase activity

description: Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing methylguanine.


name: ribonucleoside triphosphate phosphatase activity

description: Catalysis of the reaction: a ribonucleoside triphosphate + H2O = a ribonucleoside diphosphate + H+ + phosphate.


name: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

description: Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.


name: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

description: Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.


rRNA methylation

description: The posttranscriptional addition of methyl groups to specific residues in an rRNA molecule.


preribosome, large subunit precursor

description: A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.


name: AAP_AAV2S Assembly activating protein AAP (sprot)


host cell nucleolus

description: A small, dense body one or more of which are present in the nucleus of eukaryotic host cells.


protein binding

description: Binding to a protein.


viral genome replication

description: Any process involved directly in viral genome replication, including viral nucleotide metabolism.


name: symbiont-mediated arrest of host cell cycle during G2/M transition

description: A process in which a symbiont interferes with the progression of the host mitotic cell cycle from G2 phase to M phase, leading to arrest in G2 phase. The arrest in G2/M allows some viruses to replicate their genome before cells enter mitosis. Alternatively, it can inhibit the antiviral immune response by preventing the clonal expansion of infected lymphocytes.


name: permeabilization of host organelle membrane involved in viral entry into host cell

description: Induction of organellar membrane permeabilization triggered by an interaction between the host membrane and a membrane-penetration protein associated with a viral capsid. Results in release of the virus contents from an organelle into the host cell cytoplasm.


name: symbiont entry into host cell via permeabilization of inner membrane

description: The entry of a symbiont into the cytoplasm of a host cell, following fusion with the outer membrane, via permeabilization of the plasma (inner) membrane. This process mediates the entry of some non-enveloped viruses into prokaryotic cells. In the case of some double stranded RNA viruses of prokaryotes this occurs via interaction of a membrane-interacting component of the capsid, leading to depolarization and permeabilization of the plasma membrane.


name: clathrin-dependent endocytosis of virus by host cell

description: Any clathrin-mediated endocytosis that is involved in the uptake of a virus into a host cell. Begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicle containing the virus.


T=1 icosahedral viral capsid

description: The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=1 symmetry. The T=1 capsid is composed of 12 pentameric capsomeres.


name: A0A1J1DNU3_9TOMB Capsid protein (trembl)


T=3 icosahedral viral capsid

description: The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=3 symmetry. The T=3 capsid is composed of 12 pentameric and 20 hexameric capsomeres.


name: A0A1J1DWM6_9TOMB RNA-directed RNA polymerase (trembl)


name: A0A916KNR7_9POXV Uncharacterized protein (trembl)


name: A0A916KNR8_9POXV Uncharacterized protein (trembl)


name: A0A916KNT8_9POXV RING-type domain-containing protein (trembl)


name: A0A916KNU6_9POXV Thymidine kinase (trembl)


name: A0A916KNV3_9POXV VLTF-2 late transcription factor 2 (trembl)


name: A0A916KNV7_9POXV Ribonucleoside-diphosphate reductase small chain (trembl)


name: A0A916KNV8_9POXV Uncharacterized protein (trembl)


name: A0A916KNW2_9POXV DNA polymerase (trembl)


name: A0A916KNW7_9POXV Poly(A) polymerase catalytic subunit (trembl)


name: A0A916KNX1_9POXV Inhibitor of apoptosis 3 (trembl)


name: A0A916KNX6_9POXV mRNA decapping enzyme (Cop-D9R) (trembl)


name: A0A916KNY5_9POXV Uncharacterized protein (trembl)


name: A0A916KNY7_9POXV DNA topoisomerase (trembl)


name: A0A916KNY8_9POXV Entry-fusion complex protein OPG086 (trembl)


name: membrane fusion involved in viral entry into host cell

description: Merging of the virion membrane and a host membrane (host plasma membrane or host organelle membrane) that is involved in the uptake of a virus into a host cell.


name: A0A916KNZ1_9POXV Early transcription factor 82 kDa subunit (trembl)


name: positive regulation of DNA-templated transcription

description: Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription.


name: A0A916KNZ4_9POXV Uncharacterized protein (trembl)


name: A0A916KNZ5_9POXV DNA-directed RNA polymerase (trembl)


name: A0A916KP00_9POXV Uncharacterized protein (trembl)


name: A0A916KP01_9POXV RNA helicase NPH-II (trembl)


name: A0A916KP05_9POXV Ser/thr kinase (Cop-B1R) (trembl)


name: A0A916KP12_9POXV protein-serine/threonine phosphatase (trembl)


cation binding

description: Binding to a cation, a charged atom or group of atoms with a net positive charge.


name: A0A916KP14_9POXV Entry-fusion complex component, myristylprotein (trembl)


name: A0A916KP16_9POXV Uncharacterized protein (trembl)


name: A0A916KP27_9POXV Phospholipase A2-like domain-containing protein (trembl)


phospholipase A2 activity

description: Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospholipid + H2O = 1-acyl-sn-glycero-3-phospholipid + a fatty acid. This reaction removes the fatty acid attached to the sn2-position. Substrates include phosphatidylcholine, phosphatidylethanolamine, choline plasmalogen and phosphatides.


phospholipid metabolic process

description: The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester.


arachidonic acid secretion

description: The controlled release of arachidonic acid from a cell or a tissue.


name: A0A916KP28_9POXV Sensor histidine kinase (trembl)


name: A0A916KP29_9POXV 62 kDa protein (trembl)


response to antibiotic

description: Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.


name: A0A916KP31_9POXV Inhibitor of apoptosis 4 (trembl)


name: A0A916KP38_9POXV IMV MP/virus entry (Cop-A28L) (trembl)


viral process

description: A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.


name: A0A916KP40_9POXV Uncharacterized protein (trembl)


name: A0A916KP42_9POXV Entry and fusion IMV protein (Cop-L5R) (trembl)


name: A0A916KP45_9POXV Probable AP endonuclease (trembl)


name: A0A916KP48_9POXV Uncharacterized protein (trembl)


name: A0A916KP54_9POXV Leucine rich repeat gene family (trembl)


name: A0A916KP56_9POXV mRNA-capping enzyme catalytic subunit (trembl)


name: A0A916KP57_9POXV Viral late gene transcription factor 3 (trembl)


name: A0A916KP58_9POXV Uncharacterized protein (trembl)


name: A0A916KP59_9POXV Virion core protein 4b (trembl)


name: A0A916KP60_9POXV Late 16kDa membrane protein (Cop-J5L) (trembl)


name: A0A916KP61_9POXV glycylpeptide N-tetradecanoyltransferase (trembl)


name: A0A916KP62_9POXV RING-type domain-containing protein (trembl)


name: A0A916KP65_9POXV Uncharacterized protein (trembl)


name: A0A916KP66_9POXV Uncharacterized protein (trembl)


name: A0A916KP69_9POXV IMV membrane protein entry/fusion complex component (Cop-A21L) (trembl)


calcium ion binding

description: Binding to a calcium ion (Ca2+).


name: A0A916KP74_9POXV Viral membrane associated, early morphogenesis protein (Cop-A9L) (trembl)


name: A0A916KP75_9POXV P35 apoptosis inhibitor (trembl)


name: A0A916KP77_9POXV Uncharacterized protein (trembl)


name: A0A916KP78_9POXV Holliday junction resolvase (trembl)


name: A0A916KP80_9POXV DNA-directed RNA polymerase 147 kDa polypeptide (trembl)


name: A0A916KP88_9POXV Uncharacterized protein (trembl)


name: A0A916KP91_9POXV Virion core cysteine protease (trembl)


name: A0A916KP92_9POXV Uncharacterized protein (trembl)


name: A0A916KP98_9POXV Methyltransferase domain-containing protein (trembl)


name: A0A916KPA4_9POXV N1R/p28-like protein (trembl)


name: A0A916KPA7_9POXV Cu/Zn superoxide dismutase (trembl)


name: A0A916KPB0_9POXV Leucine rich repeat gene family (trembl)


name: A0A916KPB2_9POXV Protein phosphatase 2C (trembl)


name: A0A916KPB5_9POXV Uncharacterized protein (trembl)


name: A0A916KPB7_9POXV Uncharacterized protein (trembl)


name: A0A916KPC0_9POXV Uncharacterized protein (trembl)


name: A0A916KPC5_9POXV Uncharacterized protein (trembl)


name: A0A916KPD1_9POXV RNA polymerase-associated transcription-specificity factor RAP94 (trembl)


name: A0A916KPE1_9POXV Metalloprotease (Cop-G1L) (trembl)


ubiquitin conjugating enzyme binding

description: Binding to a ubiquitin conjugating enzyme, any of the E2 proteins.


protein polyubiquitination

description: Addition of multiple ubiquitin groups to a protein, forming a ubiquitin chain.


name: positive regulation of proteasomal ubiquitin-dependent protein catabolic process

description: Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.


ubiquitin ligase complex

description: A protein complex that includes a ubiquitin-protein ligase and enables ubiquitin protein ligase activity. The complex also contains other proteins that may confer substrate specificity on the complex.


name: A0A916KPG9_9POXV Myristylated protein, essential for entry/fusion (Cop-A16L) (trembl)


name: A0A916KPI1_9POXV Uncharacterized protein (trembl)


name: A0A916KPK6_9POXV Uncharacterized protein (trembl)


name: A0A916KPL3_9POXV Morph, VETF-s early transcription factor small (trembl)


name: A0A916KPM7_9POXV Uncharacterized protein (trembl)


name: A0A916KPN5_9POXV Uncharacterized protein (trembl)


name: A0A916NWN9_9POXV Early transcription factor 70 kDa subunit (trembl)


name: A0A916NWQ0_9POXV Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase (trembl)


regulation of mRNA 3'-end processing

description: Any process that modulates the frequency, rate or extent of mRNA 3'-end processing, any process involved in forming the mature 3' end of an mRNA molecule.


name: A0A916NWS5_9POXV Cell division protein FtsL (trembl)


name: A0A916NWU2_9POXV Uncharacterized protein (trembl)


name: A0A916NWW2_9POXV Uncharacterized protein (trembl)


name: A0A916NWY4_9POXV Uncharacterized protein (trembl)


name: A0A916NX03_9POXV Uncharacterized protein (trembl)


name: A0A916NX23_9POXV S-S bond formation pathway protein substrate (Cop-F9L) (trembl)


name: A0A916NX88_9POXV N1R/p28-like protein (trembl)


name: A0A916NXD0_9POXV P35 apoptosis inhibitor (trembl)


name: A0A916P041_9POXV G-protein coupled receptors family 2 profile 2 domain-containing protein (trembl)


name: transmembrane signaling receptor activity

description: Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.


cell surface receptor signaling pathway

category: biolink:Pathway biolink:OntologyClass biolink:BiologicalProcess biolink:Occurrent biolink:BiologicalProcessOrActivity biolink:BiologicalEntity biolink:ThingWithTaxon biolink:NamedThing biolink:PhysicalEssenceOrOccurrent

description: The series of molecular signals initiated by an extracellular ligand binding to a receptor located on the cell surface. The pathway ends with regulation of a downstream cellular process, e.g. transcription.


name: A0A916P060_9POXV Uncharacterized protein (trembl)


name: A0A916P069_9POXV Uncharacterized protein (trembl)


name: A0A916P091_9POXV dUTPase-like domain-containing protein (trembl)


name: A0A916P0A8_9POXV IMV membrane protein (Cop-L1R) (trembl)


name: A0A916P0B4_9POXV Nucleoside triphosphatase I (trembl)


name: A0A916P0M3_9POXV Uncharacterized protein (trembl)


name: A0A916P0P8_9POXV Uracil-DNA glycosylase, DNA polymerase processivity factor (trembl)


name: A0A916P0Q3_9POXV Reverse transcriptase domain-containing protein (trembl)


name: A0A916P0Q7_9POXV IMV heparin binding surface protein (trembl)


name: A0A916P0R1_9POXV DNA photolyase (trembl)


description: Catalysis of the reaction: cyclobutadipyrimidine (in DNA) = 2 pyrimidine residues (in DNA). This reaction represents the reactivation of irradiated DNA by light.


photoreactive repair

description: The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.


name: A0A916P0R3_9POXV Uncharacterized protein (trembl)


name: A0A916P0U8_9POXV Sulfhydryl oxidase FAD-linked (Cop-E10R) (trembl)


name: A0A916P0V5_9POXV Uncharacterized protein (trembl)


name: A0A916P0Y0_9POXV NAD-dependent DNA ligase (trembl)


name: A0A916P100_9POXV Serine/threonine-protein kinase 2 (trembl)


name: A0A916P625_9POXV Peptidase M10 metallopeptidase domain-containing protein (trembl)


name: A0A916P648_9POXV Uncharacterized protein (trembl)


name: A0A916P676_9POXV Uncharacterized protein (trembl)


name: A0A916P683_9POXV Uncharacterized protein (trembl)


name: A0A916P690_9POXV Uncharacterized protein (trembl)


name: A0A916P6A5_9POXV Entry-fusion complex essential component (Cop-H2R) (trembl)


name: Q80LH2_NPVAH Late expression factor 1 (trembl)


DNA primase activity

description: Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.


DNA replication, synthesis of primer

description: The synthesis of a short nucleotide polymer using one strand of unwound DNA as a template. The product is usually a RNA molecule between 4-15 nucleotides long that provides a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.


name: Q80LH3_NPVAH Uncharacterized protein (trembl)


name: Q80LH4_NPVAH Ecdysteroid UDP-glucosyltransferase (trembl)


UDP-glycosyltransferase activity

description: Catalysis of the transfer of a glycosyl group from a UDP-sugar to a small hydrophobic molecule.


name: Q80LH7_NPVAH Uncharacterized protein (trembl)


name: Q80LI4_NPVAH Fibroblast growth factor (trembl)


name: Q80LI5_NPVAH Uncharacterized protein (trembl)


name: Q80LJ0_NPVAH Superoxide dismutase (trembl)


name: Q80LJ2_NPVAH Calyx/polyhedral envelope protein (trembl)


name: Q80LJ4_NPVAH Capsid protein P24 (trembl)


name: Q80LJ6_NPVAH Late expression factor 2 (trembl)


viral transcription

description: The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.


name: Q80LJ8_NPVAH Protein kinase interacting protein (trembl)


name: Q80LK1_NPVAH Per os infectivity factor 2 (trembl)


name: Q80LK3_NPVAH Uncharacterized protein (trembl)


name: Q80LK6_NPVAH Uncharacterized protein (trembl)


name: Q80LK8_NPVAH Inhibitor of apoptosis protein 3 (trembl)


name: Q80LL5_NPVAH Uncharacterized protein (trembl)


name: Q80LL6_NPVAH Capsid protein P80 (trembl)


name: Q80LM0_NPVAH Basic DNA-binding protein P6.9 (trembl)


name: Q80LM1_NPVAH Late expression factor 5 (trembl)


name: Q80LM3_NPVAH Uncharacterized protein (trembl)


name: Q80LM5_NPVAH Occlusion-derived virus envelope protein E25 (trembl)


name: Q80LM8_NPVAH Late expression factor 4 (trembl)


name: Q80LM9_NPVAH Major capsid protein VP39 (trembl)


name: Q80LN0_NPVAH Capsid associated protein VP91 (trembl)


name: Q80LN5_NPVAH Very late factor 1 (trembl)


name: Q80LN8_NPVAH DNA-directed DNA polymerase (trembl)


name: Q80LP0_NPVAH Late expression factor 3 (trembl)


name: Q80LP2_NPVAH RrmJ-type SAM-dependent 2'-O-MTase domain-containing protein (trembl)


name: Q80LP3_NPVAH Inhibitor of apoptosis protein 2 (trembl)


name: Q80LP6_NPVAH Occlusion-derived virus envelope protein E66 (trembl)


name: Q80LP7_NPVAH DNA-directed RNA polymerase (trembl)


name: Q80LP8_NPVAH J domain-containing protein (trembl)


name: Q80LR1_NPVAH Late expression factor 9 (trembl)


viral occlusion body

description: A crystalline protein matrix surrounding the nucleocapsids of some insect viruses after their release in the environment. Produced in the host cell, the occlusion body protects the infectious virion after death of the host.


nuclease activity

description: Catalysis of the hydrolysis of ester linkages within nucleic acids.


2',3'-cyclic GMP-AMP binding

description: Binding to 2',3' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 2',5' and 3',5' linkages.


name: Q80LR9_NPVAH Envelope protein P74 (trembl)


name: Q80LS3_NPVAH Occlusion-derived virus envelope protein E18 (trembl)


name: Q80LS5_NPVAH Chitin-binding type-2 domain-containing protein (trembl)


structural constituent of ribosome

description: The action of a molecule that contributes to the structural integrity of the ribosome.


protein tag activity

description: A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to another protein where it acts as a marker, recognized by the cellular apparatus to target the tagged protein for some cellular process such as modification, sequestration, transport or degradation.


name: modification-dependent protein catabolic process

description: The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent modification of the target protein.


cytosolic small ribosomal subunit

description: The small subunit of a ribosome located in the cytosol.


name: LEF11_NPVAH Late expression factor 11 (sprot)


name: Q80LT8_NPVAH Occlusion-derived virus envelope protein E56 (trembl)


name: Q80LU4_NPVAH Alkaline exonuclease (trembl)


name: Q77IS9_GVAO Ecdysteroid UDP-glucosyltransferase (trembl)


name: Q7T9Q5_GVAO Late expression factor 8 (trembl)


base-excision repair, DNA ligation

description: The ligation by DNA ligase of DNA strands. Ligation occurs after polymerase action to fill the gap left by the action of endonucleases during base-excision repair.


name: Q7T9R5_GVAO Late expression factor 9 (trembl)


name: Q7T9S1_GVAO DNA-directed DNA polymerase (trembl)


name: Q7T9S4_GVAO Very late expression factor 1 (trembl)


name: Q7T9T5_GVAO Late expression factor 4 (trembl)


name: Q7T9U2_GVAO Late expression factor 5 (trembl)


name: Q7T9W5_GVAO Late expression factor 11 (trembl)


collagen catabolic process

description: The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells.


extracellular matrix

description: A structure lying external to one or more cells, which provides structural support, biochemical or biomechanical cues for cells or tissues.


name: Q7T9Z8_GVAO Polyhedral envelope protein-p10 (trembl)


name: Q7TA07_GVAO Chitin-binding protein 1 (trembl)


name: CAPSD_AADNV Capsid protein VP1/VP2 (sprot)


name: A0A2Z4GIN2_9MONO RNA-directed RNA polymerase (trembl)


name: A0A1Z2RT16_9VIRU Uncharacterized protein (trembl)


name: A0A1Z2RT28_9VIRU Virion glycoprotein N-terminal domain-containing protein (trembl)


name: A0A1Z2RT29_9VIRU Uncharacterized protein (trembl)


name: VP6_APRVF Microtubule-associated protein VP6 (sprot)


viral inner capsid

description: The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.


host cytoskeleton

description: A cellular structure that forms the internal framework of eukaryotic and prokaryotic host cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.


name: VP5_APRVF Outer capsid protein VP5 (sprot)


viral outer capsid

description: The outer layer of a double or triple concentric icosahedral capsid. Outer capsids are part of reoviridae and cystoviridae virions.


name: CAPSD_APRVF Putative major capsid protein VP3 (sprot)


T=2 icosahedral viral capsid

description: The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=2 symmetry. The T=2 capsid is composed of 12 pentameric dimers.


name: RDRP_APRVF RNA-directed RNA polymerase VP2 (sprot)


name: VP1_APRVF Putative structural protein VP1 (sprot)


name: D4QF72_APBV1 Major virion protein (trembl)


name: D4QF73_APBV1 Minor virion protein (trembl)


name: D4QF74_APBV1 Minor virion protein (trembl)


name: D4QF75_APBV1 Minor virion protein (trembl)


name: D4QF78_APBV1 Uncharacterized protein (trembl)


host cell junction

description: A plasma membrane part that forms a specialized region of connection between two host cells or between a host cell and the host extracellular matrix. At a host cell junction, anchoring proteins extend through the host plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.


host cell plasmodesma

description: A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one host cell to that of an adjacent host cell.


name: A0A1S6PCS2_9VIRU Readthrough protein (trembl)


serine-type exopeptidase activity

description: Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).


name: T2FEJ9_9POLY Minor capsid protein VP2 (trembl)


name: T2FFC5_9POLY Major capsid protein VP1 (trembl)


name: T2FFJ0_9POLY Minor capsid protein (trembl)


name: A0A0B5GDD0_9REOV Non-structural protein NS2 (trembl)


name: A0A0B5GGK4_9REOV Core protein VP4 (trembl)


name: A0A0B5GPD2_9REOV RNA-directed RNA polymerase (trembl)


name: A0A0B5GT51_9REOV Outer capsid protein VP2 (trembl)


name: B1PJ62_9REOV Membrane bound protein (trembl)


name: B4UUP0_9REOV Outer capsid protein VP5 (trembl)


adhesion of symbiont to host cell

description: The attachment of a symbiont to a host cell via adhesion molecules, general stickiness etc., either directly or indirectly.


name: W5ZZ53_9REOV Inner capsid protein (trembl)


name: C1BEG0_9VIRU Movement protein TGB2 (trembl)


name: C1BEG1_9VIRU Movement protein TGBp3 (trembl)


name: Q8UZK2_9VIRU RNA-dependent RNA polymerase (trembl)


name: A0A0B5JFR5_9NIDO GP3 envelope protein (trembl)


name: A0A0B5JKI0_9NIDO GP4 glycoprotein (trembl)


name: A0A0B5JQL0_9NIDO GP5 glycosylated envelope protein (trembl)


name: A0A0B5JQL5_9NIDO Replicase polyprotein 1ab (trembl)


name: host cell perinuclear region of cytoplasm

description: The host cell cytoplasm situated near, or occurring around, the host nucleus.


name: A0A0B5JWP0_9NIDO GP2 glycosylated envelope protein (trembl)


name: A0A0B5JWP6_9NIDO Envelope protein M (trembl)


name: 148R_ASFB7 Uncharacterized membrane protein EP148R (sprot)


name: PNG3_ASFB7 Uncharacterized membrane protein pNG3 (sprot)


name: PNG4_ASFB7 Uncharacterized membrane protein pNG4 (sprot)


name: PNG6_ASFB7 Uncharacterized membrane protein pNG6 (sprot)


name: host cell endoplasmic reticulum-Golgi intermediate compartment

description: A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.


host cell cytosol

description: The part of the host cell cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.


taxis

description: The directed movement of a motile cell or organism in response to an external stimulus.


name: P22_ASFB7 Inner membrane protein p22 (sprot)


name: I329L_ASFB7 Transmembrane protein I329L (sprot)


name: symbiont-mediated suppression of host toll-like receptor signaling pathway

description: A process in which a symbiont interferes with, inhibits or disrupts a toll-like receptor signaling pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.


host cell Golgi membrane

description: The lipid bilayer surrounding any of the compartments of the host cell Golgi apparatus.


name: VF73R_ASFB7 Uncharacterized protein I73R (sprot)


name: TFIIS_ASFB7 Transcription factor TFIIS homolog (sprot)


name: UBC_ASFB7 Ubiquitin-conjugating enzyme E2 (sprot)


name: DIPP_ASFB7 mRNA-decapping protein g5R (sprot)


name: symbiont-mediated suppression of host gene expression

description: A process in which a symbiont inhibits or disrupts expression of genes in its host. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form. The host is defined as the larger of the organisms involved in a symbiotic interaction.


host cell rough endoplasmic reticulum

description: The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host rough ER has ribosomes adhering to the outer surface.


name: P12_ASFB7 Inner membrane protein p12 (sprot)


name: endocytosis involved in viral entry into host cell

description: Any endocytosis that is involved in the uptake of a virus into a host cell.


name: RPB6_ASFB7 DNA-directed RNA polymerase RPB6 homolog (sprot)


name: ARBH_ASFB7 Apoptosis regulator Bcl-2 homolog (sprot)


apoptotic process

description: A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.


name: symbiont-mediated suppression of host apoptosis

description: A process in which a symbiont inhibits or disrupts the normal execution of host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.


suppression by virus of host autophagy

description: Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of autophagy in the host.


regulation of apoptotic process

description: Any process that modulates the occurrence or rate of cell death by apoptotic process.


name: symbiont-mediated perturbation of host apoptosis

description: A process in which a symbiont gene product affects host apoptosis, leading to a change in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: RPB1_ASFB7 DNA-directed RNA polymerase RPB1 homolog (sprot)


DNA-templated viral transcription

description: A transcription process that uses a viral DNA as a template.


name: RPB2_ASFB7 DNA-directed RNA polymerase RPB2 homolog (sprot)


name: RPB10_ASFB7 DNA-directed RNA polymerase RPB10 homolog (sprot)


name: RIR1_ASFB7 Ribonucleoside-diphosphate reductase large subunit (sprot)


name: RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain (sprot)


name: PK1_ASFB7 Serine/threonine-protein kinase 1 (sprot)


regulation of mitotic cell cycle

description: Any process that modulates the rate or extent of progress through the mitotic cell cycle.


name: DPOLX_ASFB7 Repair DNA polymerase X (sprot)


name: VHLP_ASFB7 Viral histone-like protein (sprot)


host cell endoplasmic reticulum lumen

description: The volume enclosed by the membranes of the host cell endoplasmic reticulum.


name: IAP_ASFB7 Inhibitor of apoptosis protein (sprot)


name: VPRT_ASFB7 Cysteine protease S273R (sprot)


name: VF137_ASFB7 Structural protein A137R (sprot)


name: symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of TBK1 activity

description: Any process in which a symbiont stops, prevents, or reduces a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of a host serine/threonine kinase TBK1.


name: VF84_ASFB7 Transmembrane protein EP84R (sprot)


name: VF421_ASFB7 Uncharacterized protein K421R (sprot)


name: VF145_ASFB7 Uncharacterized protein K145R (sprot)


viral capsid assembly

description: The assembly of a virus capsid from its protein subunits.


name: VF69R_ASFB7 Uncharacterized membrane protein X69R (sprot)


name: symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT1 activity

description: A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host STAT1 (signal transducer and activator of transcription 1).


name: symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT2 activity

description: A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host STAT2 (signal transducer and activator of transcription 2).


name: VF118_ASFB7 Uncharacterized protein A118R (sprot)


name: VF859_ASFB7 Probable helicase A859L (sprot)


name: VF317_ASFB7 Uncharacterized protein F317L (sprot)


name: VF165_ASFB7 Uncharacterized protein F165R (sprot)


name: PRIM_ASFB7 Putative helicase/primase complex protein (sprot)


name: VF205_ASFB7 Uncharacterized protein K205R (sprot)


induction by virus of host autophagy

description: Any process in which a virus activates or increases the frequency, rate or extent of autophagy in the host.


name: VF424_ASFB7 Probable methyltransferase EP424R (sprot)


name: VF152_ASFB7 Uncharacterized protein EP152R (sprot)


name: EP153_ASFB7 Lectin-like protein EP153R (sprot)


external side of plasma membrane

description: The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.


name: VF364_ASFB7 ERCC4 domain-containing protein EP364R (sprot)


name: M1249_ASFB7 Minor capsid protein M1249L (sprot)


name: symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity

description: A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of host IRF3 (interferon regulatory factor-3). IRF3 is a transcription factor in the RIG-I/MDA-5 signaling pathway. Viral infection triggers phosphorylation of cytoplasmic IRF3, which allows IRF3 to form a homodimer, migrate to the nucleus, and activate transcription of IFN-alpha and IFN-beta genes.


name: VF129_ASFB7 Uncharacterized protein C129R (sprot)


name: VF717_ASFB7 Uncharacterized protein C717R (sprot)


name: VF122_ASFB7 Uncharacterized protein C122R (sprot)


name: VF257_ASFB7 Transmembrane protein C257L (sprot)


name: PAP1_ASFB7 Putative poly(A) polymerase catalytic subunit (sprot)


name: H962R_ASFB7 Putative primase C962R (sprot)


name: FLSO_ASFB7 FAD-linked sulfhydryl oxidase (sprot)


dimethylallyltranstransferase activity

description: Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate.


farnesyltranstransferase activity

description: Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate.


geranyltranstransferase activity

description: Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-trans,6-trans-farnesyl diphosphate + diphosphate.


prenyltransferase activity

description: Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).


name: geranylfarnesyl diphosphate synthase activity

description: Catalysis of the reaction: geranylgeranyl diphosphate + isopentenyl diphosphate = (2E,6E,10E,14E)-geranylfarnesyl diphosphate + diphosphate.


isoprenoid biosynthetic process

description: The chemical reactions and pathways resulting in the formation of an isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.


name: geranyl diphosphate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of geranyl diphosphate.


name: geranylgeranyl diphosphate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of geranylgeranyl diphosphate.


name: farnesyl diphosphate biosynthetic process

description: The chemical reactions and pathways resulting in the formation of farnesyl diphosphate.


name: P49_ASFB7 Minor capsid protein p49 (sprot)


name: VF169_ASFB7 Transmembrane protein B169L (sprot)


name: VF475_ASFB7 Uncharacterized protein B475L (sprot)


name: VF385_ASFB7 Zinc finger protein B385R (sprot)


name: VF117_ASFB7 Uncharacterized protein B117L (sprot)


name: VF175_ASFB7 Uncharacterized protein B175L (sprot)


name: VFB66_ASFB7 Transmembrane protein B66L (sprot)


name: ETFL_ASFB7 Early transcription factor large subunit homolog (sprot)


name: VF123_ASFB7 Uncharacterized protein CP123L (sprot)


name: VF312_ASFB7 Uncharacterized protein CP312R (sprot)


name: RPB5_ASFB7 DNA-directed RNA polymerase RPB5 homolog (sprot)


name: RPB3_ASFB7 DNA-directed RNA polymerase RPB3-11 homolog (sprot)


name: VF171_ASFB7 Uncharacterized protein H171R (sprot)


name: VF124_ASFB7 Uncharacterized protein H124R (sprot)


name: VF108_ASFB7 Inner membrane protein H108R (sprot)


name: CAPSP_ASFB7 Penton protein H240R (sprot)


name: VF509_ASFB7 Putative ATP-dependent RNA helicase QP509L (sprot)


cysteine desulfurase activity

description: Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.


iron-sulfur cluster assembly

description: The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.


name: VF184_ASFB7 Uncharacterized protein E184L (sprot)


name: P54_ASFB7 Inner membrane protein p54 (sprot)


name: microtubule-dependent intracellular transport of viral material towards cell periphery

description: The directed movement of the viral genome or a viral particle towards the cell periphery using host microtubules. Mostly used by viruses that replicate their genome near or in the nucleus to allows newly assembled viral progeny to reach the plasma membrane.


host cell

description: A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.


name: VF423_ASFB7 Uncharacterized protein E423R (sprot)


name: VF301_ASFB7 Uncharacterized protein E301R (sprot)


name: VF146_ASFB7 Uncharacterized protein E146L (sprot)


name: VF199_ASFB7 Inner membrane protein E199L (sprot)


name: DUTP_ASFB7 Deoxyuridine 5'-triphosphate nucleotidohydrolase (sprot)


name: E248R_ASFB7 Inner membrane protein pE248R (sprot)


viral inner membrane

description: The lipid bilayer of a virion contained inside the protein capsid.


name: APE_ASFB7 Probable AP endonuclease (sprot)


viral DNA repair

description: The process of restoring viral DNA after damage or errors in replication.


name: VFE66_ASFB7 Host translation inhibitor E66L (sprot)


name: symbiont-mediated perturbation of host cell cycle G0/G1 transition checkpoint

description: A process in which a symbiont interferes with the normal execution of the host cell G0/G1 transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction. Some viruses benefit from keeping cells in resting state (G0), while others favor entry through G1 and subsequent cell division to replicate more efficiently.


name: symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity

description: A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by inhibiting the activity of RIG-1 (also known as DDX58). The cytoplasmic pattern recognition RIG-I recognizes viral RNA synthesized during active viral replication and signals to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.


name: protein serine/threonine phosphatase inhibitor activity

description: Binds to and stops, prevents or reduces the activity of a serine/threonine protein phosphatase, an enzyme that catalyzes the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate.


protein phosphatase regulator activity

description: Binds to and modulates the activity of a protein phosphatase.


name: symbiont-mediated suppression of host translation initiation

description: A process in which a symbiont inhibits or disrupts translation initiation in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.


protein phosphatase type 1 complex

description: A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity.


name: DP96R_ASFB7 TBK1 inhibitor DP96R (sprot)


name: DP60R_ASFB7 Uncharacterized protein DP60R (sprot)


name: P17_ASFB7 Minor capsid protein p17 (sprot)


name: H962L_ASFB7 Putative RNA helicase B962L (sprot)


name: symbiont-mediated suppression of host adaptive immune response

description: A process by which a symbiont inhibits or disrupts the normal execution of the adaptive immune response of the host organism, an immune response based on directed amplification of specific receptors for antigen produced through a somatic diversification process, and allowing for enhanced response to subsequent exposures to the same antigen (immunological memory).


name: ETFS_ASFB7 Early transcription factor large subunit homolog (sprot)


name: TFNPH_ASFB7 Termination factor NPH-I homolog (sprot)


name: P10_ASFB7 Structural DNA-binding protein p10 (sprot)


virion nucleoid

description: The region of a virion in which the nucleic acid is confined.


name: VF93L_ASFB7 Uncharacterized membrane protein KP93L/DP93R (sprot)


name: RPB7_ASFB7 DNA-directed RNA polymerase RPB7 homolog (sprot)


name: A0A8D9PGS6_9RHAB RNA-directed RNA polymerase (trembl)


modulation by virus of host process

description: The process in which a virus effects a change in the structure or processes of its host organism.


name: negative regulation of gene silencing by regulatory ncRNA

description: Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.


viral penetration into host nucleus

description: The crossing by the virus of the host nuclear membrane, either as naked viral genome or for small viruses as an intact capsid.


name: D1GV13_9GEMI Replication enhancer (trembl)


name: D1GV14_9GEMI Transcriptional activator protein (trembl)


name: D1GV15_9GEMI Replication-associated protein (trembl)


name: E5AZV9_9VIRU Replication associated protein (trembl)


name: E3W7F2_9GEMI Replication enhancer (trembl)


name: E3W7F3_9GEMI Transcriptional activator protein (trembl)


name: E3W7F4_9GEMI Replication-associated protein (trembl)


name: Q5W1N1_9GEMI Replication-associated protein (trembl)


name: Q5W1N2_9GEMI Transcriptional activator protein (trembl)


name: Q5W1N3_9GEMI Replication enhancer (trembl)


name: Q9DXI0_9GEMI Replication-associated protein (trembl)


name: Q9DXI1_9GEMI Transcriptional activator protein (trembl)


name: Q9DXI2_9GEMI Replication enhancer (trembl)


name: B6D5S3_9ABAC Occlusion-derived virus envelope protein ODV-E56 (trembl)


name: B6D5S5_9ABAC Uncharacterized protein (trembl)


name: B6D5S6_9ABAC Envelope fusion protein (trembl)


name: B6D5T1_9ABAC Late expression factor-2 (trembl)


name: B6D5T2_9ABAC Uncharacterized protein (trembl)


name: B6D5T8_9ABAC Uncharacterized protein (trembl)


name: B6D5U5_9ABAC Protein tyrosine phosphatase-2 (trembl)


name: B6D5U6_9ABAC Ecdysteroid UDP-glucosyltransferase (trembl)


name: B6D5U9_9ABAC Uncharacterized protein (trembl)


name: B6D5V2_9ABAC Protein kinase interacting protein-1 (trembl)


name: B6D5V5_9ABAC Actin rearrangement inducing factor-1 (trembl)


name: B6D5V6_9ABAC Per os infectivity factor-2 (trembl)


name: B6D5V7_9ABAC Per os infectivity factor-1 (trembl)


name: B6D5V9_9ABAC Fibroblast growth factor (trembl)


name: fibroblast growth factor receptor binding

description: Binding to a fibroblast growth factor receptor (FGFR).


growth factor activity

description: The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation.


name: positive regulation of protein phosphorylation

description: Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.


name: positive regulation of cell population proliferation

description: Any process that activates or increases the rate or extent of cell proliferation.


name: fibroblast growth factor receptor signaling pathway

description: The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands.


positive regulation of gene expression

description: Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).


regulation of cell migration

description: Any process that modulates the frequency, rate or extent of cell migration.


name: B6D5W0_9ABAC Uncharacterized protein (trembl)


name: B6D5W1_9ABAC Alkaline exonuclease (trembl)


name: B6D5W6_9ABAC ribonucleoside-diphosphate reductase (trembl)


name: B6D5W8_9ABAC Polyhedral envelope protein (trembl)


name: B6D5X1_9ABAC Superoxide dismutase (trembl)


name: B6D5X3_9ABAC Per os infectivity factor-3 (trembl)


name: B6D5X5_9ABAC Poly (ADP-ribose) glycohydrolase (PARG) catalytic domain-containing protein (trembl)


description: Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.


regulation of DNA repair

description: Any process that modulates the frequency, rate or extent of DNA repair.


name: B6D5X7_9ABAC Histidinol phosphatase (trembl)


name: B6D5X8_9ABAC dUTP diphosphatase (trembl)


name: B6D5Y5_9ABAC Occlusion-derived virus envelope protein ODV-E66 (trembl)


name: B6D5Y6_9ABAC Uncharacterized protein (trembl)


name: B6D5Y7_9ABAC Occlusion-derived virus envelope protein ODV-EC43 (trembl)


name: B6D5Z4_9ABAC Late expression factor-5 (trembl)


name: B6D5Z6_9ABAC Viral enhancing factor-2 (trembl)


name: B6D5Z9_9ABAC Putative occlusion-derived envelope protein ODV-E28 (trembl)


name: B6D601_9ABAC Occlusion-derived virus envelope protein ODV-E25 (trembl)


name: B6D604_9ABAC RING-type domain-containing protein (trembl)


protein autoubiquitination

description: The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink.


name: B6D605_9ABAC Late expression factor-4 (trembl)


name: B6D606_9ABAC Major capsid protein (trembl)


name: B6D613_9ABAC Very late expression factor-1 (trembl)


name: B6D615_9ABAC Inhibitor of apoptosis-2 (trembl)


name: B6D616_9ABAC RrmJ-type SAM-dependent 2'-O-MTase domain-containing protein (trembl)


name: B6D618_9ABAC Late expression factor-3 (trembl)


name: B6D620_9ABAC DNA-directed DNA polymerase (trembl)


name: B6D627_9ABAC Late expression factor-9 (trembl)


name: B6D642_9ABAC Inhibitor of apoptosis-3 (trembl)


name: B6D644_9ABAC DNA-directed RNA polymerase (trembl)


name: B6D647_9ABAC Occlusion-derived virus envelope protein ODV-E66 (trembl)


name: B6D652_9ABAC Late expression factor 11 (trembl)


name: B6D669_9ABAC Chitin-binding type-2 domain-containing protein (trembl)


name: B6D670_9ABAC Occlusion-derived virus envelope protein ODV-EC27 (trembl)


name: B6D671_9ABAC Uncharacterized protein (trembl)


name: B6D672_9ABAC Occlusion-derived virus envelope protein ODV-E18 (trembl)


name: B6D677_9ABAC Ribonucleoside-diphosphate reductase (trembl)


name: A0A023MHE8_GVAS Uncharacterized protein (trembl)


name: A0A023MHF9_GVAS DNA-directed DNA polymerase (trembl)


name: A0A023MHG8_GVAS Uncharacterized protein (trembl)


name: A0A023MI73_GVAS Late expression factor 11 (trembl)


name: A0A023MI89_GVAS Uncharacterized protein (trembl)


name: structural constituent of presynaptic active zone

description: The action of a molecule that contributes to the structural integrity of a presynaptic active zone.


regulation of synaptic plasticity

description: A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.


name: maintenance of presynaptic active zone structure

description: A process which maintains the organization and the arrangement of proteins at the active zone to ensure the fusion and docking of vesicles and the release of neurotransmitters.


cytoskeleton

description: A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.


name: A0A023MIE0_GVAS Uncharacterized protein (trembl)


name: A0A023MIK1_GVAS Viral cathepsin (trembl)


name: Q6QXF7_GVAS ribonucleoside-diphosphate reductase (trembl)


name: Q6QXI9_GVAS Ecdysteroid UDP-glucosyltransferase (trembl)


name: Q287B9_NPVAS Ribonucleoside-diphosphate reductase (trembl)


name: Q287E1_NPVAS Late expression factor 11 (trembl)


name: Q287H2_NPVAS DNA-directed DNA polymerase (trembl)


name: Q287L0_NPVAS dUTP diphosphatase (trembl)


name: Q287M5_NPVAS ribonucleoside-diphosphate reductase (trembl)


name: Q287N1_NPVAS Alkaline exonuclease (trembl)


name: Q287P4_NPVAS Ecdysteroid UDP-glucosyltransferase (trembl)


name: Q287R9_NPVAS non-specific serine/threonine protein kinase (trembl)


name: F4ZCK0_9VIRU Envelopment polyprotein (trembl)


name: fusion of virus membrane with host endosome membrane

description: Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.


name: F4ZCK1_9VIRU RNA-directed RNA polymerase L (trembl)


name: symbiont-mediated perturbation of host ubiquitin-like protein modification

description: A process by which a symbiont alters ubiquitin-like protein modification of target proteins of either host or symbiont proteins. This includes ubiquitination, SUMOylation, NEDDylation, and ISG15ylation. The ubiquitination status of a protein  affects whether it is targeted to the proteasome for degradation. The host is defined as the larger of the organisms involved in a symbiotic interaction.


name: A0A220IGE2_9PAPI Replication protein E1 (trembl)


name: A0A220IGE4_9PAPI Minor capsid protein L2 (trembl)


name: microtubule-dependent intracellular transport of viral material towards nucleus

description: The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.


host cell endosome

description: A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to host cell lysosomes for degradation.


name: A0A220IGE5_9PAPI Regulatory protein E2 (trembl)


name: A0A220IGF5_9PAPI Major capsid protein L1 (trembl)


T=7 icosahedral viral capsid

description: The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=7 symmetry. The T=7 capsid is composed of 12 pentameric and 60 hexameric capsomeres.


protein domain specific binding

description: Binding to a specific domain of a protein.


name: A0A220IGE7_9PAPI Regulatory protein E2 (trembl)


name: A0A220IGE8_9PAPI Replication protein E1 (trembl)


name: A0A220IGG0_9PAPI Minor capsid protein L2 (trembl)


name: A0A220IGG3_9PAPI Major capsid protein L1 (trembl)


name: A0A0K1RL37_9CIRC Putative replication initiation protein (Fragment) (trembl)


name: A0A3G6V9C9_9CLOS ORF1a polyprotein (trembl)


name: H9U336_9VIRU Envelopment polyprotein (trembl)


name: I0E0B7_9VIRU RNA-directed RNA polymerase L (trembl)


name: VGA4_ALHV1 Uncharacterized gene A4 protein (sprot)


name: DNBI_ALHV1 Major DNA-binding protein (sprot)


name: TRM1_ALHV1 Tripartite terminase subunit 1 (sprot)


viral DNA genome packaging

description: The packing of viral DNA into a capsid.


name: GB_ALHV1 Envelope glycoprotein B (sprot)


host cell endosome membrane

description: The lipid bilayer surrounding a host cell endosome.


name: DPOL_ALHV1 DNA polymerase catalytic subunit (sprot)


name: VGA5_ALHV1 G-protein coupled receptor A5 (sprot)


G protein-coupled receptor activity

description: Combining with an extracellular signal and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.


name: G protein-coupled receptor signaling pathway

description: The series of molecular signals initiated by a ligand binding to its receptor, in which the activated receptor promotes the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, and ends with regulation of a downstream cellular process. The pathway can start from the plasma membrane, Golgi or nuclear membrane.


name: SCAF_ALHV1 Capsid scaffolding protein (sprot)


viral release from host cell

description: The dissemination of mature viral particles from a host cell, e.g. by cell lysis or the budding of virus particles from the cell membrane.


name: CVC2_ALHV1 Capsid vertex component 2 (sprot)


viral genome packaging

description: The encapsulation of the viral genome within the capsid.


TMP biosynthetic process

description: The chemical reactions and pathways resulting in the formation of TMP, ribosylthymine monophosphate.


name: GH_ALHV1 Envelope glycoprotein H (sprot)


T=16 icosahedral viral capsid

description: The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=16 symmetry. The T=16 capsid is composed of 12 pentameric and 150 hexameric capsomeres.


name: TRX2_ALHV1 Triplex capsid protein 2 (sprot)


name: VG27_ALHV1 Uncharacterized gene 27 protein (sprot)


name: TRM3_ALHV1 Tripartite terminase subunit 3 (sprot)


name: CVC1_ALHV1 Capsid vertex component 1 (sprot)


name: CEP2_ALHV1 Cytoplasmic envelopment protein 2 (sprot)


viral tegument

description: A structure lying between the capsid and envelope of a virus, varying in thickness and often distributed asymmetrically.


name: VG36_ALHV1 Putative tyrosine kinase 36 (sprot)


protein tyrosine kinase activity

description: Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.


name: non-membrane spanning protein tyrosine kinase activity

description: Catalysis of the reaction: ATP + protein L-tyrosine = ADP + protein L-tyrosine phosphate by a non-membrane spanning protein.


name: AN_ALHV1 Shutoff alkaline exonuclease (sprot)


name: symbiont-mediated degradation of host mRNA

description: The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).


name: CEP3_ALHV1 Cytoplasmic envelopment protein 3 (sprot)


viral budding from Golgi membrane

description: A viral budding that starts with formation of a membrane curvature in the host Golgi membrane.


name: GM_ALHV1 Envelope glycoprotein M (sprot)


host cell nuclear inner membrane

description: The inner, i.e. lumen-facing, lipid bilayer of the host nuclear envelope.


name: VG40_ALHV1 Uncharacterized gene 40 protein (sprot)


name: CEP1_ALHV1 Cytoplasmic envelopment protein 1 (sprot)


name: HELI_ALHV1 DNA replication helicase (sprot)


name: UNG_ALHV1 Uracil-DNA glycosylase (sprot)


name: GL_ALHV1 Envelope glycoprotein L (sprot)


name: BRLF1_ALHV1 Putative transcription activator BRLF1 homolog (sprot)


name: VGA7_ALHV1 Putative C-type lectin protein A7 (sprot)


name: VGA8_ALHV1 Uncharacterized gene A8 protein (sprot)


name: GN_ALHV1 Envelope glycoprotein N (sprot)


name: DUT_ALHV1 Deoxyuridine 5'-triphosphate nucleotidohydrolase (sprot)


dUTP metabolic process

description: The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.


name: TEG7_ALHV1 Tegument protein UL51 homolog (sprot)


name: bidirectional double-stranded viral DNA replication

description: A viral DNA replication process where replication occurs in both directions from the starting point. This creates two replication forks, moving in opposite directions.


name: IE63_ALHV1 Immediate-early phosphoprotein 57 (sprot)


name: VG59_ALHV1 DNA polymerase processivity factor (sprot)


name: RIR2_ALHV1 Ribonucleoside-diphosphate reductase small subunit (sprot)


viral latency

description: The process by which, after initial infection, a virus lies dormant within a cell and viral production ceases. The process ends when the virus switches from latency and starts to replicate.


release from viral latency

description: The process by which a virus begins to replicate following a latency replication decision (switch).


name: RIR1_ALHV1 Ribonucleoside-diphosphate reductase large subunit (sprot)


name: TRX1_ALHV1 Triplex capsid protein 1 (sprot)


name: ITP_ALHV1 Inner tegument protein (sprot)


name: LTP_ALHV1 Large tegument protein deneddylase (sprot)


name: SCP_ALHV1 Small capsomere-interacting protein (sprot)


name: UL49_ALHV1 Uncharacterized gene 66 protein (sprot)


name: NEC2_ALHV1 Nuclear egress protein 2 (sprot)


name: TRM2_ALHV1 Tripartite terminase subunit 2 (sprot)


name: UL32_ALHV1 Packaging protein UL32 homolog (sprot)


name: NEC1_ALHV1 Nuclear egress protein 1 (sprot)


viral budding from nuclear membrane

description: A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.


name: exit of virus from host cell nucleus by nuclear egress

description: The directed movement of an assembled viral particle out of the host cell nucleus by budding and fusion through the nuclear membranes. In this process, enveloped viral particles are formed by budding through the inner nuclear membrane. These perinuclear enveloped particles then fuse with the outer nuclear membrane to deliver a naked capsid into the host cytoplasm.


name: VP75_ALHV1 Probable membrane antigen 75 (sprot)


intracellular transport of virus

description: The directed movement of a virus, or part of a virus, within the host cell.


name: VGA9_ALHV1 Putative apoptosis regulator A9 (sprot)


name: VGA10_ALHV1 Uncharacterized gene A10 protein (sprot)


name: VGA2_ALHV1 Uncharacterized protein A2 (sprot)


name: VP03_ALHV1 Probable tegument protein antigen 3 (sprot)


name: SEMA_ALHV1 Semaphorin-like protein A3 (sprot)


integrin binding

description: Binding to an integrin.


semaphorin receptor binding

description: Binding to a semaphorin receptor.


chemorepellent activity

description: Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal.


integrin-mediated signaling pathway

description: The series of molecular signals initiated by an extracellular ligand binding to an integrin on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.


axon guidance

description: The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.


positive regulation of cell migration

description: Any process that activates or increases the frequency, rate or extent of cell migration.


positive regulation of axon extension

description: Any process that activates or increases the frequency, rate or extent of axon extension.


name: negative regulation of axon extension involved in axon guidance

description: Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in axon guidance.


regulation of inflammatory response

description: Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents.


negative chemotaxis

description: The directed movement of a motile cell or organism towards a lower concentration of a chemical.


name: positive regulation of macrophage cytokine production

description: Any process that increases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


name: positive regulation of ERK1 and ERK2 cascade

description: Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.


semaphorin-plexin signaling pathway

description: The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand.


name: A0A2Z5CK43_9VIRU Replication associated protein (trembl)


name: A0A2Z5CJA5_9VIRU Replication associated protein (trembl)


name: A0A2Z5CJA2_9VIRU Replication associated protein (trembl)


name: A0A2Z5CK60_9VIRU Replication-associated protein (trembl)


name: MEM_GOGV Putative membrane protein (sprot)


name: symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of IKBKE activity

description: A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by reducing the activity of host I-kappa-B kinase epsilon (IKBKE/IKK-epsilon/IKK-E).


name: L_GOGV RNA-directed RNA polymerase L (sprot)


cap snatching

description: A transcription initiation process during which a nucleotide sequence between 10 and 20 nucleotides in size is cleaved from the 5' end of host mRNAs by a viral RNA-dependent polymerase. The capped leader sequence obtained is subsequently used to prime transcription on the viral genome, which ultimately leads to the synthesis of capped, translatable viral mRNAs.


viral replication complex

description: Specific locations and structures in the virus infected cell involved in replicating the viral genome.


name: NS2_ADVG Non-structural protein NS2 (sprot)


name: NS3_ADVG Non-structural protein NS3 (sprot)


name: A0A0C5GVW6_9VIRU Capsid protein (trembl)


name: A0A0C5GWS6_9VIRU Movement protein TGBp3 (trembl)


name: A0A0C5H7M3_9VIRU RNA-dependent RNA polymerase (trembl)


name: Q913Z7_9VIRU Movement protein TGB2 (trembl)


name: A0A0K0PRX7_9GEMI Replication-associated protein (trembl)


name: A0A0K0PSZ7_9GEMI Replication-associated protein (trembl)


name: RDRP_AMVLE RNA-directed RNA polymerase 2a (sprot)


positive stranded viral RNA replication

description: A viral genome replication process where the template genome is positive stranded, single stranded RNA ((+)ssRNA). Replication of the positive strand leads to dsRNA formation, which in turn is transcribed into positive single stranded RNA.


name: A0A1X9PY58_9VIRU Movement protein TGBp3 (trembl)


name: C0L9E1_9VIRU RNA replication protein (trembl)


name: C0L9E4_9VIRU Movement protein TGBp3 (trembl)


name: A0A024A1N5_9RHAB Virion transmembrane glycoprotein G (trembl)


name: Q65A77_9VIRU RNA-directed RNA polymerase (trembl)


name: Q65A78_9VIRU Putative coat protein (trembl)


name: A0A0U1UZ37_9ALPC Spike glycoprotein (trembl)


name: receptor-mediated virion attachment to host cell

description: The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface.


name: A0A0U1WHF8_9ALPC Membrane protein (trembl)


name: A0A0U1WHG4_9ALPC ORF1ab polyprotein (trembl)


omega peptidase activity

description: Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.


5'-3' DNA helicase activity

description: Unwinding a DNA helix in the 5' to 3' direction, driven by ATP hydrolysis.


name: A0A0U1WHG6_9ALPC Uncharacterized protein (trembl)


name: A0A0U1WJX0_9ALPC Small envelope protein (trembl)


name: A0A6G9LUF7_9POLY Minor capsid protein VP2 (trembl)


name: A0A6G9LUG9_9POLY Large T antigen (trembl)


name: A0A6G9LWU8_9POLY Small T antigen (trembl)


name: A0A6G9LXA2_9POLY Viral protein 1 (trembl)


name: A0A5J6XVL7_9POLY Middle T antigen (trembl)


name: K7QJJ1_9POLY Capsid protein VP1 (trembl)


name: K7QKH3_9POLY Minor capsid protein (trembl)


name: Q3V6G4_9VIRU Movement protein TGBp3 (trembl)


name: Q3V6G5_9VIRU Triple gene block protein 2 (trembl)


name: Q3V6G6_9VIRU Triple gene block protein 1 (trembl)


name: Q3V6G7_9VIRU RNA replication protein (trembl)


name: Q2TJB0_9VIRU Triple gene block 1 protein 26k (trembl)


name: Q2TJB1_9VIRU RNA replication protein (trembl)


name: Q52Z67_9VIRU Movement protein TGBp3 (trembl)


name: Q4GZI5_9GEMI Replication-associated protein (trembl)


name: Q4GZI6_9GEMI Transcriptional activator protein (trembl)


name: Q4GZI7_9GEMI Replication enhancer (trembl)


name: A9CQL6_9VIRU RNA-directed RNA polymerase (trembl)


name: A0A146HTD0_9VIRU Putative coat protein (trembl)


name: A0A146HTF4_9VIRU RNA-directed RNA polymerase (trembl)


host cell cytoplasmic vesicle

description: A vesicle formed of membrane or protein, found in the cytoplasm of a host cell.


name: A0A076L0Y3_9VIRU RNA-dependent RNA polymerase (trembl)


name: Q65A75_9VIRU RNA-dependent RNA polymerase (trembl)


name: Q65A76_9VIRU Putative coat protein (trembl)


name: V5V0U1_9VIRU Putative triple gene block protein 1 (trembl)


name: V5V1N5_9VIRU Movement protein TGBp3 (trembl)


name: V5V1R1_9VIRU RNA replication protein (trembl)


name: V5V1S7_9VIRU Putative triple gene block protein 2 (trembl)


name: V5V388_9VIRU Putative coat protein (trembl)


name: I1W5T2_9VIRU Putative viral replicase (trembl)


name: I1W5T3_9VIRU Triple gene block protein 1 (trembl)


name: I1W5T4_9VIRU Movement protein TGB2 (trembl)


name: I1W5T5_9VIRU Movement protein TGBp3 (trembl)


name: I1W5T7_9VIRU RNA silencing suppressor (trembl)


name: Q997A3_9BROM RNA-directed RNA polymerase 2a (trembl)


name: Q997A4_9BROM Replication protein 1a (trembl)


name: A0A1P8YT73_9VIRU Replication associated protein (trembl)


name: A0A1P8YT80_9VIRU Replication-associated protein (trembl)


name: Y014_AMEPV Uncharacterized leucine-rich repeat-containing protein AMV014/Q3 (sprot)


name: positive regulation of Ras protein signal transduction

description: Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction.


name: NTP1_AMEPV Nucleoside triphosphatase I (sprot)


name: A28_AMEPV Envelope protein A28 homolog (sprot)


name: I7_AMEPV Core protease I7 homolog (sprot)


name: P87507_AMEPV DNA topoisomerase I (trembl)


transcription regulator complex

description: A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.


name: Q9EMH5_AMEPV Uracil-DNA glycosylase (trembl)


name: Q9EMI5_AMEPV DNA-directed RNA polymerase 147 kDa polypeptide (trembl)


name: NMT_AMEPV Putative glycylpeptide N-tetradecanoyltransferase (sprot)


name: Q9EMJ6_AMEPV Probable AP endonuclease (trembl)


name: Q9EMK1_AMEPV Viral late gene transcription factor 3 (trembl)


name: Q9EMK9_AMEPV non-specific serine/threonine protein kinase (trembl)


name: Q9EMP6_AMEPV Serine/threonine-protein kinase (trembl)


name: Q9EMQ2_AMEPV Virion core protein 4b (trembl)


name: Q9EMR4_AMEPV mRNA-capping enzyme catalytic subunit (trembl)


lipid transporter activity

description: Enables the directed movement of lipids into, out of or within a cell, or between cells.


ABC-type transporter activity

description: Primary active transporter characterized by two nucleotide-binding domains and two transmembrane domains. Uses the energy generated from ATP hydrolysis to drive the transport of a substance across a membrane.


lipid transport

description: The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.


name: Q9EMT0_AMEPV protein-serine/threonine phosphatase (trembl)


name: Q9EMT4_AMEPV Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase (trembl)


name: Q9EMT5_AMEPV Sulfhydryl oxidase (trembl)


name: Q9EMU4_AMEPV Early transcription factor 82 kDa subunit (trembl)


name: Q9EMW8_AMEPV RNA helicase NPH-II (trembl)


name: PTPH_AMEPV Putative tyrosine-protein phosphatase AMV078 (sprot)


name: Q9EMX8_AMEPV Entry-fusion complex protein OPG086 (trembl)


name: Q9EMY3_AMEPV DNA-directed RNA polymerase (trembl)


name: Q9EMY9_AMEPV Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase (trembl)


name: Q9EMZ0_AMEPV Transcript termination protein A18 (trembl)


name: Q9EMZ5_AMEPV RNA polymerase-associated transcription-specificity factor RAP94 (trembl)


name: Q9EN10_AMEPV Poly(A) polymerase catalytic subunit (trembl)


description: Catalysis of the reaction: S-adenosyl-L-methionine + trans-aconitate = (E)-3-(methoxycarbonyl)pent-2-enedioate + S-adenosyl-L-homocysteine.


name: Q9EN44_AMEPV Deoxyuridine 5'-triphosphate nucleotidohydrolase (trembl)


name: nicotinamide riboside transmembrane transporter activity

description: Enables the transfer of nicotinamide riboside, which is a pyridine-3-carboxamide covalently bonded to a ribose sugar, from one side of a membrane to the other.


nicotinamide riboside transport

description: The directed movement of a nicotinamide riboside, which is a pyridine-3-carboxamide covalently bonded to a ribose sugar, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


name: A1YZN4_9ALPH Tegument/envelope protein (trembl)


name: A1YZN8_9ALPH Membrane associated phosphoprotein (trembl)


name: A2TIU8_9ALPH Capsid triplex subunit 2 (trembl)


host cell nuclear membrane

description: Either of the lipid bilayers that surround the host nucleus and form the nuclear envelope; excludes the intermembrane space.


name: A2TIV6_9ALPH Small capsomere-interacting protein (trembl)


name: A2TIV8_9ALPH Capsid scaffolding protein (trembl)


name: A3RMA2_9ALPH Helicase-primase subunit (trembl)


name: A4GRK3_9ALPH Packaging protein UL32 (trembl)


name: A4ZX80_9ALPH Tegument protein VP22 (trembl)


name: A4ZX81_9ALPH Envelope glycoprotein (trembl)


name: A4ZX82_9ALPH Deoxyuridine triphosphatase (trembl)


name: A5A413_9ALPH Tegument serine/threonine protein kinase (trembl)


name: A9QXU7_9ALPH Envelope glycoprotein K (trembl)


name: fusion of viral membrane with host outer nuclear membrane

description: Fusion of a viral primary envelope with the host outer nuclear membrane during nuclear egress. The transitory primary envelope is acquired by the virus as it buds at the inner nuclear membrane and gains access to the perinuclear space. This membrane is lost by fusing with the host outer nuclear membrane during nuclear exit.


name: positive regulation of syncytium formation by virus

description: The process in which a virus increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.


host cell nuclear matrix

description: The dense fibrillar network lying on the inner side of the host nuclear membrane.


name: B4XS04_9ALPH Helicase-primase primase subunit (trembl)


name: B4XS28_9ALPH non-specific serine/threonine protein kinase (trembl)


name: B6E8Z2_9ALPH ribonucleoside-diphosphate reductase (trembl)


deNEDDylase activity

description: An isopeptidase activity that cleaves NEDD8 from a target protein to which it is conjugated.


name: C6ZD01_9ALPH DNA polymerase processivity factor (trembl)


name: C6ZD04_9ALPH Ribonucleoside-diphosphate reductase large subunit (trembl)


name: C6ZD35_9ALPH Replication origin-binding protein (trembl)


name: C6ZD38_9ALPH Envelope glycoprotein E (trembl)


anchoring junction

description: A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix.


name: E1U2A6_9ALPH Envelope glycoprotein I (trembl)


name: E1U2B0_9ALPH Multifunctional expression regulator (trembl)


name: E6Y393_9ALPH Helicase-primase helicase subunit (trembl)


name: E6Y398_9ALPH Tegument protein UL47 (trembl)


name: E6Y399_9ALPH Alpha trans-inducing protein (trembl)


name: H9DUZ2_9ALPH Virion host shutoff protein (trembl)


name: Q52NV0_9ALPH Minor capsid protein (trembl)


name: A0A088SG43_9GEMI Transcriptional activator protein (trembl)


name: A0A088SGC3_9GEMI Replication-associated protein (trembl)


name: A0A088SGJ4_9GEMI Capsid protein (trembl)


name: A0A088T1G4_9GEMI Replication enhancer (trembl)


name: A0A140GL60_9VIRU Virion-associated protein (trembl)