{
    "graph_id": "HGNC_Automat",
    "graph_name": "HGNC",
    "graph_description": "The HUGO Gene Nomenclature Committee (HGNC) database provides open access to HGNC-approved unique symbols and names for human genes, gene groups, and associated resources, including links to genomic, proteomic and phenotypic information.",
    "graph_url": "https://www.genenames.org/",
    "graph_version": "18d7d0e936fac5fe",
    "sources": [
        {
            "source_id": "HGNC",
            "source_version": "2026-02-03",
            "parsing_version": "1.5",
            "supplementation_version": "1.1",
            "normalization_scheme": {
                "node_normalization_version": "2025sep1",
                "edge_normalization_version": "v4.3.6",
                "normalization_code_version": "1.4",
                "conflation": false,
                "strict": true
            },
            "release_version": "492dce22645a2dea",
            "merge_strategy": null,
            "edge_merging_attributes": null,
            "edge_id_addition": false,
            "normalization_version": "2025sep1_v4.3.6_1.4_strict",
            "infores:hgnc": {
                "id": "infores:hgnc",
                "name": "HUGO Gene Nomenclature Committee (HGNC)",
                "description": "The HUGO Gene Nomenclature Committee (HGNC) database provides open access to HGNC-approved unique symbols and names for human genes, gene groups, and associated resources, including links to genomic, proteomic and phenotypic information.",
                "url": "https://www.genenames.org/",
                "attribution": "https://www.genenames.org/",
                "citation": "https://doi.org/10.1093/nar/gkac888",
                "license": "CC0",
                "contentUrl": "https://www.genenames.org/download/archive/",
                "fullCitation": "Seal RL, Braschi B, Gray K, Jones TEM, Tweedie S, Haim-Vilmovsky L, Bruford EA. Genenames.org: the HGNC resources in 2023. Nucleic Acids Res. 2023 Jan 6;51(D1):D1003-D1009. doi: 10.1093/nar/gkac888. PMID: 36243972; PMCID: PMC9825485."
            },
            "normalized_nodes.jsonl": {
                "nodes": 28348
            },
            "normalized_edges.jsonl": {
                "edges": 32801
            }
        },
        {
            "source_id": "OntologicalHierarchy",
            "source_version": "2025-11-02",
            "parsing_version": "1.5",
            "supplementation_version": "1.1",
            "normalization_scheme": {
                "node_normalization_version": "2025sep1",
                "edge_normalization_version": "v4.3.6",
                "normalization_code_version": "1.4",
                "conflation": false,
                "strict": true
            },
            "release_version": "e855b13b685fa645",
            "merge_strategy": "connected_edge_subset",
            "edge_merging_attributes": null,
            "edge_id_addition": false,
            "normalization_version": "2025sep1_v4.3.6_1.4_strict",
            "infores:ubergraph": {
                "id": "infores:ubergraph",
                "name": "Ubergraph Subclass Relationships",
                "description": "Subclass relationships from the redundant version of Ubergraph.",
                "url": "https://github.com/INCATools/ubergraph",
                "attribution": "https://github.com/INCATools/ubergraph",
                "citation": "https://doi.org/10.5281/zenodo.7249759",
                "license": "https://raw.githubusercontent.com/INCATools/ubergraph/master/LICENSE.txt",
                "contentUrl": "https://github.com/INCATools/ubergraph",
                "fullCitation": "Balhoff, J. P., Bayindir, U., Caron, A. R., Matentzoglu, N., Osumi-Sutherland, D., & Mungall, C. J. (2022, September 28). Ubergraph: integrating OBO ontologies into a unified semantic graph. ICBO 2022: International Conference on Biomedical Ontology (ICBO), Ann Arbor, Michigan, USA."
            },
            "normalized_edges.jsonl": {
                "edges": 0
            },
            "normalized_nodes.jsonl": {
                "nodes": 0
            }
        }
    ],
    "subgraphs": [],
    "build_status": "stable",
    "build_time": "2026-02-05T04:36:50",
    "build_error": null,
    "final_node_count": 28348,
    "final_edge_count": 32801,
    "merged_nodes": 0,
    "merged_edges": 0,
    "unmerged_edge_count": 0,
    "qc_results": {
        "pass": true,
        "warnings": {},
        "errors": {},
        "primary_knowledge_sources": [
            "infores:hgnc"
        ],
        "aggregator_knowledge_sources": [],
        "node_curie_prefixes": {
            "NCBIGene": 25981,
            "HGNC.FAMILY": 1756,
            "HGNC": 611
        },
        "node_types": [
            {
                "type": [
                    "biolink:Gene"
                ],
                "count": 26592
            },
            {
                "type": [
                    "biolink:GeneFamily"
                ],
                "count": 1756
            }
        ],
        "node_properties": [
            "category",
            "equivalent_identifiers",
            "id",
            "information_content",
            "location",
            "locus_group",
            "name",
            "symbol"
        ],
        "predicate_totals": {
            "biolink:has_part": 32801
        },
        "edges_with_publications": {
            "biolink:has_part": 21907
        },
        "edge_properties": [
            "agent_type",
            "knowledge_level",
            "object",
            "original_object",
            "original_subject",
            "predicate",
            "primary_knowledge_source",
            "publications",
            "subject"
        ],
        "s-p-o_types": [
            {
                "subject_type": [
                    "biolink:Gene"
                ],
                "predicate": "biolink:has_part",
                "object_type": [
                    "biolink:GeneFamily"
                ],
                "count": 32801
            }
        ],
        "source_breakdown": [
            {
                "aggregator": [
                    null
                ],
                "breakdown": {
                    "infores:hgnc": {
                        "node_count": 28348,
                        "edge_count": 32801,
                        "subject_prefixes": {
                            "NCBIGene": 32188,
                            "HGNC": 613
                        },
                        "subject_types": [
                            {
                                "type": [
                                    "biolink:Gene"
                                ],
                                "count": 32801
                            }
                        ],
                        "predicates": {
                            "biolink:has_part": 32801
                        },
                        "object_prefixes": {
                            "HGNC.FAMILY": 32801
                        },
                        "object_types": [
                            {
                                "type": [
                                    "biolink:GeneFamily"
                                ],
                                "count": 32801
                            }
                        ],
                        "s-p-o_types": [
                            {
                                "subject_type": [
                                    "biolink:Gene"
                                ],
                                "predicate": "biolink:has_part",
                                "object_type": [
                                    "biolink:GeneFamily"
                                ],
                                "count": 32801
                            }
                        ]
                    }
                }
            }
        ],
        "predicates_by_knowledge_source": {
            "infores:hgnc": {
                "biolink:has_part": 32801
            }
        }
    },
    "memgraph_dump": "https://stars.renci.org/var/plater/graphs/HGNC_Automat/18d7d0e936fac5fe/memgraph.cypher",
    "neo4j_dump": "https://stars.renci.org/var/plater/graphs/HGNC_Automat/18d7d0e936fac5fe/neo4j.dump"
}