{
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    "@vocab": "https://schema.org/",
    "biolink": "https://w3id.org/biolink/",
    "orion": "https://github.com/RobokopU24/ORION"
  },
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  "@type": "Dataset",
  "name": "Pharos",
  "description": "Pharos is the openly accessible user interface to the Illuminating the Druggable Genome (IDG) program\u2019s Knowledge Management Center (KMC), which aims to develop a comprehensive, integrated knowledge-base for the Druggable Genome (DG) to illuminate the uncharacterized and/or poorly annotated portion of the DG, focusing on three of the most common drug-targeted protein families: G-protein-coupled receptors; ion channels; and kinases.",
  "url": "https://robokop.renci.org/graphs/PHAROS_Automat/a6022ac51591a48b/",
  "version": "a6022ac51591a48b",
  "dateCreated": "2026-02-05T13:05:42Z",
  "dateModified": "2026-02-05T13:05:42Z",
  "orion:buildVersion": "a6022ac51591a48b",
  "orion:biolinkVersion": "v4.3.6",
  "orion:babelVersion": "2025sep1",
  "hasPart": [
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      "name": "A ROBOKOP Knowledge Graph based on ",
      "orion:buildVersion": "8da27045e7034547",
      "orion:nodeCount": 299254,
      "orion:edgeCount": 667014
    },
    {
      "@id": "https://robokop.renci.org/graphs/OntologicalHierarchy/e855b13b685fa645/",
      "name": "A ROBOKOP Knowledge Graph based on ",
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      "orion:nodeCount": 42332,
      "orion:edgeCount": 568806
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  ],
  "isBasedOn": [
    {
      "@type": "Dataset",
      "identifier": "infores:pharos",
      "name": "Pharos",
      "description": "Pharos is the openly accessible user interface to the Illuminating the Druggable Genome (IDG) program's Knowledge Management Center (KMC), which aims to develop a comprehensive, integrated knowledge-base for the Druggable Genome (DG) to illuminate the uncharacterized and/or poorly annotated portion of the DG, focusing on three of the most commonly drug-targeted protein families: G-protein-coupled receptors; ion channels; and kinases.",
      "license": "Data accessed from Pharos and TCRD is publicly available from the primary sources listed above. Please respect their individual licenses regarding proper use and redistribution.",
      "url": "https://pharos.nih.gov/",
      "contentUrl": "https://pharos.nih.gov/",
      "citation": [
        "https://doi.org/10.1093/nar/gkac1033",
        "Sheils, T., Mathias, S. et al, \"TCRD and Pharos 2021: mining the human proteome for disease biology\", Nucl. Acids Res., 2021. DOI: 10.1093/nar/gkaa993"
      ],
      "version": "v6_13_4"
    },
    {
      "@type": "Dataset",
      "identifier": "infores:ubergraph",
      "name": "Ubergraph Subclass Relationships",
      "description": "Subclass relationships from the redundant version of Ubergraph.",
      "license": "https://raw.githubusercontent.com/INCATools/ubergraph/master/LICENSE.txt",
      "attribution": "https://github.com/INCATools/ubergraph",
      "url": "https://github.com/INCATools/ubergraph",
      "contentUrl": "https://github.com/INCATools/ubergraph",
      "citation": [
        "https://doi.org/10.5281/zenodo.7249759",
        "Balhoff, J. P., Bayindir, U., Caron, A. R., Matentzoglu, N., Osumi-Sutherland, D., & Mungall, C. J. (2022, September 28). Ubergraph: integrating OBO ontologies into a unified semantic graph. ICBO 2022: International Conference on Biomedical Ontology (ICBO), Ann Arbor, Michigan, USA."
      ],
      "version": "2025-11-02"
    }
  ],
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    "@id": "https://robokop.renci.org/graphs/PHAROS_Automat/a6022ac51591a48b/schema.json",
    "name": "RobokopKG Data Schema",
    "description": "JSON-LD Schema describing the contents of the knowledge graph",
    "encodingFormat": "application/ld+json"
  },
  "distribution": [
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      "@type": "DataDownload",
      "name": "nodes",
      "encodingFormat": "biolink:KGX",
      "contentUrl": "https://robokop.renci.org/graphs/PHAROS_Automat/a6022ac51591a48b/nodes.jsonl.gz"
    },
    {
      "@type": "DataDownload",
      "name": "edges",
      "encodingFormat": "biolink:KGX",
      "contentUrl": "https://robokop.renci.org/graphs/PHAROS_Automat/a6022ac51591a48b/edges.jsonl.gz"
    },
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      "@type": "DataDownload",
      "name": "graph-metadata",
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      "contentUrl": "https://robokop.renci.org/graphs/PHAROS_Automat/a6022ac51591a48b/graph-metadata.json"
    },
    {
      "@type": "DataDownload",
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    }
  ],
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      "@id": "https://w3id.org/biolink/",
      "name": "Biolink Model"
    },
    {
      "@id": "https://github.com/biolink/kgx/blob/master/docs/kgx_format.md",
      "name": "KGX Format"
    }
  ],
  "keywords": [
    "knowledge graph",
    "biomedical",
    "drug discovery",
    "translational research",
    "gene",
    "disease",
    "drug",
    "phenotype",
    "pathway"
  ],
  "creator": [
    {
      "@type": "Organization",
      "@id": "https://ror.org/0130frc33",
      "name": "Renaissance Computing Institute (RENCI)",
      "url": "https://renci.org"
    }
  ],
  "contactPoint": [
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      "@type": "ContactPoint",
      "contactType": "developer",
      "url": "https://github.com/RobokopU24/ORION/issues"
    }
  ],
  "funder": [
    {
      "@type": "Organization",
      "@id": "https://ror.org/05wvpxv85",
      "name": "National Center for Advancing Translational Sciences (NCATS)",
      "url": "https://ncats.nih.gov"
    },
    {
      "@type": "Organization",
      "@id": "https://ror.org/00j4k1h63",
      "name": "National Institute of Environmental Health Sciences (NIEHS)",
      "url": "https://www.niehs.nih.gov"
    },
    {
      "@type": "Organization",
      "@id": "https://ror.org/01cwqze88",
      "name": "National Institutes of Health (NIH)",
      "url": "https://www.nih.gov"
    }
  ],
  "license": "https://spdx.org/licenses/MIT"
}